Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016150
CDS Infomation

pacid=37436158 polypeptide=PGSC0003DMP400011199 locus=PGSC0003DMG400006312 ID=PGSC0003DMT400016150.v4.03 annot-version=v4.03
Sequence

ATGATCTTCGTAGCTGGAGCTCCTTTAAGTACAGATTCGTCTTCTTCATGTTCCCAGGGA
CATGACATCCTGACGGATTTGATGAAGCATCCTGTTCTGGTATCTGCATCGTCTTCACTT
AATGATGTTGCAGAAAGGAAATTCTCTGTCTCTAAAGATTCTAGTTCTGGTATATCAAGA
CATAATAGATGGGTTTACATTTTCCAGAGAGAATATGCAACGGTGGATCCTGCACTTGTC
GATGTGGTTGGGACGGATGAGGCAACAACTTGCGTAGGCCTTGTCATAAGGAACCAAAAC
AGTGGAATGACATCTGTTGCTCACTTGGATTCACCAGATGTTGTTGATATTGGCCTGGCC
CAGATGCTGGCTTTTGTTGTCAATCAAAGCTCTGATGCCATGTTGGATGTTCATCTAATT
GGTGGTTTTGATGATGCCTCGCCTGAAAATGTTAATGGTATTACAGAAAGTCACGGAAAG
TTGGAGGGCTATTCCTTTCCTTTGTGTAAGAAAATAGTTGACAGCCTGGCAAAGAGTAAT
ATGAAGTTCCAGATTCACACACTCCATGTTCTTGGGCATAATACAAGACGAGATACTGAA
GGAAATGCATACCCCATCTTCACTGGTTTCCTGGCGGAAACTGCCACTGGGTCTATTATC
CCGGCAAACTTTGATGCAACAACAAGATGTCCCGACGAAGTTGTTAGGAGAATACGAGTG
TCTGCATCTTTTGAGGATCCAAGTTGGAAAGGAAGATTACTTGAGACATATGATACTCAG
ACTGATCAATTCGTGATTGCTCCATGCACTTGGGACATGCGCAAGATGCATATTGCCCTC
ATGTTACAGAATTTATCTGACCAGGAAATCCTTCTTACGTGTTCCACCTCTCCTTCTGCT
GAGGCTCCAGATTTCGTGGATAACCAAAGAAGGCAGTGGGACTATTTAATCCAACACCCA
GATTGGAGTGAAACATTCCCTTTCAAAAAGCCACGTATATTTCAAAGGACAGAAGATAAG
AGTTGGGTGAGGCACCAAGCAAAATCTAGCAGCTCATCTTATCCATACGCTGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400011199
PEP Infomation

pacid=37436158 transcript=PGSC0003DMT400016150 locus=PGSC0003DMG400006312 ID=PGSC0003DMT400016150.v4.03 annot-version=v4.03
Sequence

MIFVAGAPLSTDSSSSCSQGHDILTDLMKHPVLVSASSSLNDVAERKFSVSKDSSSGISR
HNRWVYIFQREYATVDPALVDVVGTDEATTCVGLVIRNQNSGMTSVAHLDSPDVVDIGLA
QMLAFVVNQSSDAMLDVHLIGGFDDASPENVNGITESHGKLEGYSFPLCKKIVDSLAKSN
MKFQIHTLHVLGHNTRRDTEGNAYPIFTGFLAETATGSIIPANFDATTRCPDEVVRRIRV
SASFEDPSWKGRLLETYDTQTDQFVIAPCTWDMRKMHIALMLQNLSDQEILLTCSTSPSA
EAPDFVDNQRRQWDYLIQHPDWSETFPFKKPRIFQRTEDKSWVRHQAKSSSSSYPYAD*

Transcript Sequence

Transcript ID

PGSC0003DMT400016150
Transcript Infomation

pacid=37436158 locus=PGSC0003DMG400006312 ID=PGSC0003DMT400016150.v4.03 annot-version=v4.03
Sequence

ATGATCTTCGTAGCTGGAGCTCCTTTAAGTACAGATTCGTCTTCTTCATGTTCCCAGGGA
CATGACATCCTGACGGATTTGATGAAGCATCCTGTTCTGGTATCTGCATCGTCTTCACTT
AATGATGTTGCAGAAAGGAAATTCTCTGTCTCTAAAGATTCTAGTTCTGGTATATCAAGA
CATAATAGATGGGTTTACATTTTCCAGAGAGAATATGCAACGGTGGATCCTGCACTTGTC
GATGTGGTTGGGACGGATGAGGCAACAACTTGCGTAGGCCTTGTCATAAGGAACCAAAAC
AGTGGAATGACATCTGTTGCTCACTTGGATTCACCAGATGTTGTTGATATTGGCCTGGCC
CAGATGCTGGCTTTTGTTGTCAATCAAAGCTCTGATGCCATGTTGGATGTTCATCTAATT
GGTGGTTTTGATGATGCCTCGCCTGAAAATGTTAATGGTATTACAGAAAGTCACGGAAAG
TTGGAGGGCTATTCCTTTCCTTTGTGTAAGAAAATAGTTGACAGCCTGGCAAAGAGTAAT
ATGAAGTTCCAGATTCACACACTCCATGTTCTTGGGCATAATACAAGACGAGATACTGAA
GGAAATGCATACCCCATCTTCACTGGTTTCCTGGCGGAAACTGCCACTGGGTCTATTATC
CCGGCAAACTTTGATGCAACAACAAGATGTCCCGACGAAGTTGTTAGGAGAATACGAGTG
TCTGCATCTTTTGAGGATCCAAGTTGGAAAGGAAGATTACTTGAGACATATGATACTCAG
ACTGATCAATTCGTGATTGCTCCATGCACTTGGGACATGCGCAAGATGCATATTGCCCTC
ATGTTACAGAATTTATCTGACCAGGAAATCCTTCTTACGTGTTCCACCTCTCCTTCTGCT
GAGGCTCCAGATTTCGTGGATAACCAAAGAAGGCAGTGGGACTATTTAATCCAACACCCA
GATTGGAGTGAAACATTCCCTTTCAAAAAGCCACGTATATTTCAAAGGACAGAAGATAAG
AGTTGGGTGAGGCACCAAGCAAAATCTAGCAGCTCATCTTATCCATACGCTGATTAA