Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016064
CDS Infomation

pacid=37440378 polypeptide=PGSC0003DMP400011130 locus=PGSC0003DMG400006281 ID=PGSC0003DMT400016064.v4.03 annot-version=v4.03
Sequence

ATGGCGGGAACTTGCATCACTCCTCCATGTCTCCTTCGGCTTTCTACACCTTCCACTCTC
CTTTCGAGGAAACCTCTTCTTTTAGCTTCTGCCTTAACGACACCGCGCCGAAGAAAATTT
GCAAAGAGGAAAAACTATCTCCGCCCCAAAATACTCAAAACCACTACTAAACCCTACATA
AAACCCCAAAATGAACCAATAACTCCCCTTGAAACCCCAATCCAACACACCCATATTTCG
CCTTCCGACGAAGTCGCTAAAGCGCCGGAAAATCAAGGACTCCGGCTGTCGGAAGTTTCA
GAACCCGAAGCTATTGTTAATGACACTGAAAGTACCTTTTATGAAACCCCAATTCAACAA
ACCCACATTTTGGACTCCGATTTAGCCGCCGGTGACGAGCTGAAAACGTTTGAAAATCAA
GAATTCCGGCTGTCGGAAGTTTCAGATCCGTCTGGAGCTGTTAATGCCGTTGCAGGTACC
TTTGGTAAAGGCTCGTTGCTGAAATTTGGATTATGGATAGTTGGAGCCTTTGTATTTCAA
ACAGTTTGTGCTGTTTGGGTATTTGGTTCAGCTGATTTTAGTGGAAAAAATAAAAGTTCG
GATGGTAATGGTTATAAAAATGAGGTCTTGGAGTTGGATTTGAAAGGTACAAGTAAGCAC
AAATTGAGAATGTTTGTGAATGGGGATGGAAATCAGAGTATTGAAAATGGGGGAACTGTT
TTTGTGGACGAGGCTGAAATGGAGAAGAAGATTGAGGAAATTCAACATATGGCAAGGGAG
GCGAGAGAGAAGGAAAGGTTGGAGTTGAAGGGCAATGACGTTGATGAGGAGCAGGAGGAA
GAAATTGAGGATAGTGATGTTAAAATGGGGATAAAAAAGGAAGTTGATGAACGGTTAATC
AAGCTGAGAAAGAGACTGGGAAAGGTTAGCAACAAACAGCCTACAAATTCTGTTACTTTT
CCAACGGTTGATGTTAATAAAAATGTCTGGGATGATGGTGGTACTTTGGATGAGAAAGAG
CTTAGTGCTTCTTTAACATTTAAAAGAAAGCAGAAATTTAGAGAGTTCGTCAGTAAACCA
AGTAATAAACCAAAGGGTTTTATGGCCCTTGACCATCAAAGTGTTGGTACAAATGGAGAT
AAAACTTTGGAAGACAACACCGAAGTGAAGAAGAATGGAAATAGAGAAGGTGGAGTCGAT
GTGTTGGGCGATGATGAGGTAGACCTGCTCACCCTTGATTCACACAGAGGTGCTTTTGTG
AAATTTGGTGAAAACATAGAGAGTAAAGGAAACACTGAAGATGCAGAGTTGGTATCACCT
TTAAGTGTGAAGAAATCTTCCGAAAACAAGGGGAGGGGAAGAAAGGAAAGGAGTGTTAAA
AAAGTCGAAGGTGGAAAGGCTGATGTTATCAAAGCTGTCAAGAAGAACTCATTGGAGAAG
AGCGGAAGGAAGAAAAATGGAATTGCATCAGACTTGGAGGAATCTAAACCAAGAATTGAC
TCAAAAGAATTAAGCAATCAGGAGACTGCAACAATTTCAAATACTGGAAATACTTTGGTT
GAAGTTATGGACTCGGGAGAATCACGCCGTATAAAGAGTACTACAATGATGAACAGACGC
AAGAACTCAAATAGAAACGGAACTTCAAATATGAAGGAAGTTAAGGACCAAAAAGTAGTG
AATCCAAAGGAGGGTACGAATTCAGGAAATGATACTGATTTTTGGTGGTTCAGTCTTCCT
TATGTTCTTGCTATACGCATGCGGAGAGGTCATGATGATGAAGGACCAGAAGGATTGTTT
ACCTTAAAAAGTAGCTCTCAAGTGAATGGTAGCTTATCTCATACAGTCACCTTTGAAGAT
CGTGGTGATGCCACCAATTTTTGTTATCTCTTACAGTCCTTCTTTGAAGACTTGGGAGAT
TTCAGTGCTGAAATTGTCCCTTTACCAGTTAAAGAACTCAGTGAGGCAATTAGATCACAT
ACTATGAAGGTAATTGTGGTGAAGAAAGGGAAACTGAAGCTTTATGCTGGACAACCATTA
GCTGATGCTGAGATGGCTTTGCGCTCATTGGTTGAACAGGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400011130
PEP Infomation

pacid=37440378 transcript=PGSC0003DMT400016064 locus=PGSC0003DMG400006281 ID=PGSC0003DMT400016064.v4.03 annot-version=v4.03
Sequence

MAGTCITPPCLLRLSTPSTLLSRKPLLLASALTTPRRRKFAKRKNYLRPKILKTTTKPYI
KPQNEPITPLETPIQHTHISPSDEVAKAPENQGLRLSEVSEPEAIVNDTESTFYETPIQQ
THILDSDLAAGDELKTFENQEFRLSEVSDPSGAVNAVAGTFGKGSLLKFGLWIVGAFVFQ
TVCAVWVFGSADFSGKNKSSDGNGYKNEVLELDLKGTSKHKLRMFVNGDGNQSIENGGTV
FVDEAEMEKKIEEIQHMAREAREKERLELKGNDVDEEQEEEIEDSDVKMGIKKEVDERLI
KLRKRLGKVSNKQPTNSVTFPTVDVNKNVWDDGGTLDEKELSASLTFKRKQKFREFVSKP
SNKPKGFMALDHQSVGTNGDKTLEDNTEVKKNGNREGGVDVLGDDEVDLLTLDSHRGAFV
KFGENIESKGNTEDAELVSPLSVKKSSENKGRGRKERSVKKVEGGKADVIKAVKKNSLEK
SGRKKNGIASDLEESKPRIDSKELSNQETATISNTGNTLVEVMDSGESRRIKSTTMMNRR
KNSNRNGTSNMKEVKDQKVVNPKEGTNSGNDTDFWWFSLPYVLAIRMRRGHDDEGPEGLF
TLKSSSQVNGSLSHTVTFEDRGDATNFCYLLQSFFEDLGDFSAEIVPLPVKELSEAIRSH
TMKVIVVKKGKLKLYAGQPLADAEMALRSLVEQE*

Transcript Sequence

Transcript ID

PGSC0003DMT400016064
Transcript Infomation

pacid=37440378 locus=PGSC0003DMG400006281 ID=PGSC0003DMT400016064.v4.03 annot-version=v4.03
Sequence

ATGGCGGGAACTTGCATCACTCCTCCATGTCTCCTTCGGCTTTCTACACCTTCCACTCTC
CTTTCGAGGAAACCTCTTCTTTTAGCTTCTGCCTTAACGACACCGCGCCGAAGAAAATTT
GCAAAGAGGAAAAACTATCTCCGCCCCAAAATACTCAAAACCACTACTAAACCCTACATA
AAACCCCAAAATGAACCAATAACTCCCCTTGAAACCCCAATCCAACACACCCATATTTCG
CCTTCCGACGAAGTCGCTAAAGCGCCGGAAAATCAAGGACTCCGGCTGTCGGAAGTTTCA
GAACCCGAAGCTATTGTTAATGACACTGAAAGTACCTTTTATGAAACCCCAATTCAACAA
ACCCACATTTTGGACTCCGATTTAGCCGCCGGTGACGAGCTGAAAACGTTTGAAAATCAA
GAATTCCGGCTGTCGGAAGTTTCAGATCCGTCTGGAGCTGTTAATGCCGTTGCAGGTACC
TTTGGTAAAGGCTCGTTGCTGAAATTTGGATTATGGATAGTTGGAGCCTTTGTATTTCAA
ACAGTTTGTGCTGTTTGGGTATTTGGTTCAGCTGATTTTAGTGGAAAAAATAAAAGTTCG
GATGGTAATGGTTATAAAAATGAGGTCTTGGAGTTGGATTTGAAAGGTACAAGTAAGCAC
AAATTGAGAATGTTTGTGAATGGGGATGGAAATCAGAGTATTGAAAATGGGGGAACTGTT
TTTGTGGACGAGGCTGAAATGGAGAAGAAGATTGAGGAAATTCAACATATGGCAAGGGAG
GCGAGAGAGAAGGAAAGGTTGGAGTTGAAGGGCAATGACGTTGATGAGGAGCAGGAGGAA
GAAATTGAGGATAGTGATGTTAAAATGGGGATAAAAAAGGAAGTTGATGAACGGTTAATC
AAGCTGAGAAAGAGACTGGGAAAGGTTAGCAACAAACAGCCTACAAATTCTGTTACTTTT
CCAACGGTTGATGTTAATAAAAATGTCTGGGATGATGGTGGTACTTTGGATGAGAAAGAG
CTTAGTGCTTCTTTAACATTTAAAAGAAAGCAGAAATTTAGAGAGTTCGTCAGTAAACCA
AGTAATAAACCAAAGGGTTTTATGGCCCTTGACCATCAAAGTGTTGGTACAAATGGAGAT
AAAACTTTGGAAGACAACACCGAAGTGAAGAAGAATGGAAATAGAGAAGGTGGAGTCGAT
GTGTTGGGCGATGATGAGGTAGACCTGCTCACCCTTGATTCACACAGAGGTGCTTTTGTG
AAATTTGGTGAAAACATAGAGAGTAAAGGAAACACTGAAGATGCAGAGTTGGTATCACCT
TTAAGTGTGAAGAAATCTTCCGAAAACAAGGGGAGGGGAAGAAAGGAAAGGAGTGTTAAA
AAAGTCGAAGGTGGAAAGGCTGATGTTATCAAAGCTGTCAAGAAGAACTCATTGGAGAAG
AGCGGAAGGAAGAAAAATGGAATTGCATCAGACTTGGAGGAATCTAAACCAAGAATTGAC
TCAAAAGAATTAAGCAATCAGGAGACTGCAACAATTTCAAATACTGGAAATACTTTGGTT
GAAGTTATGGACTCGGGAGAATCACGCCGTATAAAGAGTACTACAATGATGAACAGACGC
AAGAACTCAAATAGAAACGGAACTTCAAATATGAAGGAAGTTAAGGACCAAAAAGTAGTG
AATCCAAAGGAGGGTACGAATTCAGGAAATGATACTGATTTTTGGTGGTTCAGTCTTCCT
TATGTTCTTGCTATACGCATGCGGAGAGGTCATGATGATGAAGGACCAGAAGGATTGTTT
ACCTTAAAAAGTAGCTCTCAAGTGAATGGTAGCTTATCTCATACAGTCACCTTTGAAGAT
CGTGGTGATGCCACCAATTTTTGTTATCTCTTACAGTCCTTCTTTGAAGACTTGGGAGAT
TTCAGTGCTGAAATTGTCCCTTTACCAGTTAAAGAACTCAGTGAGGCAATTAGATCACAT
ACTATGAAGGTAATTGTGGTGAAGAAAGGGAAACTGAAGCTTTATGCTGGACAACCATTA
GCTGATGCTGAGATGGCTTTGCGCTCATTGGTTGAACAGGAATGA