Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016119
CDS Infomation

pacid=37436171 polypeptide=PGSC0003DMP400011174 locus=PGSC0003DMG400006301 ID=PGSC0003DMT400016119.v4.03 annot-version=v4.03
Sequence

ATGGACTCAAAGATTTATGGTGTTCCACTTTCTACAACACAAGGGAGCCCACCTGCAAAT
GTCCCTCTTTTCACTTCAACAGGTATTAGAGCTCCTATTACTATTGATGATTCTGACTTT
GAATACTCTATCTCTGCTAATGGACAAAAATATAGTAGTAGTAGTTATTATGGTAGTGGC
TCTGAAGGTTTTGTTAGTGGTGAGGAGGATGAGTTTGAAACTGCTTCTGAAAGGTTATTT
CTATCTGACCCAGATGAGCAAAATCTTGAAAAAACTCATTTTGTTAATCAATTTGTTGTT
TCTAGACCTTTTGTGAAAACCCCAGATGAAGAAATTGTTGAAAGAGGTAGTAGTGTGGGG
GATTATGATGATTCTAGGTCTTCTTTAACTGACCCGTATGCAGAAGATGAATATAGGGAT
AGGCCTTTTGTTGTAGATAGGGGAATTGATGAAGGACATGGTGAATTTAGTGATAGTCCT
TTTGTTGTGGATGAGCTAGCTACAGGGGAATCGATGGATGGGTCTGATAAAGAGGGAACT
AGAGTTGTTGATAGTGCAATTCGAGGCATTCCAATTGCACAGTTGTCCTGGGATAGTGAG
GATGATGAGTACTTGAGTACTGGTGTTCTAGAAGACAATGATGTTTCAGGTGTCTTTAGA
ATTCCGAATGCAGTGGTGTTGGATAGGTTAGATAGTGCTCCAAAAGTTAGAATCTCAGAT
GTTTCGGATTATGAATCAGAGTCTGAGAATGCGATACAATCTGGGATGGAAGAGGACTTG
ATCATTACAAAAAATGTTGAGATGGTTTTAGGTTCCGACAGTACAGAAGAGGATAAAGTT
GAAGTTGACACTGTTCAGAATTTCATAACGGATGGAGGTGCAGCCAATGATACTTTAGAA
GGAGGAAAAAATTTGTATCAGGTTGCAAGTAAAAAATCTACTTTATTGGGACAAGAGTTG
GACAATGATGAAGAGCTTTTAGCAGAAGAAAGTCAAATTCTTGATAGTAGTGTAGAGGCA
AAAAGTGCAGATTCGTCTCGTGATGTTAAGCCTTCTGACACTGCTTACTCCAGCCCAATG
GAAGAAAATAGAGAATCAAAATTTGGAGCTGATGAATTGGACTCTGGAAACAGCATCATC
TTACTTACTGGAGCTTCTGGGGACAGTCAGAAATCAGAAAGTAAGGAGGATGGGGTTTAT
CAAGGAAGTGATTGTCAGGATATTGCCACTAGAACTGAAACCGAATCTTTTCATGAACCC
ATCAAGGATAGTGAACCTGAGAGCTTGGAGTGCACTGATATTTCAGTACCACCAACAGCT
GAAGAACAAGTATATTCTAGTGCAAGTTCTTCATCAGATGTAACTTGGTCCTCCAGAGCT
GAAGATGATCTACCTAAGTTATCGGATAAAACACAACACAGGGAGGCTTGTTTAAATCCA
GACTTAGAAGCCAACTGCAAAGTCATTGATACAGTCAAATTGTTCAAAAATGAAGAAGTC
CCATTCTTACATGAAAATGATGAAAGTTTGACCTTTGTTGGATCCGGTGGTATGAAACTT
ATCATTGATCAGTTGGACCAACAAATAGCCACTACCGACTACGATGGAGAGGTTTCTGAG
GGTCATTTACCAAAGGTTGATGGTGAGATTGTGACAGACTCAGATGAAGAGGTTGATACA
GACGAAGAAAGTGAAGAGAATGAGATGTTTGATGCTGAAGCACTGGCTGCGCTGTTGAGG
GCAGCTACAGTTGTTGGGCATGAAGGTGGAAATGTTTCAATTCCATCAGCTGATGGTACA
CGGGTTTTTTCTCTGGAGCTTCCTGGTAGCCCGGGATCCACATTTCACTCGTCCAAACCT
GGTCAGCCAACCAATGCAGATAAGTTTCCCCTATCTGACAATAATACTGAAGGTATATCA
GAAGGGATTTTGAGTGAAGAAGAAAAGAAGAAGCTTGAGAAATTACAGCAGTTAAGAATA
AAATTTTTGCGGCTCATCCACAAGCTAAACCGGTCTCCTGAAGATTCCATAGCTGCACAG
GTCTTATACCGGTTAGTTCGCGCTGCAGGGAAGTCAGCCTCTCAAGTATCGAGCCTTGAC
TCTGCCCAGAAGGTAGCTATAGAGTTGGAAGCAGAGGATACAGACAGTTTGAAGTTTTCT
CTGAATATCCTTGTTATTGGTAAAACAGGAGTTGGTAAGAGTGCAACAATAAACTCTATC
TTTCGTGAAGCCAAATCAATGGTAGATGCATTTGTGCCTGCGACTACCAATGTGAAGGAG
ATAATTGGACAACTGGATGGAGTTACATTGAACATCTTGGATACTCCTGGTTTCAGATCT
TCCCTGACGGAGCAATCCATTAACCGAAGAACTTTGTTGTCCATAAAGAAATATATGAAG
AAATACAGTCCTGATGTAGTCCTCTATGTTGACCGCATTGACACACAGTCTAGAGATCTT
GGTGATCTACCATTATTGAAGTCCATCAGTAGTTATCTTGGTCCATCAATATGGCGTAAT
GCCATAGTTACCCTGACACATGCTGCTTCAAGTCCTCCAGATGGACCCTCGGGGTATCCA
GTAAGCTATGAAATGTTTGTTGCTCAGTGCTCCCGTATCATTCAACAGTTAATTGACCAC
TCCATAGGTGATCCACACACGATGAATGCTGGGTTGATGAGTCGTCCATTTGCTCTTGTT
GAAAACCACCCAGTCAGTCCAAAGAATGACAAAGGAGAAATATTGCTTCCAAATGGAGAA
AATTGGAGATCACAGCTTCTGCTTCTGTGTTACTCAATAAAGATTTTATCAGAAGTAGAT
TCCATCATGAAAGATCAAGATCTTAATGACCACAGAAAGCTTTTTGGCTTCCCCAAGCGG
TCACTCCCATTACCATACTTTTTATCTTCACTGTTACAATCAAATGTTCATCCTAAAGTC
TCTAACAATCAAGTTGGTGAGGATATGGACTCAGACATTGAGCTGGCATATTCATCTGAT
TCTGACCAAGAAGTTGATGATTACGATGACCTTCCACCTTTCAGACCTTTGAGGAAATCT
CAAATTGCTAAGTTAAGCAAGGAGCAGAAGAGAGCATATTTTGACGAGTATGATTACCGT
GTGAAGCTGCTTCAGAAGAAACAATGGAGGGAGGAGTTAAAAAGGCTTCGGGACATGAAG
AAGAAAGGCAAGGCAGAGATAGGTGATTACATGGAAGAAGGTGCTGACCAGGAAACAGGG
AGCCAAGCAGGAGTAGCAATCCCTTTACCTGACATGGTGCTCCCAAATTCTTTTGACGGG
GACAACCCAGCTTACAGATACCGGTATTTAGAACCTTCGTCTCAACTTCTTGCCAGGCCT
GTTATGGACTCTCAGAGCTGGGACCACGATTGTGGATATGATGGTGTGAGCATTGAGGAT
CACCTCGCCATTGCTGGTCAGTTTCCTGCAGTAATAGTTCTTCAGCTCACAAAAGACAAG
AAAGAGTTCAACATCCACTTGGATTCATCTGTTTCAGCAAAGACGGGGAAGAAAGGATCA
AGTATGGTAGGGTTCGACATTCAAACTGTAGGAAAGCAACTTGCCTATATTTTGAAGGGA
GAAACAAAAGTGAAAAATCTGAAAACGAATAAAACAGCTGCAGGGGTATCCATTACTTTC
TTGGGCGACAATTTAGTGACAGGATTGAAATTGGAGGACCAATTTTCCATTGGTAAACAG
TTAGTTGTGGTGGGAAGTACTGGCACCATCATGTCTCAGGGTAATGCAGCATATGGAGCC
AACTTAGAGTTGCGTCTGAGAGAGAAAGATTACCCTGTTGGACAGGACCAAAGTTCACTC
GGCCTTTCTTTGATGAAATGGAGAAATGATCTCATATGGGGATGCAATCTGCAATCTCAG
TTCTCTGTTGGAAGGAATTCCAAGATTGCTGTTAAGGCCGGATTAAACAGCAAGAAAAGC
GGGCAAATCACAGTTAAGACAAGCACTTCAGATCAACTACAGATTGCTATTTTAGGACTT
CTGCCAATTGCTAGAGCAATAATGATGACCCTTTTTCCTCAGACAAGTGGAAAGAACTTA
ATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400011174
PEP Infomation

pacid=37436171 transcript=PGSC0003DMT400016119 locus=PGSC0003DMG400006301 ID=PGSC0003DMT400016119.v4.03 annot-version=v4.03
Sequence

MDSKIYGVPLSTTQGSPPANVPLFTSTGIRAPITIDDSDFEYSISANGQKYSSSSYYGSG
SEGFVSGEEDEFETASERLFLSDPDEQNLEKTHFVNQFVVSRPFVKTPDEEIVERGSSVG
DYDDSRSSLTDPYAEDEYRDRPFVVDRGIDEGHGEFSDSPFVVDELATGESMDGSDKEGT
RVVDSAIRGIPIAQLSWDSEDDEYLSTGVLEDNDVSGVFRIPNAVVLDRLDSAPKVRISD
VSDYESESENAIQSGMEEDLIITKNVEMVLGSDSTEEDKVEVDTVQNFITDGGAANDTLE
GGKNLYQVASKKSTLLGQELDNDEELLAEESQILDSSVEAKSADSSRDVKPSDTAYSSPM
EENRESKFGADELDSGNSIILLTGASGDSQKSESKEDGVYQGSDCQDIATRTETESFHEP
IKDSEPESLECTDISVPPTAEEQVYSSASSSSDVTWSSRAEDDLPKLSDKTQHREACLNP
DLEANCKVIDTVKLFKNEEVPFLHENDESLTFVGSGGMKLIIDQLDQQIATTDYDGEVSE
GHLPKVDGEIVTDSDEEVDTDEESEENEMFDAEALAALLRAATVVGHEGGNVSIPSADGT
RVFSLELPGSPGSTFHSSKPGQPTNADKFPLSDNNTEGISEGILSEEEKKKLEKLQQLRI
KFLRLIHKLNRSPEDSIAAQVLYRLVRAAGKSASQVSSLDSAQKVAIELEAEDTDSLKFS
LNILVIGKTGVGKSATINSIFREAKSMVDAFVPATTNVKEIIGQLDGVTLNILDTPGFRS
SLTEQSINRRTLLSIKKYMKKYSPDVVLYVDRIDTQSRDLGDLPLLKSISSYLGPSIWRN
AIVTLTHAASSPPDGPSGYPVSYEMFVAQCSRIIQQLIDHSIGDPHTMNAGLMSRPFALV
ENHPVSPKNDKGEILLPNGENWRSQLLLLCYSIKILSEVDSIMKDQDLNDHRKLFGFPKR
SLPLPYFLSSLLQSNVHPKVSNNQVGEDMDSDIELAYSSDSDQEVDDYDDLPPFRPLRKS
QIAKLSKEQKRAYFDEYDYRVKLLQKKQWREELKRLRDMKKKGKAEIGDYMEEGADQETG
SQAGVAIPLPDMVLPNSFDGDNPAYRYRYLEPSSQLLARPVMDSQSWDHDCGYDGVSIED
HLAIAGQFPAVIVLQLTKDKKEFNIHLDSSVSAKTGKKGSSMVGFDIQTVGKQLAYILKG
ETKVKNLKTNKTAAGVSITFLGDNLVTGLKLEDQFSIGKQLVVVGSTGTIMSQGNAAYGA
NLELRLREKDYPVGQDQSSLGLSLMKWRNDLIWGCNLQSQFSVGRNSKIAVKAGLNSKKS
GQITVKTSTSDQLQIAILGLLPIARAIMMTLFPQTSGKNLM*

Transcript Sequence

Transcript ID

PGSC0003DMT400016119
Transcript Infomation

pacid=37436171 locus=PGSC0003DMG400006301 ID=PGSC0003DMT400016119.v4.03 annot-version=v4.03
Sequence

ATGGACTCAAAGATTTATGGTGTTCCACTTTCTACAACACAAGGGAGCCCACCTGCAAAT
GTCCCTCTTTTCACTTCAACAGGTATTAGAGCTCCTATTACTATTGATGATTCTGACTTT
GAATACTCTATCTCTGCTAATGGACAAAAATATAGTAGTAGTAGTTATTATGGTAGTGGC
TCTGAAGGTTTTGTTAGTGGTGAGGAGGATGAGTTTGAAACTGCTTCTGAAAGGTTATTT
CTATCTGACCCAGATGAGCAAAATCTTGAAAAAACTCATTTTGTTAATCAATTTGTTGTT
TCTAGACCTTTTGTGAAAACCCCAGATGAAGAAATTGTTGAAAGAGGTAGTAGTGTGGGG
GATTATGATGATTCTAGGTCTTCTTTAACTGACCCGTATGCAGAAGATGAATATAGGGAT
AGGCCTTTTGTTGTAGATAGGGGAATTGATGAAGGACATGGTGAATTTAGTGATAGTCCT
TTTGTTGTGGATGAGCTAGCTACAGGGGAATCGATGGATGGGTCTGATAAAGAGGGAACT
AGAGTTGTTGATAGTGCAATTCGAGGCATTCCAATTGCACAGTTGTCCTGGGATAGTGAG
GATGATGAGTACTTGAGTACTGGTGTTCTAGAAGACAATGATGTTTCAGGTGTCTTTAGA
ATTCCGAATGCAGTGGTGTTGGATAGGTTAGATAGTGCTCCAAAAGTTAGAATCTCAGAT
GTTTCGGATTATGAATCAGAGTCTGAGAATGCGATACAATCTGGGATGGAAGAGGACTTG
ATCATTACAAAAAATGTTGAGATGGTTTTAGGTTCCGACAGTACAGAAGAGGATAAAGTT
GAAGTTGACACTGTTCAGAATTTCATAACGGATGGAGGTGCAGCCAATGATACTTTAGAA
GGAGGAAAAAATTTGTATCAGGTTGCAAGTAAAAAATCTACTTTATTGGGACAAGAGTTG
GACAATGATGAAGAGCTTTTAGCAGAAGAAAGTCAAATTCTTGATAGTAGTGTAGAGGCA
AAAAGTGCAGATTCGTCTCGTGATGTTAAGCCTTCTGACACTGCTTACTCCAGCCCAATG
GAAGAAAATAGAGAATCAAAATTTGGAGCTGATGAATTGGACTCTGGAAACAGCATCATC
TTACTTACTGGAGCTTCTGGGGACAGTCAGAAATCAGAAAGTAAGGAGGATGGGGTTTAT
CAAGGAAGTGATTGTCAGGATATTGCCACTAGAACTGAAACCGAATCTTTTCATGAACCC
ATCAAGGATAGTGAACCTGAGAGCTTGGAGTGCACTGATATTTCAGTACCACCAACAGCT
GAAGAACAAGTATATTCTAGTGCAAGTTCTTCATCAGATGTAACTTGGTCCTCCAGAGCT
GAAGATGATCTACCTAAGTTATCGGATAAAACACAACACAGGGAGGCTTGTTTAAATCCA
GACTTAGAAGCCAACTGCAAAGTCATTGATACAGTCAAATTGTTCAAAAATGAAGAAGTC
CCATTCTTACATGAAAATGATGAAAGTTTGACCTTTGTTGGATCCGGTGGTATGAAACTT
ATCATTGATCAGTTGGACCAACAAATAGCCACTACCGACTACGATGGAGAGGTTTCTGAG
GGTCATTTACCAAAGGTTGATGGTGAGATTGTGACAGACTCAGATGAAGAGGTTGATACA
GACGAAGAAAGTGAAGAGAATGAGATGTTTGATGCTGAAGCACTGGCTGCGCTGTTGAGG
GCAGCTACAGTTGTTGGGCATGAAGGTGGAAATGTTTCAATTCCATCAGCTGATGGTACA
CGGGTTTTTTCTCTGGAGCTTCCTGGTAGCCCGGGATCCACATTTCACTCGTCCAAACCT
GGTCAGCCAACCAATGCAGATAAGTTTCCCCTATCTGACAATAATACTGAAGGTATATCA
GAAGGGATTTTGAGTGAAGAAGAAAAGAAGAAGCTTGAGAAATTACAGCAGTTAAGAATA
AAATTTTTGCGGCTCATCCACAAGCTAAACCGGTCTCCTGAAGATTCCATAGCTGCACAG
GTCTTATACCGGTTAGTTCGCGCTGCAGGGAAGTCAGCCTCTCAAGTATCGAGCCTTGAC
TCTGCCCAGAAGGTAGCTATAGAGTTGGAAGCAGAGGATACAGACAGTTTGAAGTTTTCT
CTGAATATCCTTGTTATTGGTAAAACAGGAGTTGGTAAGAGTGCAACAATAAACTCTATC
TTTCGTGAAGCCAAATCAATGGTAGATGCATTTGTGCCTGCGACTACCAATGTGAAGGAG
ATAATTGGACAACTGGATGGAGTTACATTGAACATCTTGGATACTCCTGGTTTCAGATCT
TCCCTGACGGAGCAATCCATTAACCGAAGAACTTTGTTGTCCATAAAGAAATATATGAAG
AAATACAGTCCTGATGTAGTCCTCTATGTTGACCGCATTGACACACAGTCTAGAGATCTT
GGTGATCTACCATTATTGAAGTCCATCAGTAGTTATCTTGGTCCATCAATATGGCGTAAT
GCCATAGTTACCCTGACACATGCTGCTTCAAGTCCTCCAGATGGACCCTCGGGGTATCCA
GTAAGCTATGAAATGTTTGTTGCTCAGTGCTCCCGTATCATTCAACAGTTAATTGACCAC
TCCATAGGTGATCCACACACGATGAATGCTGGGTTGATGAGTCGTCCATTTGCTCTTGTT
GAAAACCACCCAGTCAGTCCAAAGAATGACAAAGGAGAAATATTGCTTCCAAATGGAGAA
AATTGGAGATCACAGCTTCTGCTTCTGTGTTACTCAATAAAGATTTTATCAGAAGTAGAT
TCCATCATGAAAGATCAAGATCTTAATGACCACAGAAAGCTTTTTGGCTTCCCCAAGCGG
TCACTCCCATTACCATACTTTTTATCTTCACTGTTACAATCAAATGTTCATCCTAAAGTC
TCTAACAATCAAGTTGGTGAGGATATGGACTCAGACATTGAGCTGGCATATTCATCTGAT
TCTGACCAAGAAGTTGATGATTACGATGACCTTCCACCTTTCAGACCTTTGAGGAAATCT
CAAATTGCTAAGTTAAGCAAGGAGCAGAAGAGAGCATATTTTGACGAGTATGATTACCGT
GTGAAGCTGCTTCAGAAGAAACAATGGAGGGAGGAGTTAAAAAGGCTTCGGGACATGAAG
AAGAAAGGCAAGGCAGAGATAGGTGATTACATGGAAGAAGGTGCTGACCAGGAAACAGGG
AGCCAAGCAGGAGTAGCAATCCCTTTACCTGACATGGTGCTCCCAAATTCTTTTGACGGG
GACAACCCAGCTTACAGATACCGGTATTTAGAACCTTCGTCTCAACTTCTTGCCAGGCCT
GTTATGGACTCTCAGAGCTGGGACCACGATTGTGGATATGATGGTGTGAGCATTGAGGAT
CACCTCGCCATTGCTGGTCAGTTTCCTGCAGTAATAGTTCTTCAGCTCACAAAAGACAAG
AAAGAGTTCAACATCCACTTGGATTCATCTGTTTCAGCAAAGACGGGGAAGAAAGGATCA
AGTATGGTAGGGTTCGACATTCAAACTGTAGGAAAGCAACTTGCCTATATTTTGAAGGGA
GAAACAAAAGTGAAAAATCTGAAAACGAATAAAACAGCTGCAGGGGTATCCATTACTTTC
TTGGGCGACAATTTAGTGACAGGATTGAAATTGGAGGACCAATTTTCCATTGGTAAACAG
TTAGTTGTGGTGGGAAGTACTGGCACCATCATGTCTCAGGGTAATGCAGCATATGGAGCC
AACTTAGAGTTGCGTCTGAGAGAGAAAGATTACCCTGTTGGACAGGACCAAAGTTCACTC
GGCCTTTCTTTGATGAAATGGAGAAATGATCTCATATGGGGATGCAATCTGCAATCTCAG
TTCTCTGTTGGAAGGAATTCCAAGATTGCTGTTAAGGCCGGATTAAACAGCAAGAAAAGC
GGGCAAATCACAGTTAAGACAAGCACTTCAGATCAACTACAGATTGCTATTTTAGGACTT
CTGCCAATTGCTAGAGCAATAATGATGACCCTTTTTCCTCAGACAAGTGGAAAGAACTTA
ATGTAG