Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015793
CDS Infomation

pacid=37436296 polypeptide=PGSC0003DMP400010951 locus=PGSC0003DMG401006174 ID=PGSC0003DMT400015793.v4.03 annot-version=v4.03
Sequence

ATGGGTTTTGTGAGTACGATTTTGGGTTTTTGTGGATTTGGAGTTGGGGTTTCATGTGGA
TTGACGATCGGTTACTATCTATTCATCTATTTCCAGCCCTGTGATGTTAAGGACCCTGTT
ATTCGTCCATTGGTTGAGCGAGATTCTAAAAGCTTGCAGCAGTTGCTGTCTGAAATTCCT
CTCTGGGTCAAATGTCCGGATTATGACCGTGTGGACTGGCTCAACAAATTTCTTGAGTAT
ATGTGGCCTTACCTGGACAAGGCAATTTGCAGGACTGCAAAAGATATTGCGGCACCAATT
ATTGCTGAACAAATACCGAAGTATAAAATTGATTCTGTTGAATTTGAAACACTAACTTTG
GGGTCCTTACCTCCTACTTTCCAGGGGATGAAGGTCTATGTTACTGAAGAAAAAGAATTG
ATCATGGAACCATCAATAAAGTGGGCTGGAAATCCTGATGTTACTGTTGCGGTCAAAGCA
TTCGGATTGAAAGCAACTGTTCAGGTTGTGGACTTGCAGGTTTTTGCAGCTCCACGTATT
ACTCTGAAGCCTCTGGTTCCAAGCTTTCCATGTTTTGCCAATATCTCTGTGTCCCTCATG
GAAAAGCCACATGTTGACTTTGGATTGAAGCTTTTGGGGGCTGATCTTATGTCCATCCCT
GGCCTGTACAGGTTTGTCCAGGAGACCATTAAAGATCAAGTTGCTAACATGTATCTTTGG
CCTAAAACTCTAGAAGTACAGATATTGGATCCATCCAAAGCAATGAAAAAACCTGTTGGG
GTCCTGCATGTGAAGATTCTGAGGGCAATGAATCTGAAAAAGAAAGATCTATTGGGTGCA
TCTGATCCTTACGTAAAACTTAAGCTCACTGAGTCAAAACTTCCTTCAAAGAAAACCCCT
GTAAGGCATAAGAATTTAAATCCAGAGTGGAATGAGGAATTTAATATGGTTGTTAAAGAT
CCAGAATCGCAAGCATTGGAGCTCTCTGTTTATGATTGGGAGCAGATTGGCAAGCATGAT
AAGATGGGCATGAACGTTATTCCACTGAAAGATTTGACTCCTGATGAATCAAAAACGATG
ACACTGAATCTCCTAAAGAATATGGATGCGAATGATGCTCAAAATGATAAGGACCGTGGT
CAGATCATGGTGGAATTAACCTACAAACCATTTAAGGAGGATGAGTTGCCAAAAGATTTT
GAAGATAATGATGCAGCACATAAGGTTCCAGAAGGAACGCCACCAGGGGGAGGCGTCCTT
ATGATTATTGTCCACGAAGCTCAAGATGTTGAAGGAAAGCACCATACTAATCCATATGTC
AAGATTCTTTTCAAAGGAGAGGAGAGAAAAACTAAGCAAGTCAAGAAGAACAGGGATCCA
AGATGGGGAGAGGAGTTTAATTTTGTGTTGGAGGAGCCTCCTGTGAATGATAGGCTGCAT
ATGGAAGTTGTCAGCACCTCTACAAGGATTGGCCTATTGCATCCTAAGGAGACATTGGGT
TATGTTGATATAAATCTTTCCGATGTTGTTAGCAACAAAAGGATCAATGAGAAGTACCAC
CTCATTGATTCAAAGAACGGTCGCCTTCAAGTTGAGCTGCAATGGCGAACTGCTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400010951
PEP Infomation

pacid=37436296 transcript=PGSC0003DMT400015793 locus=PGSC0003DMG401006174 ID=PGSC0003DMT400015793.v4.03 annot-version=v4.03
Sequence

MGFVSTILGFCGFGVGVSCGLTIGYYLFIYFQPCDVKDPVIRPLVERDSKSLQQLLSEIP
LWVKCPDYDRVDWLNKFLEYMWPYLDKAICRTAKDIAAPIIAEQIPKYKIDSVEFETLTL
GSLPPTFQGMKVYVTEEKELIMEPSIKWAGNPDVTVAVKAFGLKATVQVVDLQVFAAPRI
TLKPLVPSFPCFANISVSLMEKPHVDFGLKLLGADLMSIPGLYRFVQETIKDQVANMYLW
PKTLEVQILDPSKAMKKPVGVLHVKILRAMNLKKKDLLGASDPYVKLKLTESKLPSKKTP
VRHKNLNPEWNEEFNMVVKDPESQALELSVYDWEQIGKHDKMGMNVIPLKDLTPDESKTM
TLNLLKNMDANDAQNDKDRGQIMVELTYKPFKEDELPKDFEDNDAAHKVPEGTPPGGGVL
MIIVHEAQDVEGKHHTNPYVKILFKGEERKTKQVKKNRDPRWGEEFNFVLEEPPVNDRLH
MEVVSTSTRIGLLHPKETLGYVDINLSDVVSNKRINEKYHLIDSKNGRLQVELQWRTAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400015793
Transcript Infomation

pacid=37436296 locus=PGSC0003DMG401006174 ID=PGSC0003DMT400015793.v4.03 annot-version=v4.03
Sequence

ATGGGTTTTGTGAGTACGATTTTGGGTTTTTGTGGATTTGGAGTTGGGGTTTCATGTGGA
TTGACGATCGGTTACTATCTATTCATCTATTTCCAGCCCTGTGATGTTAAGGACCCTGTT
ATTCGTCCATTGGTTGAGCGAGATTCTAAAAGCTTGCAGCAGTTGCTGTCTGAAATTCCT
CTCTGGGTCAAATGTCCGGATTATGACCGTGTGGACTGGCTCAACAAATTTCTTGAGTAT
ATGTGGCCTTACCTGGACAAGGCAATTTGCAGGACTGCAAAAGATATTGCGGCACCAATT
ATTGCTGAACAAATACCGAAGTATAAAATTGATTCTGTTGAATTTGAAACACTAACTTTG
GGGTCCTTACCTCCTACTTTCCAGGGGATGAAGGTCTATGTTACTGAAGAAAAAGAATTG
ATCATGGAACCATCAATAAAGTGGGCTGGAAATCCTGATGTTACTGTTGCGGTCAAAGCA
TTCGGATTGAAAGCAACTGTTCAGGTTGTGGACTTGCAGGTTTTTGCAGCTCCACGTATT
ACTCTGAAGCCTCTGGTTCCAAGCTTTCCATGTTTTGCCAATATCTCTGTGTCCCTCATG
GAAAAGCCACATGTTGACTTTGGATTGAAGCTTTTGGGGGCTGATCTTATGTCCATCCCT
GGCCTGTACAGGTTTGTCCAGGAGACCATTAAAGATCAAGTTGCTAACATGTATCTTTGG
CCTAAAACTCTAGAAGTACAGATATTGGATCCATCCAAAGCAATGAAAAAACCTGTTGGG
GTCCTGCATGTGAAGATTCTGAGGGCAATGAATCTGAAAAAGAAAGATCTATTGGGTGCA
TCTGATCCTTACGTAAAACTTAAGCTCACTGAGTCAAAACTTCCTTCAAAGAAAACCCCT
GTAAGGCATAAGAATTTAAATCCAGAGTGGAATGAGGAATTTAATATGGTTGTTAAAGAT
CCAGAATCGCAAGCATTGGAGCTCTCTGTTTATGATTGGGAGCAGATTGGCAAGCATGAT
AAGATGGGCATGAACGTTATTCCACTGAAAGATTTGACTCCTGATGAATCAAAAACGATG
ACACTGAATCTCCTAAAGAATATGGATGCGAATGATGCTCAAAATGATAAGGACCGTGGT
CAGATCATGGTGGAATTAACCTACAAACCATTTAAGGAGGATGAGTTGCCAAAAGATTTT
GAAGATAATGATGCAGCACATAAGGTTCCAGAAGGAACGCCACCAGGGGGAGGCGTCCTT
ATGATTATTGTCCACGAAGCTCAAGATGTTGAAGGAAAGCACCATACTAATCCATATGTC
AAGATTCTTTTCAAAGGAGAGGAGAGAAAAACTAAGCAAGTCAAGAAGAACAGGGATCCA
AGATGGGGAGAGGAGTTTAATTTTGTGTTGGAGGAGCCTCCTGTGAATGATAGGCTGCAT
ATGGAAGTTGTCAGCACCTCTACAAGGATTGGCCTATTGCATCCTAAGGAGACATTGGGT
TATGTTGATATAAATCTTTCCGATGTTGTTAGCAACAAAAGGATCAATGAGAAGTACCAC
CTCATTGATTCAAAGAACGGTCGCCTTCAAGTTGAGCTGCAATGGCGAACTGCTTCTTGA