Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016059
CDS Infomation

pacid=37440388 polypeptide=PGSC0003DMP400011125 locus=PGSC0003DMG400006279 ID=PGSC0003DMT400016059.v4.03 annot-version=v4.03
Sequence

ATGGAAATTCAGAGTCCGATGAAGCTAAAGAGATTGGTTGTGATCGGAAGGCATAAAAAA
GACCGAATCAGTGATTTACCCGATGCCATCCTTCTTCACATCCTCTCTATGGTGCCGGAC
GGAAAACAAGTTGTGCGAACCAGCGTACTGGGTAAACGATGGAGGTCTCTTTGGATGTCT
GTTCCAATGTCAATCGATTTCAACTTCCCCCAAACTGAAAATCTAGTCGTCACACTTGAT
TACCTGTCGTCCACACTTACAGAACTTCATTACTGTAAGTCGTGCGATAAAATACCCAGA
TTTACCGTTGGGGGATTTAGGTACGAACACTGTTATGCTAAGTATGTTGATTTATGGGTT
AGTTTCGCTACTAAAGTTGCTAAGGTGGAAGAATTTTTGCTTGGATTGTTATCTGTAAAT
GATCAAACTTATGACTTCCCTTCGTATGCATTTAAGAATTCGTTGCTTAAGGATTTGGAA
TTGAGGAATTGCCAACTTAACCCTCGTGCTACTGTTGATTGGACTAATCTAAGCTCTCTT
AAAATTGGGTATATCGATTTGACAGATGATGCTATGGAAAAGATATTATCTGGTTCCCCG
AACTTGAAAAGCTTGGAACTAGATAATTTTTCCGGCCTACAACGTCTCGAAATTAACTCT
GTCAAGTTGACACAACTGATGATAGAATCTTATTACAATGACAATGATGAGATTTGGCTT
GAAATAGTAGCTCCCCATCTTCAGCATTTAGAAGTTTTGGAATTGTGCAGTGAGATACGC
ATTGGCCAGAGAAATGTGCCTTCACTTGTCACTGCAATCTTTCGTTTAAATTTTAATTTT
GAGAATGAAGAACAAGACTTGGAGATGGAATTTAGCTGTTTGAAGGAACTTCTTCATAGT
GTTGCCCATGTCCAGAATCTTGAATTGGGTACCTGGTGCATCGAGTGCGTGTCCATCCTA
GAGTTGAAAGGGTGGCGGCCTCCACCATCAAGCCGGAAATTCTTAGAACTGAACCTAGCC
GTAATACAATTGGACTTCCCTGGAATTTACAGCTTTCTACAGAGCTCATCGGATCTTGAG
ACATTGATCATTGGTTGTTGGTACAATCACAATGAAAGAAATCTGTTGGCAAGGTACACA
GATGAGGATGAACTGAGCGAGAGGTTTGAGAAGCATAATGTTAAATGCTCATTTTCACAT
CTGAAGACCATCACGATCAATAACTTTTCTGGATCATCAAGTGAAAATAAGTTTGTGCTG
CAATTGGTAAAATATTTGCTCAAGCATGCAGCCATGCTAAAAGAGTTTGTCATTGCTTCC
ACATACCAATGGATGTCTCCGGAGTATCGTAAAATGGCACAAAAGCTCTTAAGCTTTCCA
ATGTCCTCTCCGCACGCTTCAGTTGTCTTTTCTGACATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400011125
PEP Infomation

pacid=37440388 transcript=PGSC0003DMT400016059 locus=PGSC0003DMG400006279 ID=PGSC0003DMT400016059.v4.03 annot-version=v4.03
Sequence

MEIQSPMKLKRLVVIGRHKKDRISDLPDAILLHILSMVPDGKQVVRTSVLGKRWRSLWMS
VPMSIDFNFPQTENLVVTLDYLSSTLTELHYCKSCDKIPRFTVGGFRYEHCYAKYVDLWV
SFATKVAKVEEFLLGLLSVNDQTYDFPSYAFKNSLLKDLELRNCQLNPRATVDWTNLSSL
KIGYIDLTDDAMEKILSGSPNLKSLELDNFSGLQRLEINSVKLTQLMIESYYNDNDEIWL
EIVAPHLQHLEVLELCSEIRIGQRNVPSLVTAIFRLNFNFENEEQDLEMEFSCLKELLHS
VAHVQNLELGTWCIECVSILELKGWRPPPSSRKFLELNLAVIQLDFPGIYSFLQSSSDLE
TLIIGCWYNHNERNLLARYTDEDELSERFEKHNVKCSFSHLKTITINNFSGSSSENKFVL
QLVKYLLKHAAMLKEFVIASTYQWMSPEYRKMAQKLLSFPMSSPHASVVFSDI*

Transcript Sequence

Transcript ID

PGSC0003DMT400016059
Transcript Infomation

pacid=37440388 locus=PGSC0003DMG400006279 ID=PGSC0003DMT400016059.v4.03 annot-version=v4.03
Sequence

ATGGAAATTCAGAGTCCGATGAAGCTAAAGAGATTGGTTGTGATCGGAAGGCATAAAAAA
GACCGAATCAGTGATTTACCCGATGCCATCCTTCTTCACATCCTCTCTATGGTGCCGGAC
GGAAAACAAGTTGTGCGAACCAGCGTACTGGGTAAACGATGGAGGTCTCTTTGGATGTCT
GTTCCAATGTCAATCGATTTCAACTTCCCCCAAACTGAAAATCTAGTCGTCACACTTGAT
TACCTGTCGTCCACACTTACAGAACTTCATTACTGTAAGTCGTGCGATAAAATACCCAGA
TTTACCGTTGGGGGATTTAGGTACGAACACTGTTATGCTAAGTATGTTGATTTATGGGTT
AGTTTCGCTACTAAAGTTGCTAAGGTGGAAGAATTTTTGCTTGGATTGTTATCTGTAAAT
GATCAAACTTATGACTTCCCTTCGTATGCATTTAAGAATTCGTTGCTTAAGGATTTGGAA
TTGAGGAATTGCCAACTTAACCCTCGTGCTACTGTTGATTGGACTAATCTAAGCTCTCTT
AAAATTGGGTATATCGATTTGACAGATGATGCTATGGAAAAGATATTATCTGGTTCCCCG
AACTTGAAAAGCTTGGAACTAGATAATTTTTCCGGCCTACAACGTCTCGAAATTAACTCT
GTCAAGTTGACACAACTGATGATAGAATCTTATTACAATGACAATGATGAGATTTGGCTT
GAAATAGTAGCTCCCCATCTTCAGCATTTAGAAGTTTTGGAATTGTGCAGTGAGATACGC
ATTGGCCAGAGAAATGTGCCTTCACTTGTCACTGCAATCTTTCGTTTAAATTTTAATTTT
GAGAATGAAGAACAAGACTTGGAGATGGAATTTAGCTGTTTGAAGGAACTTCTTCATAGT
GTTGCCCATGTCCAGAATCTTGAATTGGGTACCTGGTGCATCGAGTGCGTGTCCATCCTA
GAGTTGAAAGGGTGGCGGCCTCCACCATCAAGCCGGAAATTCTTAGAACTGAACCTAGCC
GTAATACAATTGGACTTCCCTGGAATTTACAGCTTTCTACAGAGCTCATCGGATCTTGAG
ACATTGATCATTGGTTGTTGGTACAATCACAATGAAAGAAATCTGTTGGCAAGGTACACA
GATGAGGATGAACTGAGCGAGAGGTTTGAGAAGCATAATGTTAAATGCTCATTTTCACAT
CTGAAGACCATCACGATCAATAACTTTTCTGGATCATCAAGTGAAAATAAGTTTGTGCTG
CAATTGGTAAAATATTTGCTCAAGCATGCAGCCATGCTAAAAGAGTTTGTCATTGCTTCC
ACATACCAATGGATGTCTCCGGAGTATCGTAAAATGGCACAAAAGCTCTTAAGCTTTCCA
ATGTCCTCTCCGCACGCTTCAGTTGTCTTTTCTGACATATAA