Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016188
CDS Infomation

pacid=37437375 polypeptide=PGSC0003DMP400011221 locus=PGSC0003DMG400006327 ID=PGSC0003DMT400016188.v4.03 annot-version=v4.03
Sequence

ATGGGAAGAGAGAAACGAGCTTGTCAAGGTAAACAACACTTCAGCCATCCACACATCTTG
AAACCAATTGTGAATCCAACTGAAACTCTCTTTTGCAATGCTTGTGAGCAACCAAACATT
ACTAGTAATTTCTATGGCTGCAATACCTGCCAATATTTCCTCCACCAAAACTGCCTCAAC
GCTCCGCGTTTTCTTGATCATTCTTGTCATCCTTCTCACCACTTGACTCTTCTCCCAATT
CCGACTTACTCGAATCGTTCTTACACTTGCAAGGCTTGTGCCTCTGCTGGAAATGGTTTT
AGTTTTAGCTGTGCATGTTGCGAATTCGATGTCCACATGCACTGTGCTCTTTTGCCCCAA
ACTGTCTTCCTGTCCCAGCACCATCATCATGATCTTGAGCTCATATTTGAATCCCCTTTT
TATGATGATGCCGATGATGAAAGCACCGTTTTTGTTTGTGATCTCTGTCGCGACAATGTA
GATCTTAATAACTGGTTGTATTATTGTTCTGATTGTGATTTTGGTACACATCTCGAATGT
GCCATTTCCAAATCTGTCAGCCAACAAGAACGTCCGAAACTGTTGGGCAACAAACCAAGA
GAAAATCCAGTAGTAATCAGGAAAACAGAGGAGGTACCCATCAAGAACGAAAAAGAAATC
AATCAAGAAGAAGAGGCAGAGGAAGAAGAAGAAGTAGAAGAAGAGGAAGCAGAAGCGGAA
GACGAAGAAGAGGAGGAAGAAGAAGCAGAAGAAGAGGAAGCAGAAGCTGAAGCGGAAGAT
GAAGAGGAAGAGAAGGAAGAGGAGGAACTCAATTATCCAAGATCAATTCTTATTGACAAA
CATCAACATGAGTTGGAGCTCTGCTTTGGTTCTCCGTACGAAGATAAGGATACTCTATTT
GCTTGTGATATCTGCAGTATCATAATGGACTCGGACGAATCTTTGTACTATTGCGCTGAT
TGTGATTTCGTGTTGCACTTGGAATGTGCATCTCCTGATGCTGATGTTTCCCCCACATTA
CAGCAGCATCGAAATCCAAATTATCCAATTCCAAATCCAAATCGAACAGTGGAGATGATA
AATTATGTGACGAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400011221
PEP Infomation

pacid=37437375 transcript=PGSC0003DMT400016188 locus=PGSC0003DMG400006327 ID=PGSC0003DMT400016188.v4.03 annot-version=v4.03
Sequence

MGREKRACQGKQHFSHPHILKPIVNPTETLFCNACEQPNITSNFYGCNTCQYFLHQNCLN
APRFLDHSCHPSHHLTLLPIPTYSNRSYTCKACASAGNGFSFSCACCEFDVHMHCALLPQ
TVFLSQHHHHDLELIFESPFYDDADDESTVFVCDLCRDNVDLNNWLYYCSDCDFGTHLEC
AISKSVSQQERPKLLGNKPRENPVVIRKTEEVPIKNEKEINQEEEAEEEEEVEEEEAEAE
DEEEEEEEAEEEEAEAEAEDEEEEKEEEELNYPRSILIDKHQHELELCFGSPYEDKDTLF
ACDICSIIMDSDESLYYCADCDFVLHLECASPDADVSPTLQQHRNPNYPIPNPNRTVEMI
NYVTN*

Transcript Sequence

Transcript ID

PGSC0003DMT400016188
Transcript Infomation

pacid=37437375 locus=PGSC0003DMG400006327 ID=PGSC0003DMT400016188.v4.03 annot-version=v4.03
Sequence

ATGGGAAGAGAGAAACGAGCTTGTCAAGGTAAACAACACTTCAGCCATCCACACATCTTG
AAACCAATTGTGAATCCAACTGAAACTCTCTTTTGCAATGCTTGTGAGCAACCAAACATT
ACTAGTAATTTCTATGGCTGCAATACCTGCCAATATTTCCTCCACCAAAACTGCCTCAAC
GCTCCGCGTTTTCTTGATCATTCTTGTCATCCTTCTCACCACTTGACTCTTCTCCCAATT
CCGACTTACTCGAATCGTTCTTACACTTGCAAGGCTTGTGCCTCTGCTGGAAATGGTTTT
AGTTTTAGCTGTGCATGTTGCGAATTCGATGTCCACATGCACTGTGCTCTTTTGCCCCAA
ACTGTCTTCCTGTCCCAGCACCATCATCATGATCTTGAGCTCATATTTGAATCCCCTTTT
TATGATGATGCCGATGATGAAAGCACCGTTTTTGTTTGTGATCTCTGTCGCGACAATGTA
GATCTTAATAACTGGTTGTATTATTGTTCTGATTGTGATTTTGGTACACATCTCGAATGT
GCCATTTCCAAATCTGTCAGCCAACAAGAACGTCCGAAACTGTTGGGCAACAAACCAAGA
GAAAATCCAGTAGTAATCAGGAAAACAGAGGAGGTACCCATCAAGAACGAAAAAGAAATC
AATCAAGAAGAAGAGGCAGAGGAAGAAGAAGAAGTAGAAGAAGAGGAAGCAGAAGCGGAA
GACGAAGAAGAGGAGGAAGAAGAAGCAGAAGAAGAGGAAGCAGAAGCTGAAGCGGAAGAT
GAAGAGGAAGAGAAGGAAGAGGAGGAACTCAATTATCCAAGATCAATTCTTATTGACAAA
CATCAACATGAGTTGGAGCTCTGCTTTGGTTCTCCGTACGAAGATAAGGATACTCTATTT
GCTTGTGATATCTGCAGTATCATAATGGACTCGGACGAATCTTTGTACTATTGCGCTGAT
TGTGATTTCGTGTTGCACTTGGAATGTGCATCTCCTGATGCTGATGTTTCCCCCACATTA
CAGCAGCATCGAAATCCAAATTATCCAATTCCAAATCCAAATCGAACAGTGGAGATGATA
AATTATGTGACGAATTAA