Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016115
CDS Infomation

pacid=37436245 polypeptide=PGSC0003DMP400011170 locus=PGSC0003DMG400006298 ID=PGSC0003DMT400016115.v4.03 annot-version=v4.03
Sequence

ATGGGAAGGTACAGAAGTCGTAGTCGGAGCCTTAGCAGAAGTTGCAGTCCCGTGAGACAT
AAACGCCACGACGAACCACGTGACCGGCGCCGAGAACGTCGCTCTCCGGGACCTTCTGGC
CTTCTCGTTCGTAATATCCCCCTTAGTGCCAGGCCAGAAGATCTTAGGGTCCCCTTTGAA
CGTTATGGTCCCATAAGAGATGTTTATCTTCCCAAGAATTACCATACTGGGGAACCACGA
GGATTTGGCTTTGTGAAGTTCCGTTATGCCGAAGATGCAGCTGAAGCAAAAGCACACTTA
AACAATACAGTTATTGGTGGACGTGATATTAGGATTGTTTTTGCTGAGGATAATCGAAAG
ACCCCTAAAGAAATGCGCAAGGTTTTACGCACAAGTGGACCTAGTGCTCGAGGCAGCTAC
AGGAGACAGAGTCCACCAAGTCGCAGATATCACTCTTACTCGCGCTCGGCTTCCCCCGCA
AGACGTGACTCAAGGGACAGGGATCATGAGAAGAATCATGATGATGATTACTACTCGCCA
AGGAGATCCAGGTCAAAGTCTCGGTCTATTTCTCCAAGGGATGACAGAAATTGTAGGTCG
AAAGGAAGATCTTCAAGGCAATCAAGACCAATGTCAAGGTCAAATTCTCCATGCATTCAG
AAAAAAGGCAGGTTCAGCATGAGTCCAAGAGATAATAGTCAAATTGCTCATGATGTGGAC
TCCACCCCAAGGAGGCTCAAGAGTCCTGGAAGAAATGGAGGCAGCTCAGCCAGATCTCCC
TCTAGGTCCTACAGTCGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400011170
PEP Infomation

pacid=37436245 transcript=PGSC0003DMT400016115 locus=PGSC0003DMG400006298 ID=PGSC0003DMT400016115.v4.03 annot-version=v4.03
Sequence

MGRYRSRSRSLSRSCSPVRHKRHDEPRDRRRERRSPGPSGLLVRNIPLSARPEDLRVPFE
RYGPIRDVYLPKNYHTGEPRGFGFVKFRYAEDAAEAKAHLNNTVIGGRDIRIVFAEDNRK
TPKEMRKVLRTSGPSARGSYRRQSPPSRRYHSYSRSASPARRDSRDRDHEKNHDDDYYSP
RRSRSKSRSISPRDDRNCRSKGRSSRQSRPMSRSNSPCIQKKGRFSMSPRDNSQIAHDVD
STPRRLKSPGRNGGSSARSPSRSYSR*

Transcript Sequence

Transcript ID

PGSC0003DMT400016115
Transcript Infomation

pacid=37436245 locus=PGSC0003DMG400006298 ID=PGSC0003DMT400016115.v4.03 annot-version=v4.03
Sequence

ATGGGAAGGTACAGAAGTCGTAGTCGGAGCCTTAGCAGAAGTTGCAGTCCCGTGAGACAT
AAACGCCACGACGAACCACGTGACCGGCGCCGAGAACGTCGCTCTCCGGGACCTTCTGGC
CTTCTCGTTCGTAATATCCCCCTTAGTGCCAGGCCAGAAGATCTTAGGGTCCCCTTTGAA
CGTTATGGTCCCATAAGAGATGTTTATCTTCCCAAGAATTACCATACTGGGGAACCACGA
GGATTTGGCTTTGTGAAGTTCCGTTATGCCGAAGATGCAGCTGAAGCAAAAGCACACTTA
AACAATACAGTTATTGGTGGACGTGATATTAGGATTGTTTTTGCTGAGGATAATCGAAAG
ACCCCTAAAGAAATGCGCAAGGTTTTACGCACAAGTGGACCTAGTGCTCGAGGCAGCTAC
AGGAGACAGAGTCCACCAAGTCGCAGATATCACTCTTACTCGCGCTCGGCTTCCCCCGCA
AGACGTGACTCAAGGGACAGGGATCATGAGAAGAATCATGATGATGATTACTACTCGCCA
AGGAGATCCAGGTCAAAGTCTCGGTCTATTTCTCCAAGGGATGACAGAAATTGTAGGTCG
AAAGGAAGATCTTCAAGGCAATCAAGACCAATGTCAAGGTCAAATTCTCCATGCATTCAG
AAAAAAGGCAGGTTCAGCATGAGTCCAAGAGATAATAGTCAAATTGCTCATGATGTGGAC
TCCACCCCAAGGAGGCTCAAGAGTCCTGGAAGAAATGGAGGCAGCTCAGCCAGATCTCCC
TCTAGGTCCTACAGTCGTTGA