Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015833
CDS Infomation

pacid=37436112 polypeptide=PGSC0003DMP400010976 locus=PGSC0003DMG402006188 ID=PGSC0003DMT400015833.v4.03 annot-version=v4.03
Sequence

ATGATTTTTGCAAAGATATTAGAATCAGAAAAGAGAAATGTAATTGTGGGAATTCGATTT
GATGGACATATTAGAGAGTTATTGAATTGGGCTACTGTAAAAGTTGCAGAACCTGGAGAT
AGAGTTATTGCTCTACATGTTTGTCGAAATGCCGAATCAATTGCAAACGTTAAATCCTCG
TTGGACACTTATCTTTATGATTACGATGGCTTGTGTAATAAAAAGCAGGTTGATCTTATT
TCTGTGGTGACAGAAGGAAGTTCTATTAGAAGAGTTTTGGTGAGGGAAGCAAAGAACTAT
GCTGCATTAGCTGTAATAGTAGGAACTTGCAAGCATAGTACTCTTGGGGGCTGGACCTCA
ATTGCTAAATATTGTGCGAAGAAGCTGCCTACCACTACTGAAGTTATGGCAATTGACAAT
GGGAAAGTTTTGTTTAGAAGAACCTCTACTTCCCAACTCAAAGGTTCTTTTAGTGATCCA
AAACCAAGTCTTTATCTAGAAAGAATTTCTACTTTAAAAGATTGCGAGTCTGAATTTGGT
GAATCTGAGATATCGGAATTTGGAAGGTTCAGTTGTGAAGTGTCTAGAACTTTGGAGAGA
TGGACAAATGGTACACAGAACGTAAAAGAGGAAAATACAACTCCTTCAGGAAAACACAAG
AAAGGTTCTCTTTCACTAGGTTCAGTTTCTCTTCCTACCGAAGATTGTGCTGCTGCTACT
ACTACTCCTGGTTGGCCCCTTTTACAAACGACGAGCTCATTGAATGAACCTGTTAAGGTA
AAAAGAAAGATGTCGGTAGTGCAGTGGGTGATGACCTTGCCAAACAGATCGATGTTAGAT
AGTCCTAAATCAAATTCTTCTCCGAAAGAGAACAAAAATGCTTTTGGAATGGAAAATAGT
TACTCCCTCATGGATTTTATCGAAAAGGAAAGTGCATCAGTTGGTAGCCAGCTGATAAAA
GATTATTTTGGCTGCAAATGGTTTAGCTATGATGTTTTAAGATCATCGACTTCTAACTTC
TCCTCGGAGAAGTTGATCGGTAAAGGAGGGGAAAACAGTGTATACAAAGCGGTCCTTTCT
GATGGAAAATCAGTGGCGGTGAAGGTTTTGAATTCATCAGAGGAAGCAAGGAAGAATTTC
AGGCAGGAAATGGACATTATGACCAGAGTGGAGCACAAGAATATAGCTCATCTCCTTGGA
ATTTGCATAGAGGATCCTGATCTGATATCTGTTTACGATTTTCATTCAAAAGGGAATTTG
GAAGAAAATATACATGGAAGAACCAAATCAGTATTGCCATGGGAAAGAAGATTCAAAATA
GCCGTTGGAATCGCAGAAGCTTTAAATTACCTACACAATGAATGTCGAAGGCCTGTTATT
CACAGAGATATCAAGTCATCAAACATTCTTCTCAATGATGATTTTGAACCACAGCTATCC
GATTTTGGGTTAGCGATATGGGGACCCACAAAGGCGTCGTTCTTGACTCATAGTGATGTG
GTAGGAACATTTGGTTATCTAGCACCAGAGTATTTTATGTATGGGAAAGTTAGCGATAAG
ATTGATGTCTACTCCTTTGGAGTGGTTTTGCTGGAACTATTATCAGGGAGAAAAGCTATT
GGCTTTGAGACTCCCAGTGGTCAAGAAAGTTTGGTTATGTGGGCGAAACCTAAGTTAGAA
AGCAGGAATTTCAATGCCATTCTGGATGAGAACTTGAATGTAAATATTGAAGATGATCAA
GTCCAAAGAATGATTCTTGCAGCAAGACTCTGTCTTACACAGGCAGCACGACTACGTCCT
AACATAAGCCAGATACTAAAGATGTTGAAGGGGGAGAAAGATGGGAATGAAGAAGTAATT
GCTAGAAACAACAATACGGAAGAATATAATGATGATGAAGTATATCCAGATTCAAGTGCA
GAGTCTCATTTAAGTCTTGCATTTCTTGATGTTAATTATGATAATTCGACATGTTTCAGC
AGTAGTCAAGACCAAAGCAGTCCTCTTTCTTCAGTAGATGAATATTTGAGAAAAAGATGG
AGCAGATCATCAAGCTCTGAATATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400010976
PEP Infomation

pacid=37436112 transcript=PGSC0003DMT400015833 locus=PGSC0003DMG402006188 ID=PGSC0003DMT400015833.v4.03 annot-version=v4.03
Sequence

MIFAKILESEKRNVIVGIRFDGHIRELLNWATVKVAEPGDRVIALHVCRNAESIANVKSS
LDTYLYDYDGLCNKKQVDLISVVTEGSSIRRVLVREAKNYAALAVIVGTCKHSTLGGWTS
IAKYCAKKLPTTTEVMAIDNGKVLFRRTSTSQLKGSFSDPKPSLYLERISTLKDCESEFG
ESEISEFGRFSCEVSRTLERWTNGTQNVKEENTTPSGKHKKGSLSLGSVSLPTEDCAAAT
TTPGWPLLQTTSSLNEPVKVKRKMSVVQWVMTLPNRSMLDSPKSNSSPKENKNAFGMENS
YSLMDFIEKESASVGSQLIKDYFGCKWFSYDVLRSSTSNFSSEKLIGKGGENSVYKAVLS
DGKSVAVKVLNSSEEARKNFRQEMDIMTRVEHKNIAHLLGICIEDPDLISVYDFHSKGNL
EENIHGRTKSVLPWERRFKIAVGIAEALNYLHNECRRPVIHRDIKSSNILLNDDFEPQLS
DFGLAIWGPTKASFLTHSDVVGTFGYLAPEYFMYGKVSDKIDVYSFGVVLLELLSGRKAI
GFETPSGQESLVMWAKPKLESRNFNAILDENLNVNIEDDQVQRMILAARLCLTQAARLRP
NISQILKMLKGEKDGNEEVIARNNNTEEYNDDEVYPDSSAESHLSLAFLDVNYDNSTCFS
SSQDQSSPLSSVDEYLRKRWSRSSSSEY*

Transcript Sequence

Transcript ID

PGSC0003DMT400015833
Transcript Infomation

pacid=37436112 locus=PGSC0003DMG402006188 ID=PGSC0003DMT400015833.v4.03 annot-version=v4.03
Sequence

ATGATTTTTGCAAAGATATTAGAATCAGAAAAGAGAAATGTAATTGTGGGAATTCGATTT
GATGGACATATTAGAGAGTTATTGAATTGGGCTACTGTAAAAGTTGCAGAACCTGGAGAT
AGAGTTATTGCTCTACATGTTTGTCGAAATGCCGAATCAATTGCAAACGTTAAATCCTCG
TTGGACACTTATCTTTATGATTACGATGGCTTGTGTAATAAAAAGCAGGTTGATCTTATT
TCTGTGGTGACAGAAGGAAGTTCTATTAGAAGAGTTTTGGTGAGGGAAGCAAAGAACTAT
GCTGCATTAGCTGTAATAGTAGGAACTTGCAAGCATAGTACTCTTGGGGGCTGGACCTCA
ATTGCTAAATATTGTGCGAAGAAGCTGCCTACCACTACTGAAGTTATGGCAATTGACAAT
GGGAAAGTTTTGTTTAGAAGAACCTCTACTTCCCAACTCAAAGGTTCTTTTAGTGATCCA
AAACCAAGTCTTTATCTAGAAAGAATTTCTACTTTAAAAGATTGCGAGTCTGAATTTGGT
GAATCTGAGATATCGGAATTTGGAAGGTTCAGTTGTGAAGTGTCTAGAACTTTGGAGAGA
TGGACAAATGGTACACAGAACGTAAAAGAGGAAAATACAACTCCTTCAGGAAAACACAAG
AAAGGTTCTCTTTCACTAGGTTCAGTTTCTCTTCCTACCGAAGATTGTGCTGCTGCTACT
ACTACTCCTGGTTGGCCCCTTTTACAAACGACGAGCTCATTGAATGAACCTGTTAAGGTA
AAAAGAAAGATGTCGGTAGTGCAGTGGGTGATGACCTTGCCAAACAGATCGATGTTAGAT
AGTCCTAAATCAAATTCTTCTCCGAAAGAGAACAAAAATGCTTTTGGAATGGAAAATAGT
TACTCCCTCATGGATTTTATCGAAAAGGAAAGTGCATCAGTTGGTAGCCAGCTGATAAAA
GATTATTTTGGCTGCAAATGGTTTAGCTATGATGTTTTAAGATCATCGACTTCTAACTTC
TCCTCGGAGAAGTTGATCGGTAAAGGAGGGGAAAACAGTGTATACAAAGCGGTCCTTTCT
GATGGAAAATCAGTGGCGGTGAAGGTTTTGAATTCATCAGAGGAAGCAAGGAAGAATTTC
AGGCAGGAAATGGACATTATGACCAGAGTGGAGCACAAGAATATAGCTCATCTCCTTGGA
ATTTGCATAGAGGATCCTGATCTGATATCTGTTTACGATTTTCATTCAAAAGGGAATTTG
GAAGAAAATATACATGGAAGAACCAAATCAGTATTGCCATGGGAAAGAAGATTCAAAATA
GCCGTTGGAATCGCAGAAGCTTTAAATTACCTACACAATGAATGTCGAAGGCCTGTTATT
CACAGAGATATCAAGTCATCAAACATTCTTCTCAATGATGATTTTGAACCACAGCTATCC
GATTTTGGGTTAGCGATATGGGGACCCACAAAGGCGTCGTTCTTGACTCATAGTGATGTG
GTAGGAACATTTGGTTATCTAGCACCAGAGTATTTTATGTATGGGAAAGTTAGCGATAAG
ATTGATGTCTACTCCTTTGGAGTGGTTTTGCTGGAACTATTATCAGGGAGAAAAGCTATT
GGCTTTGAGACTCCCAGTGGTCAAGAAAGTTTGGTTATGTGGGCGAAACCTAAGTTAGAA
AGCAGGAATTTCAATGCCATTCTGGATGAGAACTTGAATGTAAATATTGAAGATGATCAA
GTCCAAAGAATGATTCTTGCAGCAAGACTCTGTCTTACACAGGCAGCACGACTACGTCCT
AACATAAGCCAGATACTAAAGATGTTGAAGGGGGAGAAAGATGGGAATGAAGAAGTAATT
GCTAGAAACAACAATACGGAAGAATATAATGATGATGAAGTATATCCAGATTCAAGTGCA
GAGTCTCATTTAAGTCTTGCATTTCTTGATGTTAATTATGATAATTCGACATGTTTCAGC
AGTAGTCAAGACCAAAGCAGTCCTCTTTCTTCAGTAGATGAATATTTGAGAAAAAGATGG
AGCAGATCATCAAGCTCTGAATATTAG