Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016146
CDS Infomation

pacid=37440525 polypeptide=PGSC0003DMP400011195 locus=PGSC0003DMG400006311 ID=PGSC0003DMT400016146.v4.03 annot-version=v4.03
Sequence

ATGGAGCTTGGATTAAGCTTAGGAGATGCTAAGACAAACAATACAACAAACTCTTCTCCA
AAATCATTTTTCTTGTGTAAGAAAAATGTTATTTCTACTTGTAATGATCATGAGAAGAAA
AAAAGTTTAGGGTTTTGCATGGCTTTAGGAATTAACTCATCAAGTGAAAGAGTAGAACAA
GATGAAGATGATGAAGAAAATAATACTTCTGAAGAAGGCACTAATAATACTCTACCAGTT
CAGCTTGATCTTCTCCCTCTTGTTCCTGTTCCTCTTCCTCCTACTAATAATCTGCCTCAA
TCACTCCATTGGTCCTCTGATAATGGGAGTTCTGAAAATGTTTCGTCGGGAAACGGTGGT
TTGCCGGCGGCGAGAGGTTTCGACGTGAACCGGCTACCGGCGGCGGGTATGGATGAAGTT
TCATCTCCAAACAGTGTAGCGTCGTCGTTTCGGATGGATTTTGGGCTTTTCAAAAGCTGT
GTTAATATTATAGGCGTCGGAAATAAACGGAACTCGGAATCCGCCGGCGGCGAACCGGAA
AGAGCATCGTCAAGAGCCAGTGATGACGATGAAAATGGTGCTAATACTCGCAAAAAACTT
AGACTATCAAAAGAACAATCAGCTTATCTTGAAGAAAGCTTCAAAGAACACCATACTCTA
AATCCTAAGCAAAAGCTGGCACTTGCAAAACAGCTAAGTCTAAGGCCAAGACAAGTTGAA
GTCTGGTTTCAGAATAGAAGAGCAAGGACAAAATTGAAACAAACAGAAGTGGATTGTGAG
TACTTAAAAAGATGTTGTGAAACATTAACTGATGAAAACAGAAGGCTACACAAAGAACTT
CAAGAATTGAGAGCTTTAAAGACTTCTAATCCATTTTACATGCAACTTCCGGCCACCACA
CTAACTATGTGTCCTTCATGTGAAAGGGTGGCTTCCACCACTACCACCACCTCCGCCGCC
ACGGCTCCTCCTATCACCGCCGCCACCGCCACCGCCACCACCACTACTACAAGTGACTCA
ATTCCTAAAGCAATTCCATTTCTTAATTCTAGACCAAGATTTTTCCCATTTACTACTACT
AATAATAATCCAAATCATTCCCACCAATCAGCAGCTTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400011195
PEP Infomation

pacid=37440525 transcript=PGSC0003DMT400016146 locus=PGSC0003DMG400006311 ID=PGSC0003DMT400016146.v4.03 annot-version=v4.03
Sequence

MELGLSLGDAKTNNTTNSSPKSFFLCKKNVISTCNDHEKKKSLGFCMALGINSSSERVEQ
DEDDEENNTSEEGTNNTLPVQLDLLPLVPVPLPPTNNLPQSLHWSSDNGSSENVSSGNGG
LPAARGFDVNRLPAAGMDEVSSPNSVASSFRMDFGLFKSCVNIIGVGNKRNSESAGGEPE
RASSRASDDDENGANTRKKLRLSKEQSAYLEESFKEHHTLNPKQKLALAKQLSLRPRQVE
VWFQNRRARTKLKQTEVDCEYLKRCCETLTDENRRLHKELQELRALKTSNPFYMQLPATT
LTMCPSCERVASTTTTTSAATAPPITAATATATTTTTSDSIPKAIPFLNSRPRFFPFTTT
NNNPNHSHQSAAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400016146
Transcript Infomation

pacid=37440525 locus=PGSC0003DMG400006311 ID=PGSC0003DMT400016146.v4.03 annot-version=v4.03
Sequence

ATGGAGCTTGGATTAAGCTTAGGAGATGCTAAGACAAACAATACAACAAACTCTTCTCCA
AAATCATTTTTCTTGTGTAAGAAAAATGTTATTTCTACTTGTAATGATCATGAGAAGAAA
AAAAGTTTAGGGTTTTGCATGGCTTTAGGAATTAACTCATCAAGTGAAAGAGTAGAACAA
GATGAAGATGATGAAGAAAATAATACTTCTGAAGAAGGCACTAATAATACTCTACCAGTT
CAGCTTGATCTTCTCCCTCTTGTTCCTGTTCCTCTTCCTCCTACTAATAATCTGCCTCAA
TCACTCCATTGGTCCTCTGATAATGGGAGTTCTGAAAATGTTTCGTCGGGAAACGGTGGT
TTGCCGGCGGCGAGAGGTTTCGACGTGAACCGGCTACCGGCGGCGGGTATGGATGAAGTT
TCATCTCCAAACAGTGTAGCGTCGTCGTTTCGGATGGATTTTGGGCTTTTCAAAAGCTGT
GTTAATATTATAGGCGTCGGAAATAAACGGAACTCGGAATCCGCCGGCGGCGAACCGGAA
AGAGCATCGTCAAGAGCCAGTGATGACGATGAAAATGGTGCTAATACTCGCAAAAAACTT
AGACTATCAAAAGAACAATCAGCTTATCTTGAAGAAAGCTTCAAAGAACACCATACTCTA
AATCCTAAGCAAAAGCTGGCACTTGCAAAACAGCTAAGTCTAAGGCCAAGACAAGTTGAA
GTCTGGTTTCAGAATAGAAGAGCAAGGACAAAATTGAAACAAACAGAAGTGGATTGTGAG
TACTTAAAAAGATGTTGTGAAACATTAACTGATGAAAACAGAAGGCTACACAAAGAACTT
CAAGAATTGAGAGCTTTAAAGACTTCTAATCCATTTTACATGCAACTTCCGGCCACCACA
CTAACTATGTGTCCTTCATGTGAAAGGGTGGCTTCCACCACTACCACCACCTCCGCCGCC
ACGGCTCCTCCTATCACCGCCGCCACCGCCACCGCCACCACCACTACTACAAGTGACTCA
ATTCCTAAAGCAATTCCATTTCTTAATTCTAGACCAAGATTTTTCCCATTTACTACTACT
AATAATAATCCAAATCATTCCCACCAATCAGCAGCTTCATGA