Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015697
CDS Infomation

pacid=37431804 polypeptide=PGSC0003DMP400010873 locus=PGSC0003DMG400006133 ID=PGSC0003DMT400015697.v4.03 annot-version=v4.03
Sequence

ATGTTGTTATCGCCGGGACACTCCCCGCGCCACCTATCAACGCCGTCTCCTTCGCCGTCG
TTGGCCGAGCAAAACCCTAATTCAACCCTCCACAACAGTAATTCTTCTACAGTACCAACC
AATAAACGCCGGTCGAAAGTACTCGATGAGGATACATATGTGGCCGCTATAGAGAAAATA
ATCGAGCGTGATTTCTTCCCAGATATCCCCAAGCTTCGCGATCGTCTTGATTGGCTTGAA
GCGATTCGCACAGGCGATCCGGTTCAAATTCGTGATGCTCAGTTGAAAATTATCGAACGA
AGGGGAGGTAGAGCTGTTGGATCGAGCACTGAAGGTAAATTACGAACCCCTGGTTCGACT
TTCTTTCGAAATTCGACTACTCCGTTTGATGATCCTTATAAAACTCCCACTCCTAGTGTA
GTTAATGGTAATAATTGGTCTAGTGTTGGGAATAATGCTGAGGGAGGTGGTGGTGAGGTG
GATGGGTCCTTGAGTTTAGATGAGTTTTTTAGGAGGTATACGAGTGAGGATAATGAGAGT
TTTTCAAAGCTTATTGAGAAAGTGAACAGGAAAAGGAAGGAGAAATATGGGTATTTGTTG
GAAGGTGAAAAGGAGGAGGAGATGAAGTTGATTGAGGATTCTAAGAGGGCGAAGGTAGTT
ACTGATGGATATGGGACATCCGATCAGCCTGTGGCTACATTGGAAGGGTGGAAATATGCT
GCTAAGAATTTGCTGATGTATCATCCGGCGGATAATGGGGAAGTAGCCTTGACTGAAGAA
GAAAGAGCTGAGAGGCTTAAGGGATTGACGAAAGAAGTTAGTAAGGTGAATACAAGGTTT
CATGGTAAGATGATGGAATCACAGCCAAAAGAGGATGAAACAGTGGCTGTGCTTTATACA
CCTGTTCCTGGGGCAACTCCGGTTCCTTTTCTTGATAGAGGTGATAAGACAAAGAAGTAT
GATTTGGATGACCTGCGGAAGACCCCGAATCAGTTCTTTGTTGAGTCAGGAAAGAAGGCT
GAGAATGGATATAGTTTTGTTAGTACTCCTTCACCCGTGCCTGGTGTGGATGGATCACCG
TTTATAACGTGGGGAGAAATTGAAGGAACACCTTTGCGGCTGGAGCAGGAGGACACACCC
ATTGATATTGGTGGAAATGGTGAAGGCCCTCAGTATAAGATCCCAATGCCACCCTCCAGA
GATACAAAGGCTCATTCTTTATCTCGTGAAGCTGCTCGTAAGTTGAGGGAGAGGTCAAAG
ATGTTTCAGAAACCACCATTACCTTCACCAGTTAGAGGAGGGAGTGCTAGTCCAGCTGCA
CGTACTCTTTCACCTGCTGCACAGAAGTTTATGCGAAAGGCAATTGCCAAGTCATCTCAC
TCTTTAGATGAATCTCTCCGAGCAAGTTACCGTGGTGCAAGTCCTGGACTGAGCACTCCT
AAAACTGGCAGGAGTTTGTCAAGGTTAGGAAGAGAAGGTAGTCTAGATTCCAGGTCACCA
TCTGTAAGAGAAGGATCTAATCCTCCTTGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400010873
PEP Infomation

pacid=37431804 transcript=PGSC0003DMT400015697 locus=PGSC0003DMG400006133 ID=PGSC0003DMT400015697.v4.03 annot-version=v4.03
Sequence

MLLSPGHSPRHLSTPSPSPSLAEQNPNSTLHNSNSSTVPTNKRRSKVLDEDTYVAAIEKI
IERDFFPDIPKLRDRLDWLEAIRTGDPVQIRDAQLKIIERRGGRAVGSSTEGKLRTPGST
FFRNSTTPFDDPYKTPTPSVVNGNNWSSVGNNAEGGGGEVDGSLSLDEFFRRYTSEDNES
FSKLIEKVNRKRKEKYGYLLEGEKEEEMKLIEDSKRAKVVTDGYGTSDQPVATLEGWKYA
AKNLLMYHPADNGEVALTEEERAERLKGLTKEVSKVNTRFHGKMMESQPKEDETVAVLYT
PVPGATPVPFLDRGDKTKKYDLDDLRKTPNQFFVESGKKAENGYSFVSTPSPVPGVDGSP
FITWGEIEGTPLRLEQEDTPIDIGGNGEGPQYKIPMPPSRDTKAHSLSREAARKLRERSK
MFQKPPLPSPVRGGSASPAARTLSPAAQKFMRKAIAKSSHSLDESLRASYRGASPGLSTP
KTGRSLSRLGREGSLDSRSPSVREGSNPPW*

Transcript Sequence

Transcript ID

PGSC0003DMT400015697
Transcript Infomation

pacid=37431804 locus=PGSC0003DMG400006133 ID=PGSC0003DMT400015697.v4.03 annot-version=v4.03
Sequence

ATGTTGTTATCGCCGGGACACTCCCCGCGCCACCTATCAACGCCGTCTCCTTCGCCGTCG
TTGGCCGAGCAAAACCCTAATTCAACCCTCCACAACAGTAATTCTTCTACAGTACCAACC
AATAAACGCCGGTCGAAAGTACTCGATGAGGATACATATGTGGCCGCTATAGAGAAAATA
ATCGAGCGTGATTTCTTCCCAGATATCCCCAAGCTTCGCGATCGTCTTGATTGGCTTGAA
GCGATTCGCACAGGCGATCCGGTTCAAATTCGTGATGCTCAGTTGAAAATTATCGAACGA
AGGGGAGGTAGAGCTGTTGGATCGAGCACTGAAGGTAAATTACGAACCCCTGGTTCGACT
TTCTTTCGAAATTCGACTACTCCGTTTGATGATCCTTATAAAACTCCCACTCCTAGTGTA
GTTAATGGTAATAATTGGTCTAGTGTTGGGAATAATGCTGAGGGAGGTGGTGGTGAGGTG
GATGGGTCCTTGAGTTTAGATGAGTTTTTTAGGAGGTATACGAGTGAGGATAATGAGAGT
TTTTCAAAGCTTATTGAGAAAGTGAACAGGAAAAGGAAGGAGAAATATGGGTATTTGTTG
GAAGGTGAAAAGGAGGAGGAGATGAAGTTGATTGAGGATTCTAAGAGGGCGAAGGTAGTT
ACTGATGGATATGGGACATCCGATCAGCCTGTGGCTACATTGGAAGGGTGGAAATATGCT
GCTAAGAATTTGCTGATGTATCATCCGGCGGATAATGGGGAAGTAGCCTTGACTGAAGAA
GAAAGAGCTGAGAGGCTTAAGGGATTGACGAAAGAAGTTAGTAAGGTGAATACAAGGTTT
CATGGTAAGATGATGGAATCACAGCCAAAAGAGGATGAAACAGTGGCTGTGCTTTATACA
CCTGTTCCTGGGGCAACTCCGGTTCCTTTTCTTGATAGAGGTGATAAGACAAAGAAGTAT
GATTTGGATGACCTGCGGAAGACCCCGAATCAGTTCTTTGTTGAGTCAGGAAAGAAGGCT
GAGAATGGATATAGTTTTGTTAGTACTCCTTCACCCGTGCCTGGTGTGGATGGATCACCG
TTTATAACGTGGGGAGAAATTGAAGGAACACCTTTGCGGCTGGAGCAGGAGGACACACCC
ATTGATATTGGTGGAAATGGTGAAGGCCCTCAGTATAAGATCCCAATGCCACCCTCCAGA
GATACAAAGGCTCATTCTTTATCTCGTGAAGCTGCTCGTAAGTTGAGGGAGAGGTCAAAG
ATGTTTCAGAAACCACCATTACCTTCACCAGTTAGAGGAGGGAGTGCTAGTCCAGCTGCA
CGTACTCTTTCACCTGCTGCACAGAAGTTTATGCGAAAGGCAATTGCCAAGTCATCTCAC
TCTTTAGATGAATCTCTCCGAGCAAGTTACCGTGGTGCAAGTCCTGGACTGAGCACTCCT
AAAACTGGCAGGAGTTTGTCAAGGTTAGGAAGAGAAGGTAGTCTAGATTCCAGGTCACCA
TCTGTAAGAGAAGGATCTAATCCTCCTTGGTAA