Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015634
CDS Infomation

pacid=37458700 polypeptide=PGSC0003DMP400010832 locus=PGSC0003DMG400006102 ID=PGSC0003DMT400015634.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGTTAGTTCCAATTGGGACTATTTTGGCTGTGATTAGTAGTCAAGTAATGAAA
ACCGCTCAAGCTGCGAATGATGTAGTATTTGAGAAGGAGAGTTTTAAGGTTCTTGGGAAC
TATCTTTTGGACATTGAGCCTGTCTTGAAAGAATTGCAGCTGCAGAAGTTAAACGAGTCC
CCGGCTGCAAGGCAAGCTTTGGAATCCATTGAAGCTGACTTAAAGAAGGCTAATGACTTG
GTTGAGAAGTATAAGAACCGAGCCCGTTTCTACTTGCTGGTCAAATGTAGGAGCATTGTC
AAGGAGGTACAGGAAGTCACTCGGGATATAGGTAAATCCCTGGCCGCGTTATCCCTAGTC
AACATGGAAGTCTTGTCAGGGATTTCAGAAGAGGTAAATAGGCTGCAGAATGAAATGCAA
AGAGCTAACTTTGAGGCATCTCAGTCGCGGCTCCAAATTGTTAACAAGTTAAACCAAGGT
CTATCGGATCAGATACATGACCAAGAATTTGCTAACAATATTCTTAAAGAAATAGCAAGG
GCTGCTGGGGTGCCAGTGGAGCCAGCAGAGATAACGAAAGAGCTAGACAATTTCAAAAAA
GAGAAAGAAGAAGCTGCTTATCGGAAAGAGAGAGCTGAAGTCTTGTTTTTGAACCAAGTC
ATTGAGCTTCTCTCACGAGCCGATGCTGCAAGAAATTATGAGGAAGTCAAAAGCCAATAT
TTCCAGAGAGTTAGCATTATAGAGGGATATGATCCTAGAGAAGAATACATTCAGCCATTT
AAAGCTTTTATTTGTTGTATAACAGGAATTATAATGGTAGATCCTGTAAGCCTATGTACC
GGTACTGCCTGTGAGAGAGCTTCTATCCAAGCTTGGTTTGACTCGGGGGAGAAAATTGAT
CCGGAAACAGGTGAAGAGCTGCAGGATTTGTCGATCAGGCCAAACCTCCAATTGAGACAA
CTAATCCAGGAGTGGAAAGAGCTCAACTATTGCATCATAATCAGGGCTTGCAAGGGGAAA
TTCCTTTCTGGAGTGGATGCATCAATTGAGGAGGCTCTTGCACAAATGCAAGAACTAATG
AAAGCAAATTCGATAAATAAAGAATGGGTGACAATCGGGGGACTCACTGAAGTTGTCATC
TCCAAGCTTGGCATGTTGCGTAACGGATATCTGCAAGATAAAGTGATGATTACGTTAAAG
GACGTCGTAGATGGTCATGCTAGAAACAAGGACGTATTCGTTGAGAACCAGGGGTTTGAG
AATGTTGTAGCATGCTTCGGAAAAAACTATGCCACTTCAACCGCTGCAATTGAGCTGATA
TATGAGGTTCTCCAAGATCAGTCTAGTTGGAACTTGCCTTACTGCCAGAAGCTTTCTCAG
CAGTCCAATTCAATCTTGCTTCTCGTCTCCTTTATAAAAAATCAGGCCAGTCCATCAGCT
GAAAAAGCAGAACAAATCCTGGCTAAGCTTTGTGATGAGGAAGAGGAGAACATTGTTAAG
GTTGCTCGAGAGGGATGGTATGGACCACTTATCGATATGTTACACCATGGATCAGCATCT
TCAAGAATGTCAATTGTTAGAGCAATTCTCGGTTTGGAACTCAGGGATGAAGATATGAAG
CTTCTCGGGGAGAAAGGGGTTATTCTTCCTCTGCTTGAGATGACATCTGGAAATATTGAA
TCAAAAGAACTTTCATTATCTGCACTTGTGAAGCTATCAAGCTTTTATGACAATAAGATG
CTTATAGCTGCGGCTGGAGGGGTTGCTATCGTTTTAAAGCTAATGATTTCATCCCATGTA
CGTTCAATTATCATCGCAAAGTGCTGTGAAGTTCTAGCTAATCTATCTGGCAATGGTGAT
GGAGTTAAGTTCTTGATCGATGAAACTGGAAACCAACTTGTACTAGAGCCTGTAATCGCG
TACTTGCTGGCTTTTCAACAGAATCTTACATCCTCCTCGGACACTGTTCGTAGGCATGCT
TTACGTGCACTATTAGGAATCTGTCAATCTCAAGCTGGACTTGTCAAATCAGCAGTTCTT
TCTGCCGGTGGTGTTTCAGCTGTCCTTCCCCTTCTTGATGATCCGAACCAGGAAATACGA
GAAGCAGCAATCAATCTTCTTTTCCTCTTCTCACAGCACGAGCCAGAGGGTGTCGTTGAG
TATCTTCTTAAGCCAAGAAGATTGGAAACTTTAGTTGGTTTTCTTGAAAATGATAGCAAA
GGTGATGTACAGATGGCTGCAGCCGGTTTACTAGCCAACCTTCCTAAATCGGAAACTTCA
CTCAGAGAGAAACTCATAGAATTAGGTGGCCTAAAGGCAATCATTAACATCTTGAAATCC
GGTACCATGGAAGCTAAGGAAAATGCTCTTAGTGCCTTCTTCAGGTTCACAGATCCAACA
AATCTCCAGTCTCAACGCATCGTGGTTGAGCTTGGAGCATATCCTATACTGGTAAGCTTT
CTCAAAGCTGATTCAATAACTGCACAAGCAAGAGCAGCTGCACTATTAACGGATCTATCA
ATGCGCAGTCATGAACTCAGTGCATTATCCAGGAAAGCTTCTTGTTTCTGTATTGGACGA
GCACGTGCTCCTATCTGTCCTGCCCACGGGGGTGCCTGCAGCGTGAGCAAAACATTCTGT
CTATTGGAGGTAAATGCATTGCCTGATTTGGTTAAACTCTTAAAAGAAAAGATACATGCC
ACGTCTTATGAGGCGATTCAAACACTCTCAACTCTGGTTTGTGAAGAATCGCCTCATAGA
GGAGCCAATGTGCTGCACAAGGAGGATGCAATTTCACCAATCATAGAAGTTTTAAACTGG
GGATCAGAATCTTTAAAAGGAGAAGCTTTAGGGGTCTTGGAAAAAGTGTTTATGTCAAGG
GAAATGGTGGATCTCTATGGACTAACAGCTAAGCTACATCTCGCGCGTTTAACAGGAGGT
AGAATTTATGAAGATGGACATCTCCAAAGGAAAGCTGCTAGAGTCTTGTTACTTATCGAA
CGTCAACCTAGATCATCCAGATCTCTCATTGCAGGAATATCCGGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400010832
PEP Infomation

pacid=37458700 transcript=PGSC0003DMT400015634 locus=PGSC0003DMG400006102 ID=PGSC0003DMT400015634.v4.03 annot-version=v4.03
Sequence

MAELVPIGTILAVISSQVMKTAQAANDVVFEKESFKVLGNYLLDIEPVLKELQLQKLNES
PAARQALESIEADLKKANDLVEKYKNRARFYLLVKCRSIVKEVQEVTRDIGKSLAALSLV
NMEVLSGISEEVNRLQNEMQRANFEASQSRLQIVNKLNQGLSDQIHDQEFANNILKEIAR
AAGVPVEPAEITKELDNFKKEKEEAAYRKERAEVLFLNQVIELLSRADAARNYEEVKSQY
FQRVSIIEGYDPREEYIQPFKAFICCITGIIMVDPVSLCTGTACERASIQAWFDSGEKID
PETGEELQDLSIRPNLQLRQLIQEWKELNYCIIIRACKGKFLSGVDASIEEALAQMQELM
KANSINKEWVTIGGLTEVVISKLGMLRNGYLQDKVMITLKDVVDGHARNKDVFVENQGFE
NVVACFGKNYATSTAAIELIYEVLQDQSSWNLPYCQKLSQQSNSILLLVSFIKNQASPSA
EKAEQILAKLCDEEEENIVKVAREGWYGPLIDMLHHGSASSRMSIVRAILGLELRDEDMK
LLGEKGVILPLLEMTSGNIESKELSLSALVKLSSFYDNKMLIAAAGGVAIVLKLMISSHV
RSIIIAKCCEVLANLSGNGDGVKFLIDETGNQLVLEPVIAYLLAFQQNLTSSSDTVRRHA
LRALLGICQSQAGLVKSAVLSAGGVSAVLPLLDDPNQEIREAAINLLFLFSQHEPEGVVE
YLLKPRRLETLVGFLENDSKGDVQMAAAGLLANLPKSETSLREKLIELGGLKAIINILKS
GTMEAKENALSAFFRFTDPTNLQSQRIVVELGAYPILVSFLKADSITAQARAAALLTDLS
MRSHELSALSRKASCFCIGRARAPICPAHGGACSVSKTFCLLEVNALPDLVKLLKEKIHA
TSYEAIQTLSTLVCEESPHRGANVLHKEDAISPIIEVLNWGSESLKGEALGVLEKVFMSR
EMVDLYGLTAKLHLARLTGGRIYEDGHLQRKAARVLLLIERQPRSSRSLIAGISG*

Transcript Sequence

Transcript ID

PGSC0003DMT400015634
Transcript Infomation

pacid=37458700 locus=PGSC0003DMG400006102 ID=PGSC0003DMT400015634.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGTTAGTTCCAATTGGGACTATTTTGGCTGTGATTAGTAGTCAAGTAATGAAA
ACCGCTCAAGCTGCGAATGATGTAGTATTTGAGAAGGAGAGTTTTAAGGTTCTTGGGAAC
TATCTTTTGGACATTGAGCCTGTCTTGAAAGAATTGCAGCTGCAGAAGTTAAACGAGTCC
CCGGCTGCAAGGCAAGCTTTGGAATCCATTGAAGCTGACTTAAAGAAGGCTAATGACTTG
GTTGAGAAGTATAAGAACCGAGCCCGTTTCTACTTGCTGGTCAAATGTAGGAGCATTGTC
AAGGAGGTACAGGAAGTCACTCGGGATATAGGTAAATCCCTGGCCGCGTTATCCCTAGTC
AACATGGAAGTCTTGTCAGGGATTTCAGAAGAGGTAAATAGGCTGCAGAATGAAATGCAA
AGAGCTAACTTTGAGGCATCTCAGTCGCGGCTCCAAATTGTTAACAAGTTAAACCAAGGT
CTATCGGATCAGATACATGACCAAGAATTTGCTAACAATATTCTTAAAGAAATAGCAAGG
GCTGCTGGGGTGCCAGTGGAGCCAGCAGAGATAACGAAAGAGCTAGACAATTTCAAAAAA
GAGAAAGAAGAAGCTGCTTATCGGAAAGAGAGAGCTGAAGTCTTGTTTTTGAACCAAGTC
ATTGAGCTTCTCTCACGAGCCGATGCTGCAAGAAATTATGAGGAAGTCAAAAGCCAATAT
TTCCAGAGAGTTAGCATTATAGAGGGATATGATCCTAGAGAAGAATACATTCAGCCATTT
AAAGCTTTTATTTGTTGTATAACAGGAATTATAATGGTAGATCCTGTAAGCCTATGTACC
GGTACTGCCTGTGAGAGAGCTTCTATCCAAGCTTGGTTTGACTCGGGGGAGAAAATTGAT
CCGGAAACAGGTGAAGAGCTGCAGGATTTGTCGATCAGGCCAAACCTCCAATTGAGACAA
CTAATCCAGGAGTGGAAAGAGCTCAACTATTGCATCATAATCAGGGCTTGCAAGGGGAAA
TTCCTTTCTGGAGTGGATGCATCAATTGAGGAGGCTCTTGCACAAATGCAAGAACTAATG
AAAGCAAATTCGATAAATAAAGAATGGGTGACAATCGGGGGACTCACTGAAGTTGTCATC
TCCAAGCTTGGCATGTTGCGTAACGGATATCTGCAAGATAAAGTGATGATTACGTTAAAG
GACGTCGTAGATGGTCATGCTAGAAACAAGGACGTATTCGTTGAGAACCAGGGGTTTGAG
AATGTTGTAGCATGCTTCGGAAAAAACTATGCCACTTCAACCGCTGCAATTGAGCTGATA
TATGAGGTTCTCCAAGATCAGTCTAGTTGGAACTTGCCTTACTGCCAGAAGCTTTCTCAG
CAGTCCAATTCAATCTTGCTTCTCGTCTCCTTTATAAAAAATCAGGCCAGTCCATCAGCT
GAAAAAGCAGAACAAATCCTGGCTAAGCTTTGTGATGAGGAAGAGGAGAACATTGTTAAG
GTTGCTCGAGAGGGATGGTATGGACCACTTATCGATATGTTACACCATGGATCAGCATCT
TCAAGAATGTCAATTGTTAGAGCAATTCTCGGTTTGGAACTCAGGGATGAAGATATGAAG
CTTCTCGGGGAGAAAGGGGTTATTCTTCCTCTGCTTGAGATGACATCTGGAAATATTGAA
TCAAAAGAACTTTCATTATCTGCACTTGTGAAGCTATCAAGCTTTTATGACAATAAGATG
CTTATAGCTGCGGCTGGAGGGGTTGCTATCGTTTTAAAGCTAATGATTTCATCCCATGTA
CGTTCAATTATCATCGCAAAGTGCTGTGAAGTTCTAGCTAATCTATCTGGCAATGGTGAT
GGAGTTAAGTTCTTGATCGATGAAACTGGAAACCAACTTGTACTAGAGCCTGTAATCGCG
TACTTGCTGGCTTTTCAACAGAATCTTACATCCTCCTCGGACACTGTTCGTAGGCATGCT
TTACGTGCACTATTAGGAATCTGTCAATCTCAAGCTGGACTTGTCAAATCAGCAGTTCTT
TCTGCCGGTGGTGTTTCAGCTGTCCTTCCCCTTCTTGATGATCCGAACCAGGAAATACGA
GAAGCAGCAATCAATCTTCTTTTCCTCTTCTCACAGCACGAGCCAGAGGGTGTCGTTGAG
TATCTTCTTAAGCCAAGAAGATTGGAAACTTTAGTTGGTTTTCTTGAAAATGATAGCAAA
GGTGATGTACAGATGGCTGCAGCCGGTTTACTAGCCAACCTTCCTAAATCGGAAACTTCA
CTCAGAGAGAAACTCATAGAATTAGGTGGCCTAAAGGCAATCATTAACATCTTGAAATCC
GGTACCATGGAAGCTAAGGAAAATGCTCTTAGTGCCTTCTTCAGGTTCACAGATCCAACA
AATCTCCAGTCTCAACGCATCGTGGTTGAGCTTGGAGCATATCCTATACTGGTAAGCTTT
CTCAAAGCTGATTCAATAACTGCACAAGCAAGAGCAGCTGCACTATTAACGGATCTATCA
ATGCGCAGTCATGAACTCAGTGCATTATCCAGGAAAGCTTCTTGTTTCTGTATTGGACGA
GCACGTGCTCCTATCTGTCCTGCCCACGGGGGTGCCTGCAGCGTGAGCAAAACATTCTGT
CTATTGGAGGTAAATGCATTGCCTGATTTGGTTAAACTCTTAAAAGAAAAGATACATGCC
ACGTCTTATGAGGCGATTCAAACACTCTCAACTCTGGTTTGTGAAGAATCGCCTCATAGA
GGAGCCAATGTGCTGCACAAGGAGGATGCAATTTCACCAATCATAGAAGTTTTAAACTGG
GGATCAGAATCTTTAAAAGGAGAAGCTTTAGGGGTCTTGGAAAAAGTGTTTATGTCAAGG
GAAATGGTGGATCTCTATGGACTAACAGCTAAGCTACATCTCGCGCGTTTAACAGGAGGT
AGAATTTATGAAGATGGACATCTCCAAAGGAAAGCTGCTAGAGTCTTGTTACTTATCGAA
CGTCAACCTAGATCATCCAGATCTCTCATTGCAGGAATATCCGGTTAA