Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016279
CDS Infomation

pacid=37474872 polypeptide=PGSC0003DMP400011289 locus=PGSC0003DMG400006363 ID=PGSC0003DMT400016279.v4.03 annot-version=v4.03
Sequence

ATGGATAGGTATGAGAAAGTGCAGAAGCCAAGAATTGATAATCCTATTAAGGAGAATGAG
ATTAGAATAACAACACAAGGAAGATTAAGGAATTACATTACTTATGCTACTAATCTTCTT
CTTCAGGAGAAAGGATCTAAAGAAATTGCTCTTAAGTCTATGGGCAGAGCCATTAGCAAA
ACAGTAATGATAGCTGAATTAATAAAGAGGAAGATGGTTGGCCTTCATCAGATCACATCG
ATTGGTTCAACTGATATCACTGATACGTGGGAACCTTTAGAAGAAGGACTTCTTCCGCTC
GAGACTACTCGTCATGTGTCCGTCATAACAATTATCCTTTCAAAGGAGGAGTTAGATACC
TCATCAGCCGGGTATCAGCCACCTATTCCAGCAGATCAAGTCAGACCACTGACCGAACAT
GATTATGGAGGAGGGCGTTTTAATGATGGTGTGCCTGGAAATGGTGGAGAGGGCGGATGG
AAAGGAGGTCGTGGATATAATGGTAGAGGCCGAACTGGAGGAAGAGGTCGTGGTAATCGT
GGACGTGGTAACAACTATGGTGCAGTAGCTGGTTCAATGCCCATTCAAGGCCAGGGTCGG
GGCCAAGGCCAAGGACAGGGACAAGTACAGGGACGAGGTAGAGGTCGTGCTCAGGCTACT
AAATCAAATGATCCTGTTCGGGCATCAGTTGCTTATGTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400011289
PEP Infomation

pacid=37474872 transcript=PGSC0003DMT400016279 locus=PGSC0003DMG400006363 ID=PGSC0003DMT400016279.v4.03 annot-version=v4.03
Sequence

MDRYEKVQKPRIDNPIKENEIRITTQGRLRNYITYATNLLLQEKGSKEIALKSMGRAISK
TVMIAELIKRKMVGLHQITSIGSTDITDTWEPLEEGLLPLETTRHVSVITIILSKEELDT
SSAGYQPPIPADQVRPLTEHDYGGGRFNDGVPGNGGEGGWKGGRGYNGRGRTGGRGRGNR
GRGNNYGAVAGSMPIQGQGRGQGQGQGQVQGRGRGRAQATKSNDPVRASVAYV*

Transcript Sequence

Transcript ID

PGSC0003DMT400016279
Transcript Infomation

pacid=37474872 locus=PGSC0003DMG400006363 ID=PGSC0003DMT400016279.v4.03 annot-version=v4.03
Sequence

ATGGATAGGTATGAGAAAGTGCAGAAGCCAAGAATTGATAATCCTATTAAGGAGAATGAG
ATTAGAATAACAACACAAGGAAGATTAAGGAATTACATTACTTATGCTACTAATCTTCTT
CTTCAGGAGAAAGGATCTAAAGAAATTGCTCTTAAGTCTATGGGCAGAGCCATTAGCAAA
ACAGTAATGATAGCTGAATTAATAAAGAGGAAGATGGTTGGCCTTCATCAGATCACATCG
ATTGGTTCAACTGATATCACTGATACGTGGGAACCTTTAGAAGAAGGACTTCTTCCGCTC
GAGACTACTCGTCATGTGTCCGTCATAACAATTATCCTTTCAAAGGAGGAGTTAGATACC
TCATCAGCCGGGTATCAGCCACCTATTCCAGCAGATCAAGTCAGACCACTGACCGAACAT
GATTATGGAGGAGGGCGTTTTAATGATGGTGTGCCTGGAAATGGTGGAGAGGGCGGATGG
AAAGGAGGTCGTGGATATAATGGTAGAGGCCGAACTGGAGGAAGAGGTCGTGGTAATCGT
GGACGTGGTAACAACTATGGTGCAGTAGCTGGTTCAATGCCCATTCAAGGCCAGGGTCGG
GGCCAAGGCCAAGGACAGGGACAAGTACAGGGACGAGGTAGAGGTCGTGCTCAGGCTACT
AAATCAAATGATCCTGTTCGGGCATCAGTTGCTTATGTCTGA