Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015699
CDS Infomation

pacid=37434442 polypeptide=PGSC0003DMP400010875 locus=PGSC0003DMG400006135 ID=PGSC0003DMT400015699.v4.03 annot-version=v4.03
Sequence

ATGGGTACTTCTTCAAGTCCAAAAGACTCTTCAATTCTTTATAGTCCACTTTCATCTCCT
AATGTTGGTGCCTTGCTTAAAATCAAGATCATTTCATGGAGTCAAGAAACTGGTTTACCT
GTCACAATTCGAGTTCGGATAGCTGATAGAACCTTTAACTTGCATAAGCACCCCTTGTTC
TCGAAAAGCGGATACTTCAGAAGACAACTGAATGAATCAAATGAGGTTGAATTACCAAGA
AATTTCCCTGGAGGAGCAGAGACTTTTGAAATGATGGCACTCTTCATCTATGGATCCTCC
ACGTTAGTCGACCCTTTCAACGTTGCAGCGCTAAGATGTGCAGCAGAGTACCTTGAAATG
ACAGAAGAGTACATATCTGGCAATCTTTGTGAGCGTTTCGACATATATTTGAACCAGGTT
GTGCTGCAAAGCTGGGATGATACTCTGATAGTACTCCAAAAATGCCAAATGTTGCTTCCT
TTGGCTGAGGAGCTGCTGATTGTTAGCCGTTGCATCGAGTCACTTGCCTTCATGGCCTGC
ATGGAAATTCTTGATCCTGAAAGGAGAAGAGACCATCCAGTTGTTACATTAGACGCCTTA
GCTAGTCAGCCTTGGAGTAATGAGACAGTTAAGGCTATTCTCAGCCAAGATTTGTGGATT
AAAGATCTCATCGCTCTGCCATTTCCATTCTTCAAGAGGATAATATCATCTCTGAGAAGA
CAAGGGATGAAGGAAAAATATGTCAGCCCCATAGTTCTTTTCTATGCAAACAAATGGGTA
CTTTCTAGAAAAACTCACCAGTATTGGCAGGACGCTAGGAAGGATGGAAAAGCTGACAAT
GACGTTGAGGATGATGACGATGATGACACTAATGAAAAGGTTTCCAAGATTCTTCAAGGG
ATTCTTGATTTACTCCCTATGGGAGAGAAAGCGAGTAAAGTAATCCCCGTTGGATTTTAT
TTCTCTTTGCTTTCAAGATCACTTCAACTTGGTTTAACAAGTGAAAGTAGGGAAAAGCTG
CAAGATCAGATAGCGTCCCTACTATACTTGGCTCGAATGGAAGATTTCCTCCTTCCGGAT
AGCAGCAATGACTCCATTTCTTCCTGCATTGAGTTATCAGTAATGAAGAGCATAGTTTCA
AAATATGTATCCTTCAACATGGAGTTAACTCATACACCTTCACCAAGAAACTACATCGTC
GCTGAACTTTGGGATGTATATCTAACCAAGATAGCCACCGATCCACAATGGAGTTCGAAA
AGATTCTTAGAGCTCATTGAAACTGTTCCATTGTCCAGCAGGCAAACGCACGATCATCTC
TATAGAGCTTTAAGCACTTTTCTCATGGCACATCCAGATATGTCACAAGAAGAGAAAGGA
TTGGTGTGCAAATACCTCAATTGCCAGAAACTTTCGCAAGAAGTGTGCATTGAAGCAGTT
CAAAATGAATTGATGCCGTTGAGACTTATTGTCCAGGCACTGTTTGTTCAGCAACTAAAC
ACACAGCAAGCTTTTAAAGAATGTTCAGACTCGTTCCGATATGCTCAATGTGGAGAGTAC
TCTGGAAGCCTCTCAAGTACAATATATCCAAATTCCAAAAGCCAGAATCTGGTTGAGAGT
CCATATATGGAGGGAAGTGAAGGAGGAAGCAAAACACTAAGCTTCTTGTTAAAAGATTCA
GCAGTGCAAAGGTCCAAATTCTCAAGGAAGGAATATGAATCCACGAGCTTCAGAATCCAA
AACCTTGAAGAAGAATTGATGTCCTTGAAGAAAACGCTTCAACTGCAGCACATATCTAAG
CAAACAGAAACCATCTCCAAGAAAGTTGAACCAGTTTCAGCAAATTTCCAAAGCTTGAAA
CCATATGGTCTAGAGGGAAGAACACCAAGCAAGAAGAGCGTTGGACAAGTGACTAGTTGC
ATTGGTTCTGTGAATTTTTCTTCCCAAAAACGATATGCTACTAGGTTACTTAAGATTTTC
CGGAGGATAACTTTGTTTGGCAGAGGAAAATCAAGAAAAAAGCAAGGTGGAAATGGCCTT
AGGCCAAAAATATTGAACTTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400010875
PEP Infomation

pacid=37434442 transcript=PGSC0003DMT400015699 locus=PGSC0003DMG400006135 ID=PGSC0003DMT400015699.v4.03 annot-version=v4.03
Sequence

MGTSSSPKDSSILYSPLSSPNVGALLKIKIISWSQETGLPVTIRVRIADRTFNLHKHPLF
SKSGYFRRQLNESNEVELPRNFPGGAETFEMMALFIYGSSTLVDPFNVAALRCAAEYLEM
TEEYISGNLCERFDIYLNQVVLQSWDDTLIVLQKCQMLLPLAEELLIVSRCIESLAFMAC
MEILDPERRRDHPVVTLDALASQPWSNETVKAILSQDLWIKDLIALPFPFFKRIISSLRR
QGMKEKYVSPIVLFYANKWVLSRKTHQYWQDARKDGKADNDVEDDDDDDTNEKVSKILQG
ILDLLPMGEKASKVIPVGFYFSLLSRSLQLGLTSESREKLQDQIASLLYLARMEDFLLPD
SSNDSISSCIELSVMKSIVSKYVSFNMELTHTPSPRNYIVAELWDVYLTKIATDPQWSSK
RFLELIETVPLSSRQTHDHLYRALSTFLMAHPDMSQEEKGLVCKYLNCQKLSQEVCIEAV
QNELMPLRLIVQALFVQQLNTQQAFKECSDSFRYAQCGEYSGSLSSTIYPNSKSQNLVES
PYMEGSEGGSKTLSFLLKDSAVQRSKFSRKEYESTSFRIQNLEEELMSLKKTLQLQHISK
QTETISKKVEPVSANFQSLKPYGLEGRTPSKKSVGQVTSCIGSVNFSSQKRYATRLLKIF
RRITLFGRGKSRKKQGGNGLRPKILNF*

Transcript Sequence

Transcript ID

PGSC0003DMT400015699
Transcript Infomation

pacid=37434442 locus=PGSC0003DMG400006135 ID=PGSC0003DMT400015699.v4.03 annot-version=v4.03
Sequence

ATGGGTACTTCTTCAAGTCCAAAAGACTCTTCAATTCTTTATAGTCCACTTTCATCTCCT
AATGTTGGTGCCTTGCTTAAAATCAAGATCATTTCATGGAGTCAAGAAACTGGTTTACCT
GTCACAATTCGAGTTCGGATAGCTGATAGAACCTTTAACTTGCATAAGCACCCCTTGTTC
TCGAAAAGCGGATACTTCAGAAGACAACTGAATGAATCAAATGAGGTTGAATTACCAAGA
AATTTCCCTGGAGGAGCAGAGACTTTTGAAATGATGGCACTCTTCATCTATGGATCCTCC
ACGTTAGTCGACCCTTTCAACGTTGCAGCGCTAAGATGTGCAGCAGAGTACCTTGAAATG
ACAGAAGAGTACATATCTGGCAATCTTTGTGAGCGTTTCGACATATATTTGAACCAGGTT
GTGCTGCAAAGCTGGGATGATACTCTGATAGTACTCCAAAAATGCCAAATGTTGCTTCCT
TTGGCTGAGGAGCTGCTGATTGTTAGCCGTTGCATCGAGTCACTTGCCTTCATGGCCTGC
ATGGAAATTCTTGATCCTGAAAGGAGAAGAGACCATCCAGTTGTTACATTAGACGCCTTA
GCTAGTCAGCCTTGGAGTAATGAGACAGTTAAGGCTATTCTCAGCCAAGATTTGTGGATT
AAAGATCTCATCGCTCTGCCATTTCCATTCTTCAAGAGGATAATATCATCTCTGAGAAGA
CAAGGGATGAAGGAAAAATATGTCAGCCCCATAGTTCTTTTCTATGCAAACAAATGGGTA
CTTTCTAGAAAAACTCACCAGTATTGGCAGGACGCTAGGAAGGATGGAAAAGCTGACAAT
GACGTTGAGGATGATGACGATGATGACACTAATGAAAAGGTTTCCAAGATTCTTCAAGGG
ATTCTTGATTTACTCCCTATGGGAGAGAAAGCGAGTAAAGTAATCCCCGTTGGATTTTAT
TTCTCTTTGCTTTCAAGATCACTTCAACTTGGTTTAACAAGTGAAAGTAGGGAAAAGCTG
CAAGATCAGATAGCGTCCCTACTATACTTGGCTCGAATGGAAGATTTCCTCCTTCCGGAT
AGCAGCAATGACTCCATTTCTTCCTGCATTGAGTTATCAGTAATGAAGAGCATAGTTTCA
AAATATGTATCCTTCAACATGGAGTTAACTCATACACCTTCACCAAGAAACTACATCGTC
GCTGAACTTTGGGATGTATATCTAACCAAGATAGCCACCGATCCACAATGGAGTTCGAAA
AGATTCTTAGAGCTCATTGAAACTGTTCCATTGTCCAGCAGGCAAACGCACGATCATCTC
TATAGAGCTTTAAGCACTTTTCTCATGGCACATCCAGATATGTCACAAGAAGAGAAAGGA
TTGGTGTGCAAATACCTCAATTGCCAGAAACTTTCGCAAGAAGTGTGCATTGAAGCAGTT
CAAAATGAATTGATGCCGTTGAGACTTATTGTCCAGGCACTGTTTGTTCAGCAACTAAAC
ACACAGCAAGCTTTTAAAGAATGTTCAGACTCGTTCCGATATGCTCAATGTGGAGAGTAC
TCTGGAAGCCTCTCAAGTACAATATATCCAAATTCCAAAAGCCAGAATCTGGTTGAGAGT
CCATATATGGAGGGAAGTGAAGGAGGAAGCAAAACACTAAGCTTCTTGTTAAAAGATTCA
GCAGTGCAAAGGTCCAAATTCTCAAGGAAGGAATATGAATCCACGAGCTTCAGAATCCAA
AACCTTGAAGAAGAATTGATGTCCTTGAAGAAAACGCTTCAACTGCAGCACATATCTAAG
CAAACAGAAACCATCTCCAAGAAAGTTGAACCAGTTTCAGCAAATTTCCAAAGCTTGAAA
CCATATGGTCTAGAGGGAAGAACACCAAGCAAGAAGAGCGTTGGACAAGTGACTAGTTGC
ATTGGTTCTGTGAATTTTTCTTCCCAAAAACGATATGCTACTAGGTTACTTAAGATTTTC
CGGAGGATAACTTTGTTTGGCAGAGGAAAATCAAGAAAAAAGCAAGGTGGAAATGGCCTT
AGGCCAAAAATATTGAACTTTTAA