Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015811
CDS Infomation

pacid=37440143 polypeptide=PGSC0003DMP400010962 locus=PGSC0003DMG400006179 ID=PGSC0003DMT400015811.v4.03 annot-version=v4.03
Sequence

ATGACTTTTGTATTCAGTTACAATTCGCCGGTCGGAAAATGGCTCGGCTTCGTTGCTGCC
GTTTGGGTACAAGCAATTTCCGGCAACAATTACACTTTCTCTAACTATTCGGACGCTTTA
AAGTCTCTAATGGCACTTACTCAGCTCCAATTAAACAATCTCTCAGTCGCTAAGGATGTC
GGAAAAGCGTTTGGAATACTCGCCGGACTTGCCTCCGACCGTCTATCAACTCCGATTATT
CTTCTCATTGGAGGAATTGAAGGTTTCATTGGTTACGGTGTTCAATGGCTTGTCGTTAGT
GGTACAATTAAACCTCTTCCTTACTGGGTCATGTGTATATTTTTATGCATGGGAGGTAAC
AGTACTACATGGATGAACACCGCCGTTTTAGTTACCTGTATAAGGAATTTCAGGAAAAAC
AGGGGACCTGTAACCGGAATTTTGAAAGGATATGTTGGATTGAGTACGGCAATATTCACT
GATATTTGTTCGGCGTTATTTTCCAGCGATCCTGCTACTTTCTTACTCATACTTGCCGTA
GTTCCTTTTACCGTTTGTCTCACGGCGATTCTCTTTCTCCGTGAAATTCCACCTTCCTCA
ACTTCCGCAGAAGAAAAGGAAGAGGTCAAATACTTCGGCGTCATTAACATAATTGCCGTC
ATTATAGCGGTATATTTGTTAGTATTTGACATTTCCGGAACTCATGGCAAAGTTTTTTCA
CAATTTTTTGCTGCAATACTTCTGGTACTTATAGCATCGCCTTTGTTCATTCCGATTCAC
CTTATGGTGAAAAATTTTATCCGCGAAAATTCAGAGAACTTAGACGTTGAAGGGAATAAC
AATATTGCAGAGCCATTACTGGGCGTTGAAGAAACGGTTAGAGAAGAAGTTGAGAAAAAG
GAGGTTGTTGTAGTGGAGGAAAATACGGTGCCAGCTGTAGTGGAGAAACGGCCACCTGTT
ATTGGAGAAGATCACACAATTTTCGAGGCAATAAGGACTCTGGATTTCTGGATCTTGTTT
GTATCATTTCTTTGTGGAGTTGGAACAGGTTTGACTGTTATGAACAATTTGGGGCAAATG
GGATTAGCTCTGGGATATGTTGATGTTTCCATTTTCGTCTCCCTCACCAGCATTTGGGGA
TTTTTCGGTCGCATTATTTCCGGCTCCGTCTCCGAATACTTCATCAAGAAAGCTGCAGTG
CCAAGGCCAATATGGAATGCGGCTTCACAGATTCTGATGGCTGTTGGATACATCTGTTTA
GCAATGGCTATGCCAGGATCACTCTACATTGGCTCTATTGTCGTTGGAATTTGCTATGGA
GTTCGTCTTGCCATTTCTGTTCCAGCTGCTTCTGAACTCTTTGGTCTCAAATATTACGGT
CTCATTTATAATGTCCTAATTCTCAACCTTCCACTCGGCTCATTTCTCTTCTCTGGTTTG
CTTGCGGGTCTGTTATATGATGCTCAGGCTACAACAACAGCTGATGGTGGTAACACTTGT
GTAGGTGCTCACTGCTACAGGCTTGTATTCATAGTTATGGCTATAGCTTGCATCGTTGGG
TTCGGCTTGGATATTTTGTTATCCATTAGAACCAAGAGTTTATATGGTAAGATTTATGCA
AGCAGGAAATCCAAGAAGACTAGCACTATATTGTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400010962
PEP Infomation

pacid=37440143 transcript=PGSC0003DMT400015811 locus=PGSC0003DMG400006179 ID=PGSC0003DMT400015811.v4.03 annot-version=v4.03
Sequence

MTFVFSYNSPVGKWLGFVAAVWVQAISGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDV
GKAFGILAGLASDRLSTPIILLIGGIEGFIGYGVQWLVVSGTIKPLPYWVMCIFLCMGGN
STTWMNTAVLVTCIRNFRKNRGPVTGILKGYVGLSTAIFTDICSALFSSDPATFLLILAV
VPFTVCLTAILFLREIPPSSTSAEEKEEVKYFGVINIIAVIIAVYLLVFDISGTHGKVFS
QFFAAILLVLIASPLFIPIHLMVKNFIRENSENLDVEGNNNIAEPLLGVEETVREEVEKK
EVVVVEENTVPAVVEKRPPVIGEDHTIFEAIRTLDFWILFVSFLCGVGTGLTVMNNLGQM
GLALGYVDVSIFVSLTSIWGFFGRIISGSVSEYFIKKAAVPRPIWNAASQILMAVGYICL
AMAMPGSLYIGSIVVGICYGVRLAISVPAASELFGLKYYGLIYNVLILNLPLGSFLFSGL
LAGLLYDAQATTTADGGNTCVGAHCYRLVFIVMAIACIVGFGLDILLSIRTKSLYGKIYA
SRKSKKTSTILS*

Transcript Sequence

Transcript ID

PGSC0003DMT400015811
Transcript Infomation

pacid=37440143 locus=PGSC0003DMG400006179 ID=PGSC0003DMT400015811.v4.03 annot-version=v4.03
Sequence

ATGACTTTTGTATTCAGTTACAATTCGCCGGTCGGAAAATGGCTCGGCTTCGTTGCTGCC
GTTTGGGTACAAGCAATTTCCGGCAACAATTACACTTTCTCTAACTATTCGGACGCTTTA
AAGTCTCTAATGGCACTTACTCAGCTCCAATTAAACAATCTCTCAGTCGCTAAGGATGTC
GGAAAAGCGTTTGGAATACTCGCCGGACTTGCCTCCGACCGTCTATCAACTCCGATTATT
CTTCTCATTGGAGGAATTGAAGGTTTCATTGGTTACGGTGTTCAATGGCTTGTCGTTAGT
GGTACAATTAAACCTCTTCCTTACTGGGTCATGTGTATATTTTTATGCATGGGAGGTAAC
AGTACTACATGGATGAACACCGCCGTTTTAGTTACCTGTATAAGGAATTTCAGGAAAAAC
AGGGGACCTGTAACCGGAATTTTGAAAGGATATGTTGGATTGAGTACGGCAATATTCACT
GATATTTGTTCGGCGTTATTTTCCAGCGATCCTGCTACTTTCTTACTCATACTTGCCGTA
GTTCCTTTTACCGTTTGTCTCACGGCGATTCTCTTTCTCCGTGAAATTCCACCTTCCTCA
ACTTCCGCAGAAGAAAAGGAAGAGGTCAAATACTTCGGCGTCATTAACATAATTGCCGTC
ATTATAGCGGTATATTTGTTAGTATTTGACATTTCCGGAACTCATGGCAAAGTTTTTTCA
CAATTTTTTGCTGCAATACTTCTGGTACTTATAGCATCGCCTTTGTTCATTCCGATTCAC
CTTATGGTGAAAAATTTTATCCGCGAAAATTCAGAGAACTTAGACGTTGAAGGGAATAAC
AATATTGCAGAGCCATTACTGGGCGTTGAAGAAACGGTTAGAGAAGAAGTTGAGAAAAAG
GAGGTTGTTGTAGTGGAGGAAAATACGGTGCCAGCTGTAGTGGAGAAACGGCCACCTGTT
ATTGGAGAAGATCACACAATTTTCGAGGCAATAAGGACTCTGGATTTCTGGATCTTGTTT
GTATCATTTCTTTGTGGAGTTGGAACAGGTTTGACTGTTATGAACAATTTGGGGCAAATG
GGATTAGCTCTGGGATATGTTGATGTTTCCATTTTCGTCTCCCTCACCAGCATTTGGGGA
TTTTTCGGTCGCATTATTTCCGGCTCCGTCTCCGAATACTTCATCAAGAAAGCTGCAGTG
CCAAGGCCAATATGGAATGCGGCTTCACAGATTCTGATGGCTGTTGGATACATCTGTTTA
GCAATGGCTATGCCAGGATCACTCTACATTGGCTCTATTGTCGTTGGAATTTGCTATGGA
GTTCGTCTTGCCATTTCTGTTCCAGCTGCTTCTGAACTCTTTGGTCTCAAATATTACGGT
CTCATTTATAATGTCCTAATTCTCAACCTTCCACTCGGCTCATTTCTCTTCTCTGGTTTG
CTTGCGGGTCTGTTATATGATGCTCAGGCTACAACAACAGCTGATGGTGGTAACACTTGT
GTAGGTGCTCACTGCTACAGGCTTGTATTCATAGTTATGGCTATAGCTTGCATCGTTGGG
TTCGGCTTGGATATTTTGTTATCCATTAGAACCAAGAGTTTATATGGTAAGATTTATGCA
AGCAGGAAATCCAAGAAGACTAGCACTATATTGTCTTGA