Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400016034
CDS Infomation

pacid=37456184 polypeptide=PGSC0003DMP400011110 locus=PGSC0003DMG400006268 ID=PGSC0003DMT400016034.v4.03 annot-version=v4.03
Sequence

ATGAGATTTTTACACTTTCTATGGATCTTCTTGATACCCTTTTTGCAAATTTTATTAGGT
AATGAGATTTTCTTAGTTTCCTCTCAATGTCTTGATGATCAAAAGTCATTGTTGCTGCAG
TTGAAGGGAAGCTTCCAATATGATTCTACTTTGTCAAATAATTTGGCAAGATGGAACCAG
AACACAAGTGAATGTTGCAATTGGAATGGGGTTACATGTGACCTCTCTGGTCATGTGATT
GCCTTGGAACTGGATAATCAGACCATTTCTAGTGGAATTGAGAATGCAAGTGCTCTTTTC
AGTCTTCAGTTTCTTGAGAGGCTAAATTTGGCTTACAACAAGTTCAATGTTAGCATACCA
GTTGGTATAGGCAACCTCACCAACTTGAAGTACCTGAATTTATCGAATGCCGGTTTTGTT
GGCCAAATTCCTATGATGTTATCAAGATTAACAAGGCTAATTACTCTTGATCTCTCAACT
CTTTTCCCTGACTTTTACCAGCCACTAAAACTTGAGAATCCCAATTTGAGTCATTTCATT
GAGAACTCAACAGAGCTTAGAGAACTTTACCTTGATGGGGTTGATCTTTCATCTCAGAGG
ACTGAGTGGTGTCAATCTTTATCTTCATATTTGCCTAACTTGACCGTCTTGAGCTTGCGT
GATTGTCGAATTTCAGGCCCTATTCATGAATCACTTTCTAAGCTTCACTTTCTCTCTTTC
ATCCGGCTTGACCAGAACAATCTCTCTACCACAGTTCCTGAATATTTTGCCAATTTCTCG
AGCATGACTACCTTGAACCTCGCCTCTTGTAATTTGCAAGGAACATTTCCTGAAAGAATA
TTTCAGGTGTCAGTTTTAGAGAGTTTGGACTTGTCAACTAACAAGTTGCTTCGTGGTAGT
ATTCCGATTTTTCTTCGAAATGGATCTTTGAGGAGATTATCACTAAGCTACACCAACTTT
TCTGGTTCATTACCAGAGTCCATTTCGAACTTTCAAAACCTGTCCAGGTTAGAGCTTTCC
AATTGCAATTTCAATGGATCAATACCTTCCACAATGGCAAACCTTACCAATCTTGTTTAT
ATAGATTTCTCCTTCAACAATTTCACTGGTTCTATTCCATATTTCCAACAGTCCAAGAAA
CTCACCTACTTAGACCTTTCACGTAATGGTCTAACTGGTCTCTTGTCTAGAGCTCATTTT
GAAGGACTCTCAGAGCTTGTTAACATAAATTTAGGGAACAATTCACTCAATGGGACCCTT
CCTGCATATATATTTGAGCTCCCCTCCTTGCAGCAGCTTTTTCTTAACAACAATCAATTT
GTTGGCCAAGTCCACGAATTCCGCAATGCATCCTCCTCTCCGTTGGATACGGTTGATTTG
AGTAACAACCACCTGAATGGATCGATTCCCAAGTCCACATTTGAAATTGGGAGGCTTAAG
GTCCTCTCACTTTCTTCCAACTCCTTTAGGGGGATTGTGCCCCTCGACCTCATTGGGAGG
CTGAGCAACCTTTCAAGACTGGAGCTTTCTTACAATAACTTGACTGTTGATGCAAGTAGC
AGAAATTCAGCCTCTTTCACATTTCCCCAGTTGAACATATTGAAACTAGCTTCTTGTAGG
CTGCAAAAGTTCCCTAATCTCAAGAACCAGTCAAGGCTGATCCACTTAGACCTTTCAGAC
AACCAAATAAGGGGAGCAATACCAAATTGGATTTGGGGAATTGGTAGTGGAAATCTGGCT
CACCTGAATCTTTCCTTCAATCAGCTGGAGTACATGGAACAGCCTTACAATGCTTCCAGC
AATCTTGTTGTCCTTGACTTGCATTCCAACCGTTTAAAAGGTGACTTACCAATTCCACCT
TCCTCTGCTATCTATGTGGACTATTCGAGCAATAATTTAAACAATTCCATCCCACTAGAT
ATTGGAAATTCTCTTGCTCTTGCCTCCTTTTTCTCGGTAGCAAACAATAACATCACTGGA
ATAATTCCTGAATCCATATGCAATGTCAGCTACCTTCAAGTTCTTGATTTCTCTAACAAT
GCCTTGAGTGGAACAATACCACGATGTCTACTGAATAATAGTACAACTCTTGGAGTGCTG
AATCTAGGGAACAATAGACTCCATGGTGTTATGCCAGATTCATTTCCAATTGGTTGTGCT
CTAAAAACTTTAGACCTCAGCAGGAATATCTTTGAAGGGAAGCTACCAAAATCGCTCGTC
AACTGCACGTTGTTGGAGGTCCTGAATGTTGGAAATAACAGTCTTTTTGATCATTTCCCA
TGCATGTTGAGGAACTCAACCAGCCTGAAGGTCCTAGTCTTGCGCTCCAATAAATTCAAT
GGAAATCTTACGTGTAATATAACCAGAAATAGTTGGAAGAATCTCCAGATCATAGATATA
GCTTCCAACAATTTTACTGGTATGTTGAATGCAGAATGCTTTTCAAATTGGAGAGGAATG
ATGGTTGCAGATGATTACGTGGAGACAGGACGCAATCATATCCAGTATAAGTTCTTCCAA
CTAAGTAACTTGTACTATCAGGACACAGTGACATTAACCATCAAAGGCATGGAGCTGGAG
CTTGTGAAGATTCTCAGGGTCTTCACATCTATTGATTTCTCTTCAAATAGATTTCAAGGA
ATGATACCAGATACGTTTGGGCACCTTAGCTCACTTTATGTTTTGAACCTGTCACACAAC
GCCCTCGAGGGACCAATTCCAAAATCAATTGGGAAGCTACAAATGCTTGAATCGTTAGAC
CTGTCACGAAACCACCTGTCCGGGGAGATCCCCTCAGAGCTTTCAAGTCTCACATTCTTA
GCAGCTTTGAATTTATCATTCAACAATTTGTTTGGCAGTATCCCATTGAGTAATCAATTT
CAAACATTCTCAGCAGATTCCTATGAAGGAAACAGAGGCCTATGCGGGCTCCCTCTTAAC
GTCACTTGCAAAAGCGATGCTCCAGAGTTGAAACCAGCACCAAGTTTTCAAGATGACTCT
TATGATTGGCAGTTCATATTTACGGGTGTGGGATATGGAGTAGGGGCAGCAATCTCCATT
GCACCTCTGTTGTTTTACAAGCAAGGGAGCAAATACTTTGACAAACATTTGGAGAGAATG
CTTAAACTGATGTTTCCAAGATACGGGTTCACTTACACCAGATTTGACCCTGGGAAGGTT
GTAGCTGTGGAAGAATATGAAGATGAGACCCCAGATGATACCGAAGATGACGATGATGGG
GGAAAAGAAGCATCTCTTGGGCATTATTGTGTCTTCTGTAGTAAACTTGATTTTCAGAGA
AATGAAGCAATGCATGATCCTAAATGCACTTGTCATATGTCATCATCCCCCAATTCTTTT
CCTCCTACACCATCCTCTTCTTCACCTTTATTAGTCATATATCACAAAAAGTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400011110
PEP Infomation

pacid=37456184 transcript=PGSC0003DMT400016034 locus=PGSC0003DMG400006268 ID=PGSC0003DMT400016034.v4.03 annot-version=v4.03
Sequence

MRFLHFLWIFLIPFLQILLGNEIFLVSSQCLDDQKSLLLQLKGSFQYDSTLSNNLARWNQ
NTSECCNWNGVTCDLSGHVIALELDNQTISSGIENASALFSLQFLERLNLAYNKFNVSIP
VGIGNLTNLKYLNLSNAGFVGQIPMMLSRLTRLITLDLSTLFPDFYQPLKLENPNLSHFI
ENSTELRELYLDGVDLSSQRTEWCQSLSSYLPNLTVLSLRDCRISGPIHESLSKLHFLSF
IRLDQNNLSTTVPEYFANFSSMTTLNLASCNLQGTFPERIFQVSVLESLDLSTNKLLRGS
IPIFLRNGSLRRLSLSYTNFSGSLPESISNFQNLSRLELSNCNFNGSIPSTMANLTNLVY
IDFSFNNFTGSIPYFQQSKKLTYLDLSRNGLTGLLSRAHFEGLSELVNINLGNNSLNGTL
PAYIFELPSLQQLFLNNNQFVGQVHEFRNASSSPLDTVDLSNNHLNGSIPKSTFEIGRLK
VLSLSSNSFRGIVPLDLIGRLSNLSRLELSYNNLTVDASSRNSASFTFPQLNILKLASCR
LQKFPNLKNQSRLIHLDLSDNQIRGAIPNWIWGIGSGNLAHLNLSFNQLEYMEQPYNASS
NLVVLDLHSNRLKGDLPIPPSSAIYVDYSSNNLNNSIPLDIGNSLALASFFSVANNNITG
IIPESICNVSYLQVLDFSNNALSGTIPRCLLNNSTTLGVLNLGNNRLHGVMPDSFPIGCA
LKTLDLSRNIFEGKLPKSLVNCTLLEVLNVGNNSLFDHFPCMLRNSTSLKVLVLRSNKFN
GNLTCNITRNSWKNLQIIDIASNNFTGMLNAECFSNWRGMMVADDYVETGRNHIQYKFFQ
LSNLYYQDTVTLTIKGMELELVKILRVFTSIDFSSNRFQGMIPDTFGHLSSLYVLNLSHN
ALEGPIPKSIGKLQMLESLDLSRNHLSGEIPSELSSLTFLAALNLSFNNLFGSIPLSNQF
QTFSADSYEGNRGLCGLPLNVTCKSDAPELKPAPSFQDDSYDWQFIFTGVGYGVGAAISI
APLLFYKQGSKYFDKHLERMLKLMFPRYGFTYTRFDPGKVVAVEEYEDETPDDTEDDDDG
GKEASLGHYCVFCSKLDFQRNEAMHDPKCTCHMSSSPNSFPPTPSSSSPLLVIYHKKF*

Transcript Sequence

Transcript ID

PGSC0003DMT400016034
Transcript Infomation

pacid=37456184 locus=PGSC0003DMG400006268 ID=PGSC0003DMT400016034.v4.03 annot-version=v4.03
Sequence

ATGAGATTTTTACACTTTCTATGGATCTTCTTGATACCCTTTTTGCAAATTTTATTAGGT
AATGAGATTTTCTTAGTTTCCTCTCAATGTCTTGATGATCAAAAGTCATTGTTGCTGCAG
TTGAAGGGAAGCTTCCAATATGATTCTACTTTGTCAAATAATTTGGCAAGATGGAACCAG
AACACAAGTGAATGTTGCAATTGGAATGGGGTTACATGTGACCTCTCTGGTCATGTGATT
GCCTTGGAACTGGATAATCAGACCATTTCTAGTGGAATTGAGAATGCAAGTGCTCTTTTC
AGTCTTCAGTTTCTTGAGAGGCTAAATTTGGCTTACAACAAGTTCAATGTTAGCATACCA
GTTGGTATAGGCAACCTCACCAACTTGAAGTACCTGAATTTATCGAATGCCGGTTTTGTT
GGCCAAATTCCTATGATGTTATCAAGATTAACAAGGCTAATTACTCTTGATCTCTCAACT
CTTTTCCCTGACTTTTACCAGCCACTAAAACTTGAGAATCCCAATTTGAGTCATTTCATT
GAGAACTCAACAGAGCTTAGAGAACTTTACCTTGATGGGGTTGATCTTTCATCTCAGAGG
ACTGAGTGGTGTCAATCTTTATCTTCATATTTGCCTAACTTGACCGTCTTGAGCTTGCGT
GATTGTCGAATTTCAGGCCCTATTCATGAATCACTTTCTAAGCTTCACTTTCTCTCTTTC
ATCCGGCTTGACCAGAACAATCTCTCTACCACAGTTCCTGAATATTTTGCCAATTTCTCG
AGCATGACTACCTTGAACCTCGCCTCTTGTAATTTGCAAGGAACATTTCCTGAAAGAATA
TTTCAGGTGTCAGTTTTAGAGAGTTTGGACTTGTCAACTAACAAGTTGCTTCGTGGTAGT
ATTCCGATTTTTCTTCGAAATGGATCTTTGAGGAGATTATCACTAAGCTACACCAACTTT
TCTGGTTCATTACCAGAGTCCATTTCGAACTTTCAAAACCTGTCCAGGTTAGAGCTTTCC
AATTGCAATTTCAATGGATCAATACCTTCCACAATGGCAAACCTTACCAATCTTGTTTAT
ATAGATTTCTCCTTCAACAATTTCACTGGTTCTATTCCATATTTCCAACAGTCCAAGAAA
CTCACCTACTTAGACCTTTCACGTAATGGTCTAACTGGTCTCTTGTCTAGAGCTCATTTT
GAAGGACTCTCAGAGCTTGTTAACATAAATTTAGGGAACAATTCACTCAATGGGACCCTT
CCTGCATATATATTTGAGCTCCCCTCCTTGCAGCAGCTTTTTCTTAACAACAATCAATTT
GTTGGCCAAGTCCACGAATTCCGCAATGCATCCTCCTCTCCGTTGGATACGGTTGATTTG
AGTAACAACCACCTGAATGGATCGATTCCCAAGTCCACATTTGAAATTGGGAGGCTTAAG
GTCCTCTCACTTTCTTCCAACTCCTTTAGGGGGATTGTGCCCCTCGACCTCATTGGGAGG
CTGAGCAACCTTTCAAGACTGGAGCTTTCTTACAATAACTTGACTGTTGATGCAAGTAGC
AGAAATTCAGCCTCTTTCACATTTCCCCAGTTGAACATATTGAAACTAGCTTCTTGTAGG
CTGCAAAAGTTCCCTAATCTCAAGAACCAGTCAAGGCTGATCCACTTAGACCTTTCAGAC
AACCAAATAAGGGGAGCAATACCAAATTGGATTTGGGGAATTGGTAGTGGAAATCTGGCT
CACCTGAATCTTTCCTTCAATCAGCTGGAGTACATGGAACAGCCTTACAATGCTTCCAGC
AATCTTGTTGTCCTTGACTTGCATTCCAACCGTTTAAAAGGTGACTTACCAATTCCACCT
TCCTCTGCTATCTATGTGGACTATTCGAGCAATAATTTAAACAATTCCATCCCACTAGAT
ATTGGAAATTCTCTTGCTCTTGCCTCCTTTTTCTCGGTAGCAAACAATAACATCACTGGA
ATAATTCCTGAATCCATATGCAATGTCAGCTACCTTCAAGTTCTTGATTTCTCTAACAAT
GCCTTGAGTGGAACAATACCACGATGTCTACTGAATAATAGTACAACTCTTGGAGTGCTG
AATCTAGGGAACAATAGACTCCATGGTGTTATGCCAGATTCATTTCCAATTGGTTGTGCT
CTAAAAACTTTAGACCTCAGCAGGAATATCTTTGAAGGGAAGCTACCAAAATCGCTCGTC
AACTGCACGTTGTTGGAGGTCCTGAATGTTGGAAATAACAGTCTTTTTGATCATTTCCCA
TGCATGTTGAGGAACTCAACCAGCCTGAAGGTCCTAGTCTTGCGCTCCAATAAATTCAAT
GGAAATCTTACGTGTAATATAACCAGAAATAGTTGGAAGAATCTCCAGATCATAGATATA
GCTTCCAACAATTTTACTGGTATGTTGAATGCAGAATGCTTTTCAAATTGGAGAGGAATG
ATGGTTGCAGATGATTACGTGGAGACAGGACGCAATCATATCCAGTATAAGTTCTTCCAA
CTAAGTAACTTGTACTATCAGGACACAGTGACATTAACCATCAAAGGCATGGAGCTGGAG
CTTGTGAAGATTCTCAGGGTCTTCACATCTATTGATTTCTCTTCAAATAGATTTCAAGGA
ATGATACCAGATACGTTTGGGCACCTTAGCTCACTTTATGTTTTGAACCTGTCACACAAC
GCCCTCGAGGGACCAATTCCAAAATCAATTGGGAAGCTACAAATGCTTGAATCGTTAGAC
CTGTCACGAAACCACCTGTCCGGGGAGATCCCCTCAGAGCTTTCAAGTCTCACATTCTTA
GCAGCTTTGAATTTATCATTCAACAATTTGTTTGGCAGTATCCCATTGAGTAATCAATTT
CAAACATTCTCAGCAGATTCCTATGAAGGAAACAGAGGCCTATGCGGGCTCCCTCTTAAC
GTCACTTGCAAAAGCGATGCTCCAGAGTTGAAACCAGCACCAAGTTTTCAAGATGACTCT
TATGATTGGCAGTTCATATTTACGGGTGTGGGATATGGAGTAGGGGCAGCAATCTCCATT
GCACCTCTGTTGTTTTACAAGCAAGGGAGCAAATACTTTGACAAACATTTGGAGAGAATG
CTTAAACTGATGTTTCCAAGATACGGGTTCACTTACACCAGATTTGACCCTGGGAAGGTT
GTAGCTGTGGAAGAATATGAAGATGAGACCCCAGATGATACCGAAGATGACGATGATGGG
GGAAAAGAAGCATCTCTTGGGCATTATTGTGTCTTCTGTAGTAAACTTGATTTTCAGAGA
AATGAAGCAATGCATGATCCTAAATGCACTTGTCATATGTCATCATCCCCCAATTCTTTT
CCTCCTACACCATCCTCTTCTTCACCTTTATTAGTCATATATCACAAAAAGTTTTGA