Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015732
CDS Infomation

pacid=37434144 polypeptide=PGSC0003DMP400010901 locus=PGSC0003DMG400006146 ID=PGSC0003DMT400015732.v4.03 annot-version=v4.03
Sequence

ATGCTGCCTCCACGCCCCAGCGGGTTGCCTCCATCCTTATTTCTTGCCTCTTCAGACGCC
AGAGCATCAACTGGTAATCATGACCCTGGAATGAACTCTGATCAGAATCGTGAATCGCCT
GCTGAGAGTGCTAATTCAAGAGATACGTGGCCTGTAATTGATGCTGCTACTCAAGTGAAG
CTTGAGAATCAGAAAGATGAGGATGGTTATTATGAACAGTCTGTGACTCACAGGCCTGCT
AGTGCAAATAAGGTTTCTCTTCTTGATATTGCTAGAGAACAAGTGGATATAATATCTGAA
AAAATGTATTTGCTCCCCAATGAGTATTTAGAAGAGCTAAAAGGTAGGCTTCGAGGGATG
CTTGAAGGGAATGGCGGTCCTCAGCAAAGAGATGAACTTCTGTTTTTACAGAGGCTTGTT
CAGACTAGGTCTGATTTGACTGCAAAGACATTGATTAAAGCTCATCGAGTTCAGCTGGAA
ATTCTTGTCGCTATTAATAGCGGAATTCAATTTTTCCTGCATCATAGTATGAATCTTTCT
CAGACTGCACTGATTGAGGTTTTTGTATACAAGAGATGTCGGAATATAGCATGCCAAAGC
CAGTTGCCTGCGGAAGATTGCCACTGTGAGATATGCACCAACCGAAAGGGATTCTGCAGC
CTTTGCATGTGTGTAATCTGTAACAAGTTTGATTTTGAAGTGAATACATGTCGGTGGATT
GGTTGCGACTCCTGTGCTCATTGGACTCACACGGACTGCGCAATTCGTGATAAACAAATT
GGAACAGGTCCTTCTTCTGTGAATGGGCTGGGGTCTGCTGAAATGCAGTTCAGGTGTAGA
GCATGCAATCGCACTTCTGAGCTTTTTGGTTGGGTGAAAGATGTATTCCAACAATGTGCA
CCTACCTGGAATGGGGAATCATTGATAAGAGAACTAACTGTTGTAAGTAAGATCTTTCGA
CTGAGTGACAACACAAGAGGGAGACAGCTGTTTTGGAAGTCTGAGGAGCTCATAGAAAAA
CTAAAGGGTGGAGTGGCAGAGACAACAGCTTGCAGGATTATATTAACTTTTCTCCAAGAG
CTTGAGATGGACTCATCAAGGAGCTTTGAGGCTGGAAATAATGGAAGGACGATTCCCCCC
CAGGAGGCATGCAACCGAATTGCTGCAGTGGTACAAGAAGCAGTGCAGACAATGGGAGTA
GTGGCTGATGAAAAAATGAGGATGCTAAAGAAAGCTCGCCAAGCTCTCGAGACTTGTGAT
CATGAACTGGAGGAAAAAGCTAAAGAAGTTTCAGAACTTAAACTGGAGAGGCAGCGAAAA
AGGCTACAGATAGATGAATTAGAGAGCATTGCTAGGCTTAAAGAAGCAGAAGCAGATATG
TTCCAGCTTAAGGCAGATGAGGCAAGACGAGAAGCTGACAGGTTGCAGAGGATTGCTCTT
GCAAAATCAGGGAAATCAGAAGAAGATTATGCTAGTAGTTACCTTAAACAACGTCTTAGC
GAGGCTGAAGCTGAGAAGCAATTCCTTTTCGAGAAGATTAAACTTCAAGATCAGAGTTCT
CGTTCCTCACAAGGCAATGACATCGGTGACACTTCACAAGAACTTTACTCTAAAATACAA
GAGATCCTAAAGAGTGTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400010901
PEP Infomation

pacid=37434144 transcript=PGSC0003DMT400015732 locus=PGSC0003DMG400006146 ID=PGSC0003DMT400015732.v4.03 annot-version=v4.03
Sequence

MLPPRPSGLPPSLFLASSDARASTGNHDPGMNSDQNRESPAESANSRDTWPVIDAATQVK
LENQKDEDGYYEQSVTHRPASANKVSLLDIAREQVDIISEKMYLLPNEYLEELKGRLRGM
LEGNGGPQQRDELLFLQRLVQTRSDLTAKTLIKAHRVQLEILVAINSGIQFFLHHSMNLS
QTALIEVFVYKRCRNIACQSQLPAEDCHCEICTNRKGFCSLCMCVICNKFDFEVNTCRWI
GCDSCAHWTHTDCAIRDKQIGTGPSSVNGLGSAEMQFRCRACNRTSELFGWVKDVFQQCA
PTWNGESLIRELTVVSKIFRLSDNTRGRQLFWKSEELIEKLKGGVAETTACRIILTFLQE
LEMDSSRSFEAGNNGRTIPPQEACNRIAAVVQEAVQTMGVVADEKMRMLKKARQALETCD
HELEEKAKEVSELKLERQRKRLQIDELESIARLKEAEADMFQLKADEARREADRLQRIAL
AKSGKSEEDYASSYLKQRLSEAEAEKQFLFEKIKLQDQSSRSSQGNDIGDTSQELYSKIQ
EILKSV*

Transcript Sequence

Transcript ID

PGSC0003DMT400015732
Transcript Infomation

pacid=37434144 locus=PGSC0003DMG400006146 ID=PGSC0003DMT400015732.v4.03 annot-version=v4.03
Sequence

ATGCTGCCTCCACGCCCCAGCGGGTTGCCTCCATCCTTATTTCTTGCCTCTTCAGACGCC
AGAGCATCAACTGGTAATCATGACCCTGGAATGAACTCTGATCAGAATCGTGAATCGCCT
GCTGAGAGTGCTAATTCAAGAGATACGTGGCCTGTAATTGATGCTGCTACTCAAGTGAAG
CTTGAGAATCAGAAAGATGAGGATGGTTATTATGAACAGTCTGTGACTCACAGGCCTGCT
AGTGCAAATAAGGTTTCTCTTCTTGATATTGCTAGAGAACAAGTGGATATAATATCTGAA
AAAATGTATTTGCTCCCCAATGAGTATTTAGAAGAGCTAAAAGGTAGGCTTCGAGGGATG
CTTGAAGGGAATGGCGGTCCTCAGCAAAGAGATGAACTTCTGTTTTTACAGAGGCTTGTT
CAGACTAGGTCTGATTTGACTGCAAAGACATTGATTAAAGCTCATCGAGTTCAGCTGGAA
ATTCTTGTCGCTATTAATAGCGGAATTCAATTTTTCCTGCATCATAGTATGAATCTTTCT
CAGACTGCACTGATTGAGGTTTTTGTATACAAGAGATGTCGGAATATAGCATGCCAAAGC
CAGTTGCCTGCGGAAGATTGCCACTGTGAGATATGCACCAACCGAAAGGGATTCTGCAGC
CTTTGCATGTGTGTAATCTGTAACAAGTTTGATTTTGAAGTGAATACATGTCGGTGGATT
GGTTGCGACTCCTGTGCTCATTGGACTCACACGGACTGCGCAATTCGTGATAAACAAATT
GGAACAGGTCCTTCTTCTGTGAATGGGCTGGGGTCTGCTGAAATGCAGTTCAGGTGTAGA
GCATGCAATCGCACTTCTGAGCTTTTTGGTTGGGTGAAAGATGTATTCCAACAATGTGCA
CCTACCTGGAATGGGGAATCATTGATAAGAGAACTAACTGTTGTAAGTAAGATCTTTCGA
CTGAGTGACAACACAAGAGGGAGACAGCTGTTTTGGAAGTCTGAGGAGCTCATAGAAAAA
CTAAAGGGTGGAGTGGCAGAGACAACAGCTTGCAGGATTATATTAACTTTTCTCCAAGAG
CTTGAGATGGACTCATCAAGGAGCTTTGAGGCTGGAAATAATGGAAGGACGATTCCCCCC
CAGGAGGCATGCAACCGAATTGCTGCAGTGGTACAAGAAGCAGTGCAGACAATGGGAGTA
GTGGCTGATGAAAAAATGAGGATGCTAAAGAAAGCTCGCCAAGCTCTCGAGACTTGTGAT
CATGAACTGGAGGAAAAAGCTAAAGAAGTTTCAGAACTTAAACTGGAGAGGCAGCGAAAA
AGGCTACAGATAGATGAATTAGAGAGCATTGCTAGGCTTAAAGAAGCAGAAGCAGATATG
TTCCAGCTTAAGGCAGATGAGGCAAGACGAGAAGCTGACAGGTTGCAGAGGATTGCTCTT
GCAAAATCAGGGAAATCAGAAGAAGATTATGCTAGTAGTTACCTTAAACAACGTCTTAGC
GAGGCTGAAGCTGAGAAGCAATTCCTTTTCGAGAAGATTAAACTTCAAGATCAGAGTTCT
CGTTCCTCACAAGGCAATGACATCGGTGACACTTCACAAGAACTTTACTCTAAAATACAA
GAGATCCTAAAGAGTGTGTAG