Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016040
CDS Infomation

pacid=37455788 polypeptide=PGSC0003DMP400011113 locus=PGSC0003DMG400006271 ID=PGSC0003DMT400016040.v4.03 annot-version=v4.03
Sequence

ATGAAGACCCGACAAATTTCGATAGCCATTGTTCTATGTGCATCACTCTTTGTTCTCAAC
GTACAATCTAAAACCGTTGATCCTTATAAGGTGCTTGGAGTTGATAAAAGCGCAAGTCAG
CGTGAGATCCAGAAAGCTTTTCACAAGCTCTCACTCCAATACCATCCAGACAAGAACAAA
AGTAAGGGTGCACAGGAGAAATTTGCTGAGATTAATAACGCTTATGAAATTCTGTCCGAT
GAAGATAAGAGGAAAAACTATGACCTATATGGAGATGAGAAGGGAGCTCCTGGATTTGAT
GCTGGAGGCGCTGGAGATCATGGTGGATATACATACTTTACAAGTGGTGGACCAGGACAA
AGTGGGTTTAACTTCGGGCCAGGTGGTATGGGTGGTGGACAAGGAGGTGCAAAATCATTT
TCATTTTCCTTTGGCGGTCCTGGCAGCCAAAGCTCTTCTGGCTTTGGTTTAGATGATATA
TTCTCCAACATGTTTGGGGGTGGTATGGGAAGTGGGAGTCAGTTTGGGGGTGGTATGGGA
GGTGGGAGTAAATTTGGGGGTTTTAGTGGCTTTGGTGGTTCAGGCAGGTCTCAGTCTAGA
ACCAAGAACTCTGGCAAGAGCATCCCTTCTGTAAACTCGCAGATGTATAAGAAAGAAATA
TCTGATAAAGGAATGACTTGGCTATTACTCTCTCATACATCTACATCAAGAGATATCCAA
TATTATGAATCTGTCATCAGAGAAGTTGCAAGCTCACTGGATGGGGCAATGAAGGTGGGG
AGAATAAACTGTGAAACTGATGCATCTTTTTGCAAGGGTCTTGGCATATATCCTCGCAAT
GTGCCAAGATTGTTTGTGTATTCATTAAAATCAAGTGGGGATGGTGCGTTGATGGAGTAC
AGTGATGATTTAGATGTGAAGAGGGTGAAAAGTTTTTGCCATGATCATCTTCCTAGATTC
TCAAAGCGTGTAGATTTGGACCACTTTGATTTTGTTTCCCAGACTGTAGGAGGTTTACCC
AAAGTGATGCTTCTCTCAACAAAGAAAGATACTCCAGTTATTTGGCGTGCTCTTAGTGGC
TTGTATCGAAATCGTTTTGTCTTCTATGATGCACAGGTTCGTGATTCTTCTGATCCTGCT
GTCCGAAGGTTGGGTGTTGATGCTCTTCCTGCCATTGTTAGCTGGCTATCTAATGGGGAG
AAACAGATTTTGAGAACAGGAATCTCTGTAAAAGATCTAAAGTCGGCAATTCAAGATCTA
AGTAGTTTACTGGACAATTTTGAAAAGAAAAATAAGAAGGCAGCTTCAGCTCAGAGTAAA
AGTGAGCAGAGCGAAGCAGAGGCTAAGCAAGTACCAGTACTGACAGGCTCTAATTTCAAT
GACATTTGTGGGGAGAAAACTCCTGTTTGTGTGATTGGTGTTTTCAGGTCATCTAAAGCA
AGGGATAAGCTAGAAAAAGTTCTATTATCGGTCTCTCAAAAGTCATTATCAAGACGACAG
AGTACAGCCTATGGCTCAAGAGATTCAGTTTCCTATGCACTTTTGGATGCAGCGAGGCAG
CAGTCTTTCTTGAATGCATTTGACAAATCAGGATATAAATCATCAGACAAGGTCCTTCTT
GCATACAAGCCGCGGAAGGGTAAGTTTGCAGTTTTTGAGGGAGACGTCACTTCTGAAGAT
GCAGAGAGTTTCATTAGCTCCGTTCTCAGTGGGGACGTACAATTTTCCAACACCAGACAG
AAACCTGTAGCAAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400011113
PEP Infomation

pacid=37455788 transcript=PGSC0003DMT400016040 locus=PGSC0003DMG400006271 ID=PGSC0003DMT400016040.v4.03 annot-version=v4.03
Sequence

MKTRQISIAIVLCASLFVLNVQSKTVDPYKVLGVDKSASQREIQKAFHKLSLQYHPDKNK
SKGAQEKFAEINNAYEILSDEDKRKNYDLYGDEKGAPGFDAGGAGDHGGYTYFTSGGPGQ
SGFNFGPGGMGGGQGGAKSFSFSFGGPGSQSSSGFGLDDIFSNMFGGGMGSGSQFGGGMG
GGSKFGGFSGFGGSGRSQSRTKNSGKSIPSVNSQMYKKEISDKGMTWLLLSHTSTSRDIQ
YYESVIREVASSLDGAMKVGRINCETDASFCKGLGIYPRNVPRLFVYSLKSSGDGALMEY
SDDLDVKRVKSFCHDHLPRFSKRVDLDHFDFVSQTVGGLPKVMLLSTKKDTPVIWRALSG
LYRNRFVFYDAQVRDSSDPAVRRLGVDALPAIVSWLSNGEKQILRTGISVKDLKSAIQDL
SSLLDNFEKKNKKAASAQSKSEQSEAEAKQVPVLTGSNFNDICGEKTPVCVIGVFRSSKA
RDKLEKVLLSVSQKSLSRRQSTAYGSRDSVSYALLDAARQQSFLNAFDKSGYKSSDKVLL
AYKPRKGKFAVFEGDVTSEDAESFISSVLSGDVQFSNTRQKPVAK*

Transcript Sequence

Transcript ID

PGSC0003DMT400016040
Transcript Infomation

pacid=37455788 locus=PGSC0003DMG400006271 ID=PGSC0003DMT400016040.v4.03 annot-version=v4.03
Sequence

ATGAAGACCCGACAAATTTCGATAGCCATTGTTCTATGTGCATCACTCTTTGTTCTCAAC
GTACAATCTAAAACCGTTGATCCTTATAAGGTGCTTGGAGTTGATAAAAGCGCAAGTCAG
CGTGAGATCCAGAAAGCTTTTCACAAGCTCTCACTCCAATACCATCCAGACAAGAACAAA
AGTAAGGGTGCACAGGAGAAATTTGCTGAGATTAATAACGCTTATGAAATTCTGTCCGAT
GAAGATAAGAGGAAAAACTATGACCTATATGGAGATGAGAAGGGAGCTCCTGGATTTGAT
GCTGGAGGCGCTGGAGATCATGGTGGATATACATACTTTACAAGTGGTGGACCAGGACAA
AGTGGGTTTAACTTCGGGCCAGGTGGTATGGGTGGTGGACAAGGAGGTGCAAAATCATTT
TCATTTTCCTTTGGCGGTCCTGGCAGCCAAAGCTCTTCTGGCTTTGGTTTAGATGATATA
TTCTCCAACATGTTTGGGGGTGGTATGGGAAGTGGGAGTCAGTTTGGGGGTGGTATGGGA
GGTGGGAGTAAATTTGGGGGTTTTAGTGGCTTTGGTGGTTCAGGCAGGTCTCAGTCTAGA
ACCAAGAACTCTGGCAAGAGCATCCCTTCTGTAAACTCGCAGATGTATAAGAAAGAAATA
TCTGATAAAGGAATGACTTGGCTATTACTCTCTCATACATCTACATCAAGAGATATCCAA
TATTATGAATCTGTCATCAGAGAAGTTGCAAGCTCACTGGATGGGGCAATGAAGGTGGGG
AGAATAAACTGTGAAACTGATGCATCTTTTTGCAAGGGTCTTGGCATATATCCTCGCAAT
GTGCCAAGATTGTTTGTGTATTCATTAAAATCAAGTGGGGATGGTGCGTTGATGGAGTAC
AGTGATGATTTAGATGTGAAGAGGGTGAAAAGTTTTTGCCATGATCATCTTCCTAGATTC
TCAAAGCGTGTAGATTTGGACCACTTTGATTTTGTTTCCCAGACTGTAGGAGGTTTACCC
AAAGTGATGCTTCTCTCAACAAAGAAAGATACTCCAGTTATTTGGCGTGCTCTTAGTGGC
TTGTATCGAAATCGTTTTGTCTTCTATGATGCACAGGTTCGTGATTCTTCTGATCCTGCT
GTCCGAAGGTTGGGTGTTGATGCTCTTCCTGCCATTGTTAGCTGGCTATCTAATGGGGAG
AAACAGATTTTGAGAACAGGAATCTCTGTAAAAGATCTAAAGTCGGCAATTCAAGATCTA
AGTAGTTTACTGGACAATTTTGAAAAGAAAAATAAGAAGGCAGCTTCAGCTCAGAGTAAA
AGTGAGCAGAGCGAAGCAGAGGCTAAGCAAGTACCAGTACTGACAGGCTCTAATTTCAAT
GACATTTGTGGGGAGAAAACTCCTGTTTGTGTGATTGGTGTTTTCAGGTCATCTAAAGCA
AGGGATAAGCTAGAAAAAGTTCTATTATCGGTCTCTCAAAAGTCATTATCAAGACGACAG
AGTACAGCCTATGGCTCAAGAGATTCAGTTTCCTATGCACTTTTGGATGCAGCGAGGCAG
CAGTCTTTCTTGAATGCATTTGACAAATCAGGATATAAATCATCAGACAAGGTCCTTCTT
GCATACAAGCCGCGGAAGGGTAAGTTTGCAGTTTTTGAGGGAGACGTCACTTCTGAAGAT
GCAGAGAGTTTCATTAGCTCCGTTCTCAGTGGGGACGTACAATTTTCCAACACCAGACAG
AAACCTGTAGCAAAGTAA