Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016302
CDS Infomation

pacid=37475611 polypeptide=PGSC0003DMP400011296 locus=PGSC0003DMG400006368 ID=PGSC0003DMT400016302.v4.03 annot-version=v4.03
Sequence

ATGGCTAAAGAGATATTGAAAACACATGATACTATCTTTGCATCTCGTCCTGAATTAGCT
GCTGGTAAATACACTAGTTATTACTACTCAGACATGACATGGGCACCTTACGGTGCATAT
TGGCGTCAAGCTAGAAAAATCTACCTAACCGAGATATTTAGTCCCAAGAGGCTTGATTCA
TTTGAATATATCCGTGTTGAGGAAGGGCAAACTTTAATTTCTGGTCTTTTTCCTCTCTCA
GGAAAACCAGTTTTGCTTAAAGACCATTTACCTCGATTTACACTTCGCACTATAAGTAGG
TTGGTTATGAGTGACAAATATTATAGTAGTCATGCTTCATCAATAATAACACTTGAAACA
TTACAACAGATGCTCGATGAGTGGTTTATTCTTGGTGGGGTGATTAATATTGGGGATTGG
ATACCTTGGCTTAGTTGGTTCGACTTGCAAGGATACGTAAAGCAAATGAAGACTTTAGGG
AAAAATTTCAAAGAATTTTTCAAATATGTAATTGAAGATCACAAGGCAATAAAGACACAA
ATAGAAGAGGATTATGTTCCTAAGGACATGGTTGATACTTTGTTGCACCTTGCTGATGAC
CCTAATCTTGAAGTTAAGCTTACATCTGATAGGCTAATGGGATTAATGCATGATTTGATA
TCTGGTGGAACAGATACTTCAGCAGCAACAATAGAATGGGCATTTCAAGAACTTTTGAGG
CGACCAAACATCATGGACAAGGCACACCAAGAACTTGACAGAGCCATTGGAAAAGAACGA
TGGGTAGAAGAAGAAGACTTCTCTAAGCTTCCTTATATAGATGCCATAATTAAAGAGACA
TTTAGACTTCACCCTTTATGTGCATTGCTTCCTCCTCATTACTCCATTGAGGATTGTAAT
GTTGCTGGTTATGACATACCAAAAGGGACAATTGTTTATGTAAACGCATGGTCTTTAGGA
AGAAATCCAAAGTATTGGGATAGGGCAGAAGAGTTCATTCCAGAAAGATTCATAGAAAAT
AACATAGACATAAAAGGACAAAATTTTGCATTGTTGCCATTTGGTTCAGGAAGGAGGAGG
TGCCCGGGGTATAACCTTGGTATGAAGGTTGTTCGAACAACAATGGCTAACTTGTTGCAT
GGATTCAATTGGAAATTAGCAGGAGATATGAGGCCAGAAGATATAAGCATGGAGGAGATT
TATGGATTAACTACACACCCAAAAAAGCCTATATCTGTGATTATGGAACCTAGACTTCCC
TTCCATCTTTATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400011296
PEP Infomation

pacid=37475611 transcript=PGSC0003DMT400016302 locus=PGSC0003DMG400006368 ID=PGSC0003DMT400016302.v4.03 annot-version=v4.03
Sequence

MAKEILKTHDTIFASRPELAAGKYTSYYYSDMTWAPYGAYWRQARKIYLTEIFSPKRLDS
FEYIRVEEGQTLISGLFPLSGKPVLLKDHLPRFTLRTISRLVMSDKYYSSHASSIITLET
LQQMLDEWFILGGVINIGDWIPWLSWFDLQGYVKQMKTLGKNFKEFFKYVIEDHKAIKTQ
IEEDYVPKDMVDTLLHLADDPNLEVKLTSDRLMGLMHDLISGGTDTSAATIEWAFQELLR
RPNIMDKAHQELDRAIGKERWVEEEDFSKLPYIDAIIKETFRLHPLCALLPPHYSIEDCN
VAGYDIPKGTIVYVNAWSLGRNPKYWDRAEEFIPERFIENNIDIKGQNFALLPFGSGRRR
CPGYNLGMKVVRTTMANLLHGFNWKLAGDMRPEDISMEEIYGLTTHPKKPISVIMEPRLP
FHLY*

Transcript Sequence

Transcript ID

PGSC0003DMT400016302
Transcript Infomation

pacid=37475611 locus=PGSC0003DMG400006368 ID=PGSC0003DMT400016302.v4.03 annot-version=v4.03
Sequence

ATGGCTAAAGAGATATTGAAAACACATGATACTATCTTTGCATCTCGTCCTGAATTAGCT
GCTGGTAAATACACTAGTTATTACTACTCAGACATGACATGGGCACCTTACGGTGCATAT
TGGCGTCAAGCTAGAAAAATCTACCTAACCGAGATATTTAGTCCCAAGAGGCTTGATTCA
TTTGAATATATCCGTGTTGAGGAAGGGCAAACTTTAATTTCTGGTCTTTTTCCTCTCTCA
GGAAAACCAGTTTTGCTTAAAGACCATTTACCTCGATTTACACTTCGCACTATAAGTAGG
TTGGTTATGAGTGACAAATATTATAGTAGTCATGCTTCATCAATAATAACACTTGAAACA
TTACAACAGATGCTCGATGAGTGGTTTATTCTTGGTGGGGTGATTAATATTGGGGATTGG
ATACCTTGGCTTAGTTGGTTCGACTTGCAAGGATACGTAAAGCAAATGAAGACTTTAGGG
AAAAATTTCAAAGAATTTTTCAAATATGTAATTGAAGATCACAAGGCAATAAAGACACAA
ATAGAAGAGGATTATGTTCCTAAGGACATGGTTGATACTTTGTTGCACCTTGCTGATGAC
CCTAATCTTGAAGTTAAGCTTACATCTGATAGGCTAATGGGATTAATGCATGATTTGATA
TCTGGTGGAACAGATACTTCAGCAGCAACAATAGAATGGGCATTTCAAGAACTTTTGAGG
CGACCAAACATCATGGACAAGGCACACCAAGAACTTGACAGAGCCATTGGAAAAGAACGA
TGGGTAGAAGAAGAAGACTTCTCTAAGCTTCCTTATATAGATGCCATAATTAAAGAGACA
TTTAGACTTCACCCTTTATGTGCATTGCTTCCTCCTCATTACTCCATTGAGGATTGTAAT
GTTGCTGGTTATGACATACCAAAAGGGACAATTGTTTATGTAAACGCATGGTCTTTAGGA
AGAAATCCAAAGTATTGGGATAGGGCAGAAGAGTTCATTCCAGAAAGATTCATAGAAAAT
AACATAGACATAAAAGGACAAAATTTTGCATTGTTGCCATTTGGTTCAGGAAGGAGGAGG
TGCCCGGGGTATAACCTTGGTATGAAGGTTGTTCGAACAACAATGGCTAACTTGTTGCAT
GGATTCAATTGGAAATTAGCAGGAGATATGAGGCCAGAAGATATAAGCATGGAGGAGATT
TATGGATTAACTACACACCCAAAAAAGCCTATATCTGTGATTATGGAACCTAGACTTCCC
TTCCATCTTTATTAG