Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015598
CDS Infomation

pacid=37456995 polypeptide=PGSC0003DMP400010804 locus=PGSC0003DMG400006090 ID=PGSC0003DMT400015598.v4.03 annot-version=v4.03
Sequence

ATGGAATCCAGAGGCGATGAAGTCATCCCTCGACACCCAAAACGGAGCAAACCCACAAAT
CCTGCCCATTTTTCGTCCATTTTAAGCCAAGATTCAGTCTTGCCAATGCCTAACCTTCCT
ACAGAACTCATCCTAGAAATCTTGTTAAAGCTTCCGGTGAAATCCCTATTGCAATTTAGA
TCTGTTTCGAAATCTTGGCTTTCCTTAATCTCTAACCCTGAATTTGTGAAGGCTCATCTC
TCTTTATCCGCTAGTAACAAGAACTACACCCACCATGGAGTTATGGTTAAGGTTTCTACT
AAATCTGTCTTCGTTGTTAAGGATTGTTCTCTTAGGTCTTTGCTTTACCATCCTGTAACG
GAGGCATTTGACTTGGATTATCCCGGTAAAAGTCCCAATCATTATCTTTGGTTTGTGGGT
GTTGTCAATGGATTGATTTGTTTTTCCATCCGTCTATTTGACGGATTGTACGACTTGTTT
CTATGGAATCCATCAATTAGAAAGTATAAGAAATTGCCTAATTTTAGACTTGATGTAAGT
CGCCGTTACTATTTGGATGGACATGTTAATTTCAAATTTGGTTTTGCATACAATGAGTTG
CAAGATGATTACAAGGTAGTGGGTATTTTTCCTATTTATACAAGGGGACACTTGAGTCGT
GTTGAGGTCAAAATATATAGTCTTAAGAGGGATTCTTGGAGATGCATTGATGATTTTCGA
CGTCAAGAGCGCTTGGCTGGTTCTGCTAAGTTTGTCAATGAGAAACTTCATTGGCTTGAC
AAGCAATGGAACATCATTTCTATTGATTTGGCTGATGAGAAATGGGCAGAGCTAGAGCGA
CCATCCTGTTTTAAACAATATGTATTTTTGAAGCTAGGAGTGTTAGGGGGTGATCTTTCT
GCATCTTTTATTTATGCATCGAGTCATGCAGATGTCTGGGTTATGAAGGAATATGGGGTA
AAAGAATCTTGGACTAAGATATTTACCACCAAGTCTCCTGGTTATCCTATGGCACATCCA
TTGCATCCAACCATTTTAACGTCAAATGAAGGTGAACTTTTGTGTCTGTTTGGAGGTCGC
TTGATGAAATACAATACAAAGGATAACATGATCAGCTATCTAGATGTTACCAACTTTGGT
CCATGTCTTGAGGCAGAAATCTATGTTGAGAGCCTAATTTGTCCCTTTTCACAGCAGGGA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400010804
PEP Infomation

pacid=37456995 transcript=PGSC0003DMT400015598 locus=PGSC0003DMG400006090 ID=PGSC0003DMT400015598.v4.03 annot-version=v4.03
Sequence

MESRGDEVIPRHPKRSKPTNPAHFSSILSQDSVLPMPNLPTELILEILLKLPVKSLLQFR
SVSKSWLSLISNPEFVKAHLSLSASNKNYTHHGVMVKVSTKSVFVVKDCSLRSLLYHPVT
EAFDLDYPGKSPNHYLWFVGVVNGLICFSIRLFDGLYDLFLWNPSIRKYKKLPNFRLDVS
RRYYLDGHVNFKFGFAYNELQDDYKVVGIFPIYTRGHLSRVEVKIYSLKRDSWRCIDDFR
RQERLAGSAKFVNEKLHWLDKQWNIISIDLADEKWAELERPSCFKQYVFLKLGVLGGDLS
ASFIYASSHADVWVMKEYGVKESWTKIFTTKSPGYPMAHPLHPTILTSNEGELLCLFGGR
LMKYNTKDNMISYLDVTNFGPCLEAEIYVESLICPFSQQG*

Transcript Sequence

Transcript ID

PGSC0003DMT400015598
Transcript Infomation

pacid=37456995 locus=PGSC0003DMG400006090 ID=PGSC0003DMT400015598.v4.03 annot-version=v4.03
Sequence

ATGGAATCCAGAGGCGATGAAGTCATCCCTCGACACCCAAAACGGAGCAAACCCACAAAT
CCTGCCCATTTTTCGTCCATTTTAAGCCAAGATTCAGTCTTGCCAATGCCTAACCTTCCT
ACAGAACTCATCCTAGAAATCTTGTTAAAGCTTCCGGTGAAATCCCTATTGCAATTTAGA
TCTGTTTCGAAATCTTGGCTTTCCTTAATCTCTAACCCTGAATTTGTGAAGGCTCATCTC
TCTTTATCCGCTAGTAACAAGAACTACACCCACCATGGAGTTATGGTTAAGGTTTCTACT
AAATCTGTCTTCGTTGTTAAGGATTGTTCTCTTAGGTCTTTGCTTTACCATCCTGTAACG
GAGGCATTTGACTTGGATTATCCCGGTAAAAGTCCCAATCATTATCTTTGGTTTGTGGGT
GTTGTCAATGGATTGATTTGTTTTTCCATCCGTCTATTTGACGGATTGTACGACTTGTTT
CTATGGAATCCATCAATTAGAAAGTATAAGAAATTGCCTAATTTTAGACTTGATGTAAGT
CGCCGTTACTATTTGGATGGACATGTTAATTTCAAATTTGGTTTTGCATACAATGAGTTG
CAAGATGATTACAAGGTAGTGGGTATTTTTCCTATTTATACAAGGGGACACTTGAGTCGT
GTTGAGGTCAAAATATATAGTCTTAAGAGGGATTCTTGGAGATGCATTGATGATTTTCGA
CGTCAAGAGCGCTTGGCTGGTTCTGCTAAGTTTGTCAATGAGAAACTTCATTGGCTTGAC
AAGCAATGGAACATCATTTCTATTGATTTGGCTGATGAGAAATGGGCAGAGCTAGAGCGA
CCATCCTGTTTTAAACAATATGTATTTTTGAAGCTAGGAGTGTTAGGGGGTGATCTTTCT
GCATCTTTTATTTATGCATCGAGTCATGCAGATGTCTGGGTTATGAAGGAATATGGGGTA
AAAGAATCTTGGACTAAGATATTTACCACCAAGTCTCCTGGTTATCCTATGGCACATCCA
TTGCATCCAACCATTTTAACGTCAAATGAAGGTGAACTTTTGTGTCTGTTTGGAGGTCGC
TTGATGAAATACAATACAAAGGATAACATGATCAGCTATCTAGATGTTACCAACTTTGGT
CCATGTCTTGAGGCAGAAATCTATGTTGAGAGCCTAATTTGTCCCTTTTCACAGCAGGGA
TAA