Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016171
CDS Infomation

pacid=37439301 polypeptide=PGSC0003DMP400011213 locus=PGSC0003DMG400006319 ID=PGSC0003DMT400016171.v4.03 annot-version=v4.03
Sequence

ATGGCTTTTCAAGGTTCATTTTGGGCAATTAGCCTTTTGATATTTTTGGCCAATTTTTTG
TCTATGATAGAGTTTTCTTTGGCTGCAAATGCAAAAGTGCCAAGCCATACTATTTCTAAT
CCATTTAATCGTACTATATTTTCACCTGATTTTCTTTTTGGAGCTTCCACTTCTTCCTAT
CAGTATGAAGGTGCATGGAATGAAGATGGCAAAGGGCCAAGTATTGTGGATACTTTCGTC
CACACTCATCCTGAAAAAATATTGGACCGTAGCAATGGAGACATAGCTCTGGACTTTTAT
CATCGTTACAAGGAGGACGTGAAACTAGCAAAATTTGAAGGACTGGATGCTTTCAGGATT
TCTATTGCATGGACAAGAATTTTACCAGAGGGTCAGGTTAAAAAAGGAGTAAATCAAGCT
GGTATTGACCACTACAACAGTCTCATAAATGAGATTGTAGCCCTTGGTATTAAACCTCTA
GTGACACTTTTTCATTGGGATCTTCCTCAAGCCCTTGAAGATGAATATCTTGGCTTTCTA
AGCCGTAAGATCGTAGATGATTACGTAGATTTTGTGGAGATTTGTTTCAAAAATTTTGGT
GATAGAGTGAAGTTGTGGGCAACGATGAATGAGCCATGGATTTTTACATCAACGGGTTAT
GATTCGGGTTCTTTGGCACCTGGACGGTGTTCTGCGTGGATGAACAGTAACTGCACCATC
GGAAACTCTGGTACTGAGCCTTATATAGCCGGACACAATATACTTCTTGCTCATGCTGCT
GCTTCCAAACTATACAGAAAAAAATACAAGCCAATTCAAAAGGGTCAAATAGGAACAATT
GTAGTGTCACATTGGTTCGAGCCTGCCTCCAACAAACCACAGGATAAAAAAGCATCTATA
AGGGCTCTTGATTTTATGCTTGGATGGTTTATGCACCCATTGACTTATGGAGATTATCCA
ATAAGTATGAGAAAACTTGTTGGCAAGAGATTACCAAAGTTTACCCCAAAAGAATCAATG
TTGGTGAAAGACTCATGTGATTTTATAGGATTGAATTATTACACCTCTAATTTTGCAGCT
CATATTTCTAATCCACCAAATACTGTCAATATCAGTTCAGGAACTGATAATCTAGTCAAT
CAAACCACATCGCGAAACGGAAAGTTGATTGGTGATCCAACTGGTGTGAGTATATTCTAT
GTTGCTCCAAAGGGACTTTATAAGCTTCTTGTTTATATTAAGAAATTTTACAAGAATCCA
ATTGTTTACATCACAGAATGCGGAATGGGTGAGTCCAATATTGATGATGTTGCAAAAGGT
ATCAATGATGCTCAGAGGGTTGATTTCTACCAACGCCATATTAAGGCTCTTTATAGGGCT
TTTAGGGAGGGAGTACATGTTAAGGGGTTCTTTGCATGGTCATTTTTTGACAACTTTGAA
TGGGGATCAGGATACACACAGAGATTTGGCATCAATTTTGTAGATTACAAGAATAACTTA
AAGAGATACCCCAAGCGTTCTGCTCTTTGGATGAAGAAATTTCTTCTCAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400011213
PEP Infomation

pacid=37439301 transcript=PGSC0003DMT400016171 locus=PGSC0003DMG400006319 ID=PGSC0003DMT400016171.v4.03 annot-version=v4.03
Sequence

MAFQGSFWAISLLIFLANFLSMIEFSLAANAKVPSHTISNPFNRTIFSPDFLFGASTSSY
QYEGAWNEDGKGPSIVDTFVHTHPEKILDRSNGDIALDFYHRYKEDVKLAKFEGLDAFRI
SIAWTRILPEGQVKKGVNQAGIDHYNSLINEIVALGIKPLVTLFHWDLPQALEDEYLGFL
SRKIVDDYVDFVEICFKNFGDRVKLWATMNEPWIFTSTGYDSGSLAPGRCSAWMNSNCTI
GNSGTEPYIAGHNILLAHAAASKLYRKKYKPIQKGQIGTIVVSHWFEPASNKPQDKKASI
RALDFMLGWFMHPLTYGDYPISMRKLVGKRLPKFTPKESMLVKDSCDFIGLNYYTSNFAA
HISNPPNTVNISSGTDNLVNQTTSRNGKLIGDPTGVSIFYVAPKGLYKLLVYIKKFYKNP
IVYITECGMGESNIDDVAKGINDAQRVDFYQRHIKALYRAFREGVHVKGFFAWSFFDNFE
WGSGYTQRFGINFVDYKNNLKRYPKRSALWMKKFLLK*

Transcript Sequence

Transcript ID

PGSC0003DMT400016171
Transcript Infomation

pacid=37439301 locus=PGSC0003DMG400006319 ID=PGSC0003DMT400016171.v4.03 annot-version=v4.03
Sequence

ATGGCTTTTCAAGGTTCATTTTGGGCAATTAGCCTTTTGATATTTTTGGCCAATTTTTTG
TCTATGATAGAGTTTTCTTTGGCTGCAAATGCAAAAGTGCCAAGCCATACTATTTCTAAT
CCATTTAATCGTACTATATTTTCACCTGATTTTCTTTTTGGAGCTTCCACTTCTTCCTAT
CAGTATGAAGGTGCATGGAATGAAGATGGCAAAGGGCCAAGTATTGTGGATACTTTCGTC
CACACTCATCCTGAAAAAATATTGGACCGTAGCAATGGAGACATAGCTCTGGACTTTTAT
CATCGTTACAAGGAGGACGTGAAACTAGCAAAATTTGAAGGACTGGATGCTTTCAGGATT
TCTATTGCATGGACAAGAATTTTACCAGAGGGTCAGGTTAAAAAAGGAGTAAATCAAGCT
GGTATTGACCACTACAACAGTCTCATAAATGAGATTGTAGCCCTTGGTATTAAACCTCTA
GTGACACTTTTTCATTGGGATCTTCCTCAAGCCCTTGAAGATGAATATCTTGGCTTTCTA
AGCCGTAAGATCGTAGATGATTACGTAGATTTTGTGGAGATTTGTTTCAAAAATTTTGGT
GATAGAGTGAAGTTGTGGGCAACGATGAATGAGCCATGGATTTTTACATCAACGGGTTAT
GATTCGGGTTCTTTGGCACCTGGACGGTGTTCTGCGTGGATGAACAGTAACTGCACCATC
GGAAACTCTGGTACTGAGCCTTATATAGCCGGACACAATATACTTCTTGCTCATGCTGCT
GCTTCCAAACTATACAGAAAAAAATACAAGCCAATTCAAAAGGGTCAAATAGGAACAATT
GTAGTGTCACATTGGTTCGAGCCTGCCTCCAACAAACCACAGGATAAAAAAGCATCTATA
AGGGCTCTTGATTTTATGCTTGGATGGTTTATGCACCCATTGACTTATGGAGATTATCCA
ATAAGTATGAGAAAACTTGTTGGCAAGAGATTACCAAAGTTTACCCCAAAAGAATCAATG
TTGGTGAAAGACTCATGTGATTTTATAGGATTGAATTATTACACCTCTAATTTTGCAGCT
CATATTTCTAATCCACCAAATACTGTCAATATCAGTTCAGGAACTGATAATCTAGTCAAT
CAAACCACATCGCGAAACGGAAAGTTGATTGGTGATCCAACTGGTGTGAGTATATTCTAT
GTTGCTCCAAAGGGACTTTATAAGCTTCTTGTTTATATTAAGAAATTTTACAAGAATCCA
ATTGTTTACATCACAGAATGCGGAATGGGTGAGTCCAATATTGATGATGTTGCAAAAGGT
ATCAATGATGCTCAGAGGGTTGATTTCTACCAACGCCATATTAAGGCTCTTTATAGGGCT
TTTAGGGAGGGAGTACATGTTAAGGGGTTCTTTGCATGGTCATTTTTTGACAACTTTGAA
TGGGGATCAGGATACACACAGAGATTTGGCATCAATTTTGTAGATTACAAGAATAACTTA
AAGAGATACCCCAAGCGTTCTGCTCTTTGGATGAAGAAATTTCTTCTCAAATAA