Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016260
CDS Infomation

pacid=37474033 polypeptide=PGSC0003DMP400011271 locus=PGSC0003DMG400006353 ID=PGSC0003DMT400016260.v4.03 annot-version=v4.03
Sequence

ATGTCGTCGAAGAAGAGAGTAAGGCATGGTTTCAGTGGCTATGAATTTCCTGTTATACCA
AAAGCTCCTAGATCAGTTAGAAGGAGACACTCGCACAACAATATAGACAATGATCAAATT
TGTGCATTTGAATTACTGGCGGCTGTTGCTGGTGAACTATTACAGGAAAGCGAAAGCTCT
GCTTGTAGTAATGCAGCGGTAGGAAAAGATGAGCTCTCCGATTGCAGGGAAGTTGTGAAA
CGTGAGCAACTCAAAGAAGATAAAGCTGTGAAATCAGAGTGCTTTGACCAGGGGAGTTGT
GTCGAAAGCGCTCATCTACCGGAACCTGCAGTGCAAGAGCCGAATCTCAAGTATAGTTTG
GATAAACCTTATCATATAGAAAATAACATTTTTCACACTGAAGTAGAAGGTGGATCCTCT
AATCTTGAGGATGTCTGTGACAAGAGAACTGATACAGGTACTCAAAAACAGCTAACTGAT
GACGGCAAGCAGACTGAAGACTTAACTGTGGCTAACTCTTGCAGTGTGAAGGGTCCAATT
GAGAAACATGTGAATAACAATTCCGCAATTAACTCAGACAGTAGTGTACAGTTGCCCTGG
TACAGGGCGGTTCCTAGGCCTTCTTTTGGAAAGCAAAGGAACAATGTTAAGTTAGGTATT
AGAGATGATGACGAAAATTCTTTTGGATCTTATCGACACAACACAAACATAAGAGCCTTC
AGGCAAACATCACGTATTGGATACAAAAGTATGAGAAAGATGTTGACTTCTAGACGCTGG
AAAGTAGCTCCTCAGTTGAAGGCCGGGGAACGTTCGTGCTCCAAATATGGAATGAAGTCC
TTTCACAGAAACAGGAAAAGAGTATGTGCACTAGAAAGATGCCGATTTGAAATTCCATCA
AAGAGAAGGAAATTGTGTCACTATAGCTCGGTTGTCGCTTATGATCAGCAGGCCAATAGT
AAAAGCATTTCAAACTCACCTGAAAAGGGAATCAAGAGAGACATTACAGGAGCGGGGGCT
TCAGCTTCAGTCAGAAATCATCGAAAGAAGGATTCTAATGTAAAATTTAGCATCAAGTCA
TTCAAAGTGCCAGAGCTTTTCATCGAGGTCCCTGAAAATGAAACTGTTGGTTCCCTGAAG
AGGACAGTAATGGAGGCTGTAAAAACTATTCTGGGAAGTGGATTGCGTGTCGGTATGGTT
GTCCAGGGGAAGAAGGTCAGAGATGACAATAAAACTCTACAGCAGGCTGGTATCTCTCAG
AGTGGAAACCTCGATACTTTGGGTTTTACGTTGGAGCCAAGTTCTTATCCAGTTTCTCCA
TCGTTGCATTCTAAAGATCTTCCTGCTTTGTCACCATATGTTGCTGATCATGAACTAACT
CGGCGGCCACCTAGTCCAATCATGGAGTTAGAGCTTCCAAGTTCTCCGTCGGCTCCTTCA
GAGACTAGGTTGGACGAGCATGATGAAGATTACCATGAATTGGCGCTATCACCTACAAAT
CCTATTGATCCACCAACTGATGTAGCTATTTCTGGTTCTAGAGCCTTGGTCGTTGTTTCT
CCTCTGAATGCTGAGGCACATCCGGTGGTTCCCATGAACCCAAAAAATAGATGTTCTGAA
CTTTCACAACGTAGAACAAGGAGACCGTTCTCAGTCGCAGAAGTAGAAGCGCTAGTTGAA
GCTGTGGAGCAGCTTGGAACTGGAAGATGGCGGGACGTCAAAATCTGTGCTTTTGAGTAT
GCTGACCATCGAACTTATGTTGACGTGAAGGATAAATGGAAGACATTAGTCCATACAGCA
AGCATTGCCCCACAGCAAAGAAGGGGAGAGCCGGTACCACAGGAGCTTCTGGACAGGGTC
TTAATTGCCCATGACTACTGGTCTAAGCAACATGGGAAGCATCAAGCTGAACCTTCAAAA
ATGACCGAGGCTCAGATGCAGAACGTTGGCGCTTTAGAGAACAACAACAATTCCGTCTCA
ATGCCAAGCAAGATGGTCGGGTCAGCTATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400011271
PEP Infomation

pacid=37474033 transcript=PGSC0003DMT400016260 locus=PGSC0003DMG400006353 ID=PGSC0003DMT400016260.v4.03 annot-version=v4.03
Sequence

MSSKKRVRHGFSGYEFPVIPKAPRSVRRRHSHNNIDNDQICAFELLAAVAGELLQESESS
ACSNAAVGKDELSDCREVVKREQLKEDKAVKSECFDQGSCVESAHLPEPAVQEPNLKYSL
DKPYHIENNIFHTEVEGGSSNLEDVCDKRTDTGTQKQLTDDGKQTEDLTVANSCSVKGPI
EKHVNNNSAINSDSSVQLPWYRAVPRPSFGKQRNNVKLGIRDDDENSFGSYRHNTNIRAF
RQTSRIGYKSMRKMLTSRRWKVAPQLKAGERSCSKYGMKSFHRNRKRVCALERCRFEIPS
KRRKLCHYSSVVAYDQQANSKSISNSPEKGIKRDITGAGASASVRNHRKKDSNVKFSIKS
FKVPELFIEVPENETVGSLKRTVMEAVKTILGSGLRVGMVVQGKKVRDDNKTLQQAGISQ
SGNLDTLGFTLEPSSYPVSPSLHSKDLPALSPYVADHELTRRPPSPIMELELPSSPSAPS
ETRLDEHDEDYHELALSPTNPIDPPTDVAISGSRALVVVSPLNAEAHPVVPMNPKNRCSE
LSQRRTRRPFSVAEVEALVEAVEQLGTGRWRDVKICAFEYADHRTYVDVKDKWKTLVHTA
SIAPQQRRGEPVPQELLDRVLIAHDYWSKQHGKHQAEPSKMTEAQMQNVGALENNNNSVS
MPSKMVGSAI*

Transcript Sequence

Transcript ID

PGSC0003DMT400016260
Transcript Infomation

pacid=37474033 locus=PGSC0003DMG400006353 ID=PGSC0003DMT400016260.v4.03 annot-version=v4.03
Sequence

ATGTCGTCGAAGAAGAGAGTAAGGCATGGTTTCAGTGGCTATGAATTTCCTGTTATACCA
AAAGCTCCTAGATCAGTTAGAAGGAGACACTCGCACAACAATATAGACAATGATCAAATT
TGTGCATTTGAATTACTGGCGGCTGTTGCTGGTGAACTATTACAGGAAAGCGAAAGCTCT
GCTTGTAGTAATGCAGCGGTAGGAAAAGATGAGCTCTCCGATTGCAGGGAAGTTGTGAAA
CGTGAGCAACTCAAAGAAGATAAAGCTGTGAAATCAGAGTGCTTTGACCAGGGGAGTTGT
GTCGAAAGCGCTCATCTACCGGAACCTGCAGTGCAAGAGCCGAATCTCAAGTATAGTTTG
GATAAACCTTATCATATAGAAAATAACATTTTTCACACTGAAGTAGAAGGTGGATCCTCT
AATCTTGAGGATGTCTGTGACAAGAGAACTGATACAGGTACTCAAAAACAGCTAACTGAT
GACGGCAAGCAGACTGAAGACTTAACTGTGGCTAACTCTTGCAGTGTGAAGGGTCCAATT
GAGAAACATGTGAATAACAATTCCGCAATTAACTCAGACAGTAGTGTACAGTTGCCCTGG
TACAGGGCGGTTCCTAGGCCTTCTTTTGGAAAGCAAAGGAACAATGTTAAGTTAGGTATT
AGAGATGATGACGAAAATTCTTTTGGATCTTATCGACACAACACAAACATAAGAGCCTTC
AGGCAAACATCACGTATTGGATACAAAAGTATGAGAAAGATGTTGACTTCTAGACGCTGG
AAAGTAGCTCCTCAGTTGAAGGCCGGGGAACGTTCGTGCTCCAAATATGGAATGAAGTCC
TTTCACAGAAACAGGAAAAGAGTATGTGCACTAGAAAGATGCCGATTTGAAATTCCATCA
AAGAGAAGGAAATTGTGTCACTATAGCTCGGTTGTCGCTTATGATCAGCAGGCCAATAGT
AAAAGCATTTCAAACTCACCTGAAAAGGGAATCAAGAGAGACATTACAGGAGCGGGGGCT
TCAGCTTCAGTCAGAAATCATCGAAAGAAGGATTCTAATGTAAAATTTAGCATCAAGTCA
TTCAAAGTGCCAGAGCTTTTCATCGAGGTCCCTGAAAATGAAACTGTTGGTTCCCTGAAG
AGGACAGTAATGGAGGCTGTAAAAACTATTCTGGGAAGTGGATTGCGTGTCGGTATGGTT
GTCCAGGGGAAGAAGGTCAGAGATGACAATAAAACTCTACAGCAGGCTGGTATCTCTCAG
AGTGGAAACCTCGATACTTTGGGTTTTACGTTGGAGCCAAGTTCTTATCCAGTTTCTCCA
TCGTTGCATTCTAAAGATCTTCCTGCTTTGTCACCATATGTTGCTGATCATGAACTAACT
CGGCGGCCACCTAGTCCAATCATGGAGTTAGAGCTTCCAAGTTCTCCGTCGGCTCCTTCA
GAGACTAGGTTGGACGAGCATGATGAAGATTACCATGAATTGGCGCTATCACCTACAAAT
CCTATTGATCCACCAACTGATGTAGCTATTTCTGGTTCTAGAGCCTTGGTCGTTGTTTCT
CCTCTGAATGCTGAGGCACATCCGGTGGTTCCCATGAACCCAAAAAATAGATGTTCTGAA
CTTTCACAACGTAGAACAAGGAGACCGTTCTCAGTCGCAGAAGTAGAAGCGCTAGTTGAA
GCTGTGGAGCAGCTTGGAACTGGAAGATGGCGGGACGTCAAAATCTGTGCTTTTGAGTAT
GCTGACCATCGAACTTATGTTGACGTGAAGGATAAATGGAAGACATTAGTCCATACAGCA
AGCATTGCCCCACAGCAAAGAAGGGGAGAGCCGGTACCACAGGAGCTTCTGGACAGGGTC
TTAATTGCCCATGACTACTGGTCTAAGCAACATGGGAAGCATCAAGCTGAACCTTCAAAA
ATGACCGAGGCTCAGATGCAGAACGTTGGCGCTTTAGAGAACAACAACAATTCCGTCTCA
ATGCCAAGCAAGATGGTCGGGTCAGCTATATGA