Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015741
CDS Infomation

pacid=37431948 polypeptide=PGSC0003DMP400010909 locus=PGSC0003DMG400006150 ID=PGSC0003DMT400015741.v4.03 annot-version=v4.03
Sequence

ATGTTCTCTCCGGGAACAAAGAGATCAAATTTCAGTGCTCGTAAGAGTGGCCGTGAAATA
CCTACTACTGGTTCACCGGTGACGCCGTTCACCGAGAATAGAAAGCCGCTTGATGATAAT
TCTCCTATACCTAATCGCCCTAATACTGGTACTCCTGCTCCATGGGCTTCCCGTCTTTCT
GTTCTCGCTAGAATCCCGCCTGCGAAGAAGAGTGATAAAGGAGAAGAGACTGATCCAATT
CAACCTGTCTATGTCGGAGAGTTCCCACAAGTCCTACGCGATGAACAGGACGTTTTGCTT
CAGAAATATGCTCCTGGTAATGCGTCCATCTCTGGCGGAATGGATAAGGAAACTTCCTTG
GCGTGGGTTATATGTGGCAACAAACTCTTTGTTTGGAGTTACTTATCACCTGCAGCTTCT
AGGAACTGCATTGTTCTTGATCTTCCTTCGACGATGTCTGAAAATGAAGATACTGGAAAA
TCTTCTAATGATTGGTTTGTTTGTCTCATCAATTGGGATAGGAATACCAATAAAGTTTCC
CCACAGTGCAGTTCTGCTGGTATTGTTGCCTGTAATCGGAGAACTCGAAATCTCGTATAC
TGGCCAGATATCTACTCTGCAACTCGGAATGAACCAGTAGTAAGTTTTCCTGAGGAGTCT
GAGGTGAGTTGTTCTTCTTCTGATGTGAAGGGCACCCCAACCAAGTTGCGGCAGCAGAAT
AAACCTGGGAGCAGTGTTACTCGTTCAAATTCTCTCAACTGTTTGATTGCTTGTGCCGTC
CCTGAGGCTCATCACAATCATGCCTTTGTTGCTCTTGCTTGTAGTTCTAATGGCGAACTT
TGGCAATTTGTCTGCAGCCCCAGTGGTATTCAGCGCAGAAAGATGTATGAGGACATGTTA
AGTAAGAACTCTCAAGGAAATGATGGTGGGCAGTTCTTTGGAGGCAGGGGTTACCCTAGA
TCACTGGTTTGGCAGTCTCGTTCCCATTCTTTGGACAAGTCCAACAGGCAGTTTCTTTTA
TTGACAGATCATGAAATACAATGTTTTGCTATTGAACTTTCTCCCTCTTTCAATGTTTCT
AAGATCTGGACTCATGAAATCGTTGGCACTGATGGTGATCTGGGTATCCAGAAGGATCTG
GCAGGGCAGAAGCGTATTTGGCCTCTGGATTTGCAGATTGATAATGATGGCAAGGTTATT
ACTATTCTCATTGCAATTTTTTGCAAGGATCGGATCACCAGTTCAAGCTACACTGAGTAT
TCACTTCTAACCATGCAATATAAATCTGGAGTGAATGTCTCCTCAGAATGTGTGCAGCCA
CATGAAAGGATTTTAGAGAAAAAGGCTCCTATCCAAGTGATAATTCCTAAAGCTAGACTT
GAGGATGAAGAGTTTTTATTCTCTATGAGATTGAAGGTTGGGGGTAAGCCAGCTGGTTCA
GTGATCATACTTTCTGGTGATGGCACTGCAACTGTCTCACATTACTGGAGAAATTCTACC
CGTCTTTATCAATTTGATCTTCCATATGATGCTGGAAGGGTTCTTGATGCATCAGTTTTC
CCTTCCGATGATGGTGAGGATGGCGCTTGGGCTGTTCTAACTGAAAAAGCTGGAGTTTGG
GCTATACCTGAGAGGGCAGTTTTACTTGGTGGAGTTGAACCACCGGAGAGAAGTTTGTCA
CGTAAAGGAAGCTCTAATGAGAGGTCCTCTCTGGAAGAGAGGAAAAATTTATCTTTTGCA
GGTAATATTGCTCCAAGAAGGGCAACTTCAGAAGCATGGGATGCTGGAGATAAACAAAGG
CCTGGTCTAACTGGAATTGCACGTCGAAATGCTCAAGATGAAGAATCTGAAGCTTTACTA
AATCAACTTTTCCATGAGTTTCTTTTATCTGGGCATGCGGATGGTGCTTTCGATAAACTG
AAGATGTCAGGGGCATTTGAAAGAGAGGGTGAAACAAATGTTTTTGCAAGGACAAGCAAA
TCAATTGTGGATACCCTTGCAAAACATTGGACAACCACCAGAGGTGCTGAGATTGTGATT
TCGTCTGTCGTGTCCTCGCAACTTTTGGAGAAGCAGCAGAAGCATAAAAGATTCCTTCAA
TTCCTGGCTTTATCCAAGTGCCATGAAGAACTATGTTCTAGACAGAGGCATGCTTTGCAT
ATTATCATGGAACATGGTGAAAAACTTGCTGGCATGATCCAATTGAGAGAGTTGCAGAAC
GTGCTCAATCAGAACCGTGCCTCAGGAGCTGGCTCTTATTCAACTACTGAGATGTCGGTT
TCTGGTTCCCTGTGGGATGTCATCCAATTGGTAGGCGAAAAAGCTCGCCGAAGAACAGTT
CTTTTGATGGATAGGGATAATGCTGAAGTTTTCTACAGTAAGGTCTCAGACCTTGACGAA
TTTTTTTATTGCTTAGAGAGAGACCTCGATTACATTATCAGTGAAAAGATGACAGTTTCT
GTTCTATTCCAAAGAGCATGTGAACTCTCCAGTGCCTGTGTGACTTTGCTTCGCACAGCC
ATGACTTGCAGAAATGAAAATCACCTCTGGTATCCTCCGTCTGAGGGATTGACTCCATGG
ACTTGTCAAGAAAAGGTGCGGAATGGGCTCTGGAGCCTTGCATATTTTATGCTTCAACTG
GTGAAGGAAAATAATTCCCTGGATGTTACCGTAAAGTTAGATTTTCATGCACACCTTGAA
GTTCTATCTGATGTACTATTGGAAGCATATTCTGGTGCTATCTGTGCGAAAGTTGAGCGT
GGAGAAGGACACAAAAGTCTGTTAGATGAGTACTGTAATAGAAGAGATGAACTCTTGGAA
TGTCTTTACCAGCAAGTGAAAGATTTAGTTGAAGGCAAACTGCAGGATTTAGGTGAAGCA
GCTGAGGAGCAAAAGCTAGAGATTTTTGGAAAGCTTTCCTCAGCCTTGTTGTCTCTTGCA
AAAAGACATGAAGGTTACAAAACTCTATGGAGTATATGCTGTGATCTCAATAATACTGAC
CTACTTAAAAATCTTATGCATGACAGCATGGGACCTAAACGAGGCTTTAGTTACTTTGTG
TTTCAACAACTGTATGACAACAGACAGTTCTCTAAGCTTATGAGACTTGGGGAGGAATTT
CAGGAAGACCTAGCAATATTTTTGAAACAGCATCAGGATCTCCTTTGGCTTCATGAAATA
TTCCTTCATCAATTTTCTGAAGCTTCTGAAACTCTACATGTTTTGTCTCTTTCACCAAAT
GATAGCTTCGCTATGGATACTGAAACCAACTCATTTGGCACCACCATAAAATCAAGTTTG
GTGGAAAGAAGGCGGCTTCTGAATCTCTCGAAAGTAGCTGCATTGGCAGGAAGAAGTGCT
AATTTTGAATCAAAGGTGAAGCGCATAGAGGCTGATTTAAAGATTCTGAACTTGCAGGAA
GAAATAATGAAACTCCTTCCGGACGATGAAAGGCAAAATATTAGCCAGCAGCTTCTCCCT
CCGGTGGACCTTATTGAATTGTGCCTTAAAACTCAGGATAGGGAGCTTTCGTTGAGAGTT
TTTGACATTTTTGCATGGACCAGCTCCTCTTTTATCAAGTCTAATGCAAGCCTCTTGGAG
GACTGCTGGAGAAATGCCTCCAACCAGGATGACTGGGAAAGGCTGTATCAAGCATCAGTA
GATGAGGGGTGGGGTGATGAGGAGACTTTGAGCATTCTAAAAGACACCATTCTTTTCCAG
GCTTCCAGCAGGTGCTATGGCCTCAAAGCTGAAACTTTTGAGGGCAATTTCCAGGAAGTG
CTGCCACTGAGGCTAGAAAATTCCGAGCAAGTGACTTTAAAGAACATGGGATCCTCTGTG
GAAACAATACTGATGCAGCACAAGGATTATCCTGATGCCGGCAAGTTAATGCTCACATCA
ATTATGCTAGGAAGTGTTCATTCCGATACCATTAGTATTGTGGAAGAGGAGGGACCTACC
CCAATGGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400010909
PEP Infomation

pacid=37431948 transcript=PGSC0003DMT400015741 locus=PGSC0003DMG400006150 ID=PGSC0003DMT400015741.v4.03 annot-version=v4.03
Sequence

MFSPGTKRSNFSARKSGREIPTTGSPVTPFTENRKPLDDNSPIPNRPNTGTPAPWASRLS
VLARIPPAKKSDKGEETDPIQPVYVGEFPQVLRDEQDVLLQKYAPGNASISGGMDKETSL
AWVICGNKLFVWSYLSPAASRNCIVLDLPSTMSENEDTGKSSNDWFVCLINWDRNTNKVS
PQCSSAGIVACNRRTRNLVYWPDIYSATRNEPVVSFPEESEVSCSSSDVKGTPTKLRQQN
KPGSSVTRSNSLNCLIACAVPEAHHNHAFVALACSSNGELWQFVCSPSGIQRRKMYEDML
SKNSQGNDGGQFFGGRGYPRSLVWQSRSHSLDKSNRQFLLLTDHEIQCFAIELSPSFNVS
KIWTHEIVGTDGDLGIQKDLAGQKRIWPLDLQIDNDGKVITILIAIFCKDRITSSSYTEY
SLLTMQYKSGVNVSSECVQPHERILEKKAPIQVIIPKARLEDEEFLFSMRLKVGGKPAGS
VIILSGDGTATVSHYWRNSTRLYQFDLPYDAGRVLDASVFPSDDGEDGAWAVLTEKAGVW
AIPERAVLLGGVEPPERSLSRKGSSNERSSLEERKNLSFAGNIAPRRATSEAWDAGDKQR
PGLTGIARRNAQDEESEALLNQLFHEFLLSGHADGAFDKLKMSGAFEREGETNVFARTSK
SIVDTLAKHWTTTRGAEIVISSVVSSQLLEKQQKHKRFLQFLALSKCHEELCSRQRHALH
IIMEHGEKLAGMIQLRELQNVLNQNRASGAGSYSTTEMSVSGSLWDVIQLVGEKARRRTV
LLMDRDNAEVFYSKVSDLDEFFYCLERDLDYIISEKMTVSVLFQRACELSSACVTLLRTA
MTCRNENHLWYPPSEGLTPWTCQEKVRNGLWSLAYFMLQLVKENNSLDVTVKLDFHAHLE
VLSDVLLEAYSGAICAKVERGEGHKSLLDEYCNRRDELLECLYQQVKDLVEGKLQDLGEA
AEEQKLEIFGKLSSALLSLAKRHEGYKTLWSICCDLNNTDLLKNLMHDSMGPKRGFSYFV
FQQLYDNRQFSKLMRLGEEFQEDLAIFLKQHQDLLWLHEIFLHQFSEASETLHVLSLSPN
DSFAMDTETNSFGTTIKSSLVERRRLLNLSKVAALAGRSANFESKVKRIEADLKILNLQE
EIMKLLPDDERQNISQQLLPPVDLIELCLKTQDRELSLRVFDIFAWTSSSFIKSNASLLE
DCWRNASNQDDWERLYQASVDEGWGDEETLSILKDTILFQASSRCYGLKAETFEGNFQEV
LPLRLENSEQVTLKNMGSSVETILMQHKDYPDAGKLMLTSIMLGSVHSDTISIVEEEGPT
PME*

Transcript Sequence

Transcript ID

PGSC0003DMT400015741
Transcript Infomation

pacid=37431948 locus=PGSC0003DMG400006150 ID=PGSC0003DMT400015741.v4.03 annot-version=v4.03
Sequence

ATGTTCTCTCCGGGAACAAAGAGATCAAATTTCAGTGCTCGTAAGAGTGGCCGTGAAATA
CCTACTACTGGTTCACCGGTGACGCCGTTCACCGAGAATAGAAAGCCGCTTGATGATAAT
TCTCCTATACCTAATCGCCCTAATACTGGTACTCCTGCTCCATGGGCTTCCCGTCTTTCT
GTTCTCGCTAGAATCCCGCCTGCGAAGAAGAGTGATAAAGGAGAAGAGACTGATCCAATT
CAACCTGTCTATGTCGGAGAGTTCCCACAAGTCCTACGCGATGAACAGGACGTTTTGCTT
CAGAAATATGCTCCTGGTAATGCGTCCATCTCTGGCGGAATGGATAAGGAAACTTCCTTG
GCGTGGGTTATATGTGGCAACAAACTCTTTGTTTGGAGTTACTTATCACCTGCAGCTTCT
AGGAACTGCATTGTTCTTGATCTTCCTTCGACGATGTCTGAAAATGAAGATACTGGAAAA
TCTTCTAATGATTGGTTTGTTTGTCTCATCAATTGGGATAGGAATACCAATAAAGTTTCC
CCACAGTGCAGTTCTGCTGGTATTGTTGCCTGTAATCGGAGAACTCGAAATCTCGTATAC
TGGCCAGATATCTACTCTGCAACTCGGAATGAACCAGTAGTAAGTTTTCCTGAGGAGTCT
GAGGTGAGTTGTTCTTCTTCTGATGTGAAGGGCACCCCAACCAAGTTGCGGCAGCAGAAT
AAACCTGGGAGCAGTGTTACTCGTTCAAATTCTCTCAACTGTTTGATTGCTTGTGCCGTC
CCTGAGGCTCATCACAATCATGCCTTTGTTGCTCTTGCTTGTAGTTCTAATGGCGAACTT
TGGCAATTTGTCTGCAGCCCCAGTGGTATTCAGCGCAGAAAGATGTATGAGGACATGTTA
AGTAAGAACTCTCAAGGAAATGATGGTGGGCAGTTCTTTGGAGGCAGGGGTTACCCTAGA
TCACTGGTTTGGCAGTCTCGTTCCCATTCTTTGGACAAGTCCAACAGGCAGTTTCTTTTA
TTGACAGATCATGAAATACAATGTTTTGCTATTGAACTTTCTCCCTCTTTCAATGTTTCT
AAGATCTGGACTCATGAAATCGTTGGCACTGATGGTGATCTGGGTATCCAGAAGGATCTG
GCAGGGCAGAAGCGTATTTGGCCTCTGGATTTGCAGATTGATAATGATGGCAAGGTTATT
ACTATTCTCATTGCAATTTTTTGCAAGGATCGGATCACCAGTTCAAGCTACACTGAGTAT
TCACTTCTAACCATGCAATATAAATCTGGAGTGAATGTCTCCTCAGAATGTGTGCAGCCA
CATGAAAGGATTTTAGAGAAAAAGGCTCCTATCCAAGTGATAATTCCTAAAGCTAGACTT
GAGGATGAAGAGTTTTTATTCTCTATGAGATTGAAGGTTGGGGGTAAGCCAGCTGGTTCA
GTGATCATACTTTCTGGTGATGGCACTGCAACTGTCTCACATTACTGGAGAAATTCTACC
CGTCTTTATCAATTTGATCTTCCATATGATGCTGGAAGGGTTCTTGATGCATCAGTTTTC
CCTTCCGATGATGGTGAGGATGGCGCTTGGGCTGTTCTAACTGAAAAAGCTGGAGTTTGG
GCTATACCTGAGAGGGCAGTTTTACTTGGTGGAGTTGAACCACCGGAGAGAAGTTTGTCA
CGTAAAGGAAGCTCTAATGAGAGGTCCTCTCTGGAAGAGAGGAAAAATTTATCTTTTGCA
GGTAATATTGCTCCAAGAAGGGCAACTTCAGAAGCATGGGATGCTGGAGATAAACAAAGG
CCTGGTCTAACTGGAATTGCACGTCGAAATGCTCAAGATGAAGAATCTGAAGCTTTACTA
AATCAACTTTTCCATGAGTTTCTTTTATCTGGGCATGCGGATGGTGCTTTCGATAAACTG
AAGATGTCAGGGGCATTTGAAAGAGAGGGTGAAACAAATGTTTTTGCAAGGACAAGCAAA
TCAATTGTGGATACCCTTGCAAAACATTGGACAACCACCAGAGGTGCTGAGATTGTGATT
TCGTCTGTCGTGTCCTCGCAACTTTTGGAGAAGCAGCAGAAGCATAAAAGATTCCTTCAA
TTCCTGGCTTTATCCAAGTGCCATGAAGAACTATGTTCTAGACAGAGGCATGCTTTGCAT
ATTATCATGGAACATGGTGAAAAACTTGCTGGCATGATCCAATTGAGAGAGTTGCAGAAC
GTGCTCAATCAGAACCGTGCCTCAGGAGCTGGCTCTTATTCAACTACTGAGATGTCGGTT
TCTGGTTCCCTGTGGGATGTCATCCAATTGGTAGGCGAAAAAGCTCGCCGAAGAACAGTT
CTTTTGATGGATAGGGATAATGCTGAAGTTTTCTACAGTAAGGTCTCAGACCTTGACGAA
TTTTTTTATTGCTTAGAGAGAGACCTCGATTACATTATCAGTGAAAAGATGACAGTTTCT
GTTCTATTCCAAAGAGCATGTGAACTCTCCAGTGCCTGTGTGACTTTGCTTCGCACAGCC
ATGACTTGCAGAAATGAAAATCACCTCTGGTATCCTCCGTCTGAGGGATTGACTCCATGG
ACTTGTCAAGAAAAGGTGCGGAATGGGCTCTGGAGCCTTGCATATTTTATGCTTCAACTG
GTGAAGGAAAATAATTCCCTGGATGTTACCGTAAAGTTAGATTTTCATGCACACCTTGAA
GTTCTATCTGATGTACTATTGGAAGCATATTCTGGTGCTATCTGTGCGAAAGTTGAGCGT
GGAGAAGGACACAAAAGTCTGTTAGATGAGTACTGTAATAGAAGAGATGAACTCTTGGAA
TGTCTTTACCAGCAAGTGAAAGATTTAGTTGAAGGCAAACTGCAGGATTTAGGTGAAGCA
GCTGAGGAGCAAAAGCTAGAGATTTTTGGAAAGCTTTCCTCAGCCTTGTTGTCTCTTGCA
AAAAGACATGAAGGTTACAAAACTCTATGGAGTATATGCTGTGATCTCAATAATACTGAC
CTACTTAAAAATCTTATGCATGACAGCATGGGACCTAAACGAGGCTTTAGTTACTTTGTG
TTTCAACAACTGTATGACAACAGACAGTTCTCTAAGCTTATGAGACTTGGGGAGGAATTT
CAGGAAGACCTAGCAATATTTTTGAAACAGCATCAGGATCTCCTTTGGCTTCATGAAATA
TTCCTTCATCAATTTTCTGAAGCTTCTGAAACTCTACATGTTTTGTCTCTTTCACCAAAT
GATAGCTTCGCTATGGATACTGAAACCAACTCATTTGGCACCACCATAAAATCAAGTTTG
GTGGAAAGAAGGCGGCTTCTGAATCTCTCGAAAGTAGCTGCATTGGCAGGAAGAAGTGCT
AATTTTGAATCAAAGGTGAAGCGCATAGAGGCTGATTTAAAGATTCTGAACTTGCAGGAA
GAAATAATGAAACTCCTTCCGGACGATGAAAGGCAAAATATTAGCCAGCAGCTTCTCCCT
CCGGTGGACCTTATTGAATTGTGCCTTAAAACTCAGGATAGGGAGCTTTCGTTGAGAGTT
TTTGACATTTTTGCATGGACCAGCTCCTCTTTTATCAAGTCTAATGCAAGCCTCTTGGAG
GACTGCTGGAGAAATGCCTCCAACCAGGATGACTGGGAAAGGCTGTATCAAGCATCAGTA
GATGAGGGGTGGGGTGATGAGGAGACTTTGAGCATTCTAAAAGACACCATTCTTTTCCAG
GCTTCCAGCAGGTGCTATGGCCTCAAAGCTGAAACTTTTGAGGGCAATTTCCAGGAAGTG
CTGCCACTGAGGCTAGAAAATTCCGAGCAAGTGACTTTAAAGAACATGGGATCCTCTGTG
GAAACAATACTGATGCAGCACAAGGATTATCCTGATGCCGGCAAGTTAATGCTCACATCA
ATTATGCTAGGAAGTGTTCATTCCGATACCATTAGTATTGTGGAAGAGGAGGGACCTACC
CCAATGGAGTAA