Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016073
CDS Infomation

pacid=37441561 polypeptide=PGSC0003DMP400011138 locus=PGSC0003DMG401006284 ID=PGSC0003DMT400016073.v4.03 annot-version=v4.03
Sequence

ATGCATAATCAACCTTCTTCACCGTCACAAACCGGAGCTCCGACCGAGTTAAGGAATACC
CAGATGATTTCCTCTTTGCTTTCCGGTACCCCTGATGACCCCGCAGCTTCATCCATCTTT
GACTGGTCAGATTTACTCGAATTCGACCTACACGAACAATTGAGCATCTCATTCGATGAC
CCACTTCACCAAGAGCAGCAGCCGGAGACAGAATTGGTGGCGCCGGTGATACCTTCTTCG
GAGGATTCACCACAAAGCCAAGATACGGATGCGGGTCGGATCAGGAAGAGGGACCCGAGG
ATGGCATGTTCGAATTTTCTGGCGGGTCAGATCCCGTGTGCTTGCCCCGAGCTAGATGAG
AAGATGGAGGAAGAGGAGATGGCAGGGATTGGGCCAGGGAAGAAACGGGCTAGGACTGTA
CGGGCTTCTGCCGGAGCTGGAGCGAGGTGTCAAGTACCGGATTGTGAGGCGGATATCAGT
GAGCTGAAAGGGTATCATAAGAGACACAGGGTGTGCTTACGTTGTGCTAATGCAACTGCT
GTGGTTCTCGATGGGCATAGTAAGAGATATTGTCAGCAGTGTGGCAAGTTTCATATTTTG
TCAGACTTTGATGAAGGTAAGCGTAGTTGTAGAAGAAAATTAGAGCGACACAACAACAGG
CGTAGGAGAAAAGCCACTGATTCGTCCAAAACGTCTGCTGAAAAGGAATCTCAGCAGGTC
ACAACGGCTGATGATGTTAGTGGTGATGACGACATCGTCAAAGATAGCACATGCATGGGC
AGCCAGTTAGGAGAAAAGGAAATCCTATTAGAATCTGAAGGACATGTGCCAATATGCTCT
ACTCAAGGCATCCAAAATAATCACAGTGATAGTTTCACAGCTTCTGGTGAAACACAGGTT
GATGCAGAAAAGGAGAACTACAAAAATTCCCATTCTCCAACCTATTATGACAACAAGAGT
GCCCTTTCTTCAGTGTGCCCCACTGGTCGGATCTCATTCAAGCTTTATGATTGGAACCCT
GCAGAGTTCCCTCGAAGACTCCGTCACCAAATCTTCCAGTGGTTGGCCAGTATGCCTGTC
GAATTGGAGGGCTATATTCGTCCAGGTTGTACAATCTTGACAGTTTTTGTTGCAATGCCG
ACATTCAAGTGGGGTAAGTTACTAGAAGACCCAGCTGCACACCTATATGAGTTAATTGCA
TCACCTGGAAACACGCTTCGTGGAAGAGGAAGCTTTCTTATTTATCTCAACAACATGGTA
TTTCGTGTTACCAAAGGTGAAAATTCAGTAGTTAAAGTCAAGCTGAAGGGACCAGCACCA
AAGCTTATGTCTATTCATCCTACGTGCTTTGAGGCTGGCAAGCCTATGGAGTTTTTTGCC
TGTGGAAGCAATCTGATGCAGCCCAGATTCCGGTTTCTTGTGTCATTTGGGGGAAGGTAT
TTGGGGAATGATAACAATGTCGTACCATCAGATTGTAAAATTGAAGGTGATTCTAGAAGC
ATGGAGCATCAATTATTAAAGATACATGTCCCTAGAACTGAAGCAGATCTTTTTGGCCCC
GCTTTTGTTGAGGTTGAGAATGAATCTGGCTTATCTAACTTCATCCCCATCCTCGTTGCG
GAAAAGGATATTTGTGCAGAAATGAAGGAAATACAACGGAAGTTCTGTTCTGGAGGGTCA
GAATGCACTGCTGTTTGTTCTCCATGTGAAGCTTCCACGTCTAGAAAATCAGAATTTTCA
GAATTTATGTTGGATGTGGCATGGTTACTAAGGGAGCCTTCCTCAGAAAATGTTCAGATT
CTGGCGTCTGTACAGATGCAGAGATTTAATTATTTGTTGAACATTTTAATGGAAAGTCAG
TCAACTATTATTTTGGAAAGAGTATTGTCTTATTTTGAAAATATGGTGAAGAGAAATATG
TTAGCTGGCATCACTGATGCTGACATGAGACTTTTTCAGAAGAATATCCTCGAGAAAAAT
AATCTGCTCAAGGAAAGATTGTATCTAAAGGAATATTTTGCGGGAGATTCGGGACAAATT
ATCCAGGAGGACACAGAGGTACCACATAAGCACAACATAGAGTTTGGTCCTACTTATTGG
GAGAGAACTTCTACAGTCCCACTTTTGGATGCAGAATTGCCATTGAGAGTGAAGGAAGAA
CAATCAGGGAAGTCCTGTGGCTTCTTGGTTAGGAAGACGTCTCGTACTCTTGTTTTTGTG
ATCTCTGGTTTTGCTTTGTGTCTTGGTCTATGTGCAACATTCCTGCACCCTAGAAAAGTT
AGTGACATTGCTATGACAATCCGGAGGTGTTTGTTTGACAAAACTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400011138
PEP Infomation

pacid=37441561 transcript=PGSC0003DMT400016073 locus=PGSC0003DMG401006284 ID=PGSC0003DMT400016073.v4.03 annot-version=v4.03
Sequence

MHNQPSSPSQTGAPTELRNTQMISSLLSGTPDDPAASSIFDWSDLLEFDLHEQLSISFDD
PLHQEQQPETELVAPVIPSSEDSPQSQDTDAGRIRKRDPRMACSNFLAGQIPCACPELDE
KMEEEEMAGIGPGKKRARTVRASAGAGARCQVPDCEADISELKGYHKRHRVCLRCANATA
VVLDGHSKRYCQQCGKFHILSDFDEGKRSCRRKLERHNNRRRRKATDSSKTSAEKESQQV
TTADDVSGDDDIVKDSTCMGSQLGEKEILLESEGHVPICSTQGIQNNHSDSFTASGETQV
DAEKENYKNSHSPTYYDNKSALSSVCPTGRISFKLYDWNPAEFPRRLRHQIFQWLASMPV
ELEGYIRPGCTILTVFVAMPTFKWGKLLEDPAAHLYELIASPGNTLRGRGSFLIYLNNMV
FRVTKGENSVVKVKLKGPAPKLMSIHPTCFEAGKPMEFFACGSNLMQPRFRFLVSFGGRY
LGNDNNVVPSDCKIEGDSRSMEHQLLKIHVPRTEADLFGPAFVEVENESGLSNFIPILVA
EKDICAEMKEIQRKFCSGGSECTAVCSPCEASTSRKSEFSEFMLDVAWLLREPSSENVQI
LASVQMQRFNYLLNILMESQSTIILERVLSYFENMVKRNMLAGITDADMRLFQKNILEKN
NLLKERLYLKEYFAGDSGQIIQEDTEVPHKHNIEFGPTYWERTSTVPLLDAELPLRVKEE
QSGKSCGFLVRKTSRTLVFVISGFALCLGLCATFLHPRKVSDIAMTIRRCLFDKT*

Transcript Sequence

Transcript ID

PGSC0003DMT400016073
Transcript Infomation

pacid=37441561 locus=PGSC0003DMG401006284 ID=PGSC0003DMT400016073.v4.03 annot-version=v4.03
Sequence

ATGCATAATCAACCTTCTTCACCGTCACAAACCGGAGCTCCGACCGAGTTAAGGAATACC
CAGATGATTTCCTCTTTGCTTTCCGGTACCCCTGATGACCCCGCAGCTTCATCCATCTTT
GACTGGTCAGATTTACTCGAATTCGACCTACACGAACAATTGAGCATCTCATTCGATGAC
CCACTTCACCAAGAGCAGCAGCCGGAGACAGAATTGGTGGCGCCGGTGATACCTTCTTCG
GAGGATTCACCACAAAGCCAAGATACGGATGCGGGTCGGATCAGGAAGAGGGACCCGAGG
ATGGCATGTTCGAATTTTCTGGCGGGTCAGATCCCGTGTGCTTGCCCCGAGCTAGATGAG
AAGATGGAGGAAGAGGAGATGGCAGGGATTGGGCCAGGGAAGAAACGGGCTAGGACTGTA
CGGGCTTCTGCCGGAGCTGGAGCGAGGTGTCAAGTACCGGATTGTGAGGCGGATATCAGT
GAGCTGAAAGGGTATCATAAGAGACACAGGGTGTGCTTACGTTGTGCTAATGCAACTGCT
GTGGTTCTCGATGGGCATAGTAAGAGATATTGTCAGCAGTGTGGCAAGTTTCATATTTTG
TCAGACTTTGATGAAGGTAAGCGTAGTTGTAGAAGAAAATTAGAGCGACACAACAACAGG
CGTAGGAGAAAAGCCACTGATTCGTCCAAAACGTCTGCTGAAAAGGAATCTCAGCAGGTC
ACAACGGCTGATGATGTTAGTGGTGATGACGACATCGTCAAAGATAGCACATGCATGGGC
AGCCAGTTAGGAGAAAAGGAAATCCTATTAGAATCTGAAGGACATGTGCCAATATGCTCT
ACTCAAGGCATCCAAAATAATCACAGTGATAGTTTCACAGCTTCTGGTGAAACACAGGTT
GATGCAGAAAAGGAGAACTACAAAAATTCCCATTCTCCAACCTATTATGACAACAAGAGT
GCCCTTTCTTCAGTGTGCCCCACTGGTCGGATCTCATTCAAGCTTTATGATTGGAACCCT
GCAGAGTTCCCTCGAAGACTCCGTCACCAAATCTTCCAGTGGTTGGCCAGTATGCCTGTC
GAATTGGAGGGCTATATTCGTCCAGGTTGTACAATCTTGACAGTTTTTGTTGCAATGCCG
ACATTCAAGTGGGGTAAGTTACTAGAAGACCCAGCTGCACACCTATATGAGTTAATTGCA
TCACCTGGAAACACGCTTCGTGGAAGAGGAAGCTTTCTTATTTATCTCAACAACATGGTA
TTTCGTGTTACCAAAGGTGAAAATTCAGTAGTTAAAGTCAAGCTGAAGGGACCAGCACCA
AAGCTTATGTCTATTCATCCTACGTGCTTTGAGGCTGGCAAGCCTATGGAGTTTTTTGCC
TGTGGAAGCAATCTGATGCAGCCCAGATTCCGGTTTCTTGTGTCATTTGGGGGAAGGTAT
TTGGGGAATGATAACAATGTCGTACCATCAGATTGTAAAATTGAAGGTGATTCTAGAAGC
ATGGAGCATCAATTATTAAAGATACATGTCCCTAGAACTGAAGCAGATCTTTTTGGCCCC
GCTTTTGTTGAGGTTGAGAATGAATCTGGCTTATCTAACTTCATCCCCATCCTCGTTGCG
GAAAAGGATATTTGTGCAGAAATGAAGGAAATACAACGGAAGTTCTGTTCTGGAGGGTCA
GAATGCACTGCTGTTTGTTCTCCATGTGAAGCTTCCACGTCTAGAAAATCAGAATTTTCA
GAATTTATGTTGGATGTGGCATGGTTACTAAGGGAGCCTTCCTCAGAAAATGTTCAGATT
CTGGCGTCTGTACAGATGCAGAGATTTAATTATTTGTTGAACATTTTAATGGAAAGTCAG
TCAACTATTATTTTGGAAAGAGTATTGTCTTATTTTGAAAATATGGTGAAGAGAAATATG
TTAGCTGGCATCACTGATGCTGACATGAGACTTTTTCAGAAGAATATCCTCGAGAAAAAT
AATCTGCTCAAGGAAAGATTGTATCTAAAGGAATATTTTGCGGGAGATTCGGGACAAATT
ATCCAGGAGGACACAGAGGTACCACATAAGCACAACATAGAGTTTGGTCCTACTTATTGG
GAGAGAACTTCTACAGTCCCACTTTTGGATGCAGAATTGCCATTGAGAGTGAAGGAAGAA
CAATCAGGGAAGTCCTGTGGCTTCTTGGTTAGGAAGACGTCTCGTACTCTTGTTTTTGTG
ATCTCTGGTTTTGCTTTGTGTCTTGGTCTATGTGCAACATTCCTGCACCCTAGAAAAGTT
AGTGACATTGCTATGACAATCCGGAGGTGTTTGTTTGACAAAACTTAA