Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015596
CDS Infomation

pacid=37456640 polypeptide=PGSC0003DMP400010802 locus=PGSC0003DMG400006089 ID=PGSC0003DMT400015596.v4.03 annot-version=v4.03
Sequence

ATGGCAGCAAACCAACCGGAAGCCTACGCCGATGATTTCCTCGAGCAAATTCTCGCTATT
CCTTCCTATGGCTTGCCGGTTGCTGATGTTGGCACTCCATCAGAGACGACGTCGTTTACC
TCGGCGTCTGCCGTATCTCATCTTAACTCTGCCGCTGCTGCTGGCCTACAGCAACCTATG
TTCCCGTTGGGATTGAGCTTGGATAACGGCCGTGATGACGTCAGCGAAGCTGGTGCTTAT
GCAGTGAAGCATGAAAGAGATGGAATGAATATCGGAAATTTATATGTAGGTCTAGAACAC
TTGCAATCTCATGCAGTTCGTCACTCTCTGCCTTCTGTTCACCATGTCCAGCCTTTTCAA
GGCCCACCAACAACGAGCACAACAGTAACTGTACCGCAGCCACCTTCAATTCGTCCTAGG
GTTCGAGCTCGGAGGGGACAAGCCACAGATCCACATAGCATTGCTGAGAGGCTGAGAAGA
GAGAGGATATCTGAAAGAATAAAGGCTTTGCAGGAACTGGTACCCAGCTGCAATAAGACA
GATAGGGCAGCAATGCTTGATGAGATTCTGGACTATGTGAAGTTCTTAAGGCTTCAAGTT
AAGGTACTGAGCATGAGTAGGCTGGGAGGAGCCAGTGCAGTGGCACAACTTGTTGCTGAC
ATTCCATTGCAATCTGTGGAGGGGGACAGTGGTGAAAGTAGATCCAACCAGCATATATGG
GATAAATGGTCCAATGTAGACACAGAACAAGAGGTTGCTAAGCTCATGGAGGAAGACGTC
GGTGCAGCCATGCAATACCTTCAGTCTAAATCACTCTGCATCATGCCCATATCACTTGCT
GCACTCATCTATCCTACTCAGCAACCGGATGACCAGTCACTGGTCAAGCCTGAAGCGGCA
GCCCCATCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400010802
PEP Infomation

pacid=37456640 transcript=PGSC0003DMT400015596 locus=PGSC0003DMG400006089 ID=PGSC0003DMT400015596.v4.03 annot-version=v4.03
Sequence

MAANQPEAYADDFLEQILAIPSYGLPVADVGTPSETTSFTSASAVSHLNSAAAAGLQQPM
FPLGLSLDNGRDDVSEAGAYAVKHERDGMNIGNLYVGLEHLQSHAVRHSLPSVHHVQPFQ
GPPTTSTTVTVPQPPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKT
DRAAMLDEILDYVKFLRLQVKVLSMSRLGGASAVAQLVADIPLQSVEGDSGESRSNQHIW
DKWSNVDTEQEVAKLMEEDVGAAMQYLQSKSLCIMPISLAALIYPTQQPDDQSLVKPEAA
APS*

Transcript Sequence

Transcript ID

PGSC0003DMT400015596
Transcript Infomation

pacid=37456640 locus=PGSC0003DMG400006089 ID=PGSC0003DMT400015596.v4.03 annot-version=v4.03
Sequence

ATGGCAGCAAACCAACCGGAAGCCTACGCCGATGATTTCCTCGAGCAAATTCTCGCTATT
CCTTCCTATGGCTTGCCGGTTGCTGATGTTGGCACTCCATCAGAGACGACGTCGTTTACC
TCGGCGTCTGCCGTATCTCATCTTAACTCTGCCGCTGCTGCTGGCCTACAGCAACCTATG
TTCCCGTTGGGATTGAGCTTGGATAACGGCCGTGATGACGTCAGCGAAGCTGGTGCTTAT
GCAGTGAAGCATGAAAGAGATGGAATGAATATCGGAAATTTATATGTAGGTCTAGAACAC
TTGCAATCTCATGCAGTTCGTCACTCTCTGCCTTCTGTTCACCATGTCCAGCCTTTTCAA
GGCCCACCAACAACGAGCACAACAGTAACTGTACCGCAGCCACCTTCAATTCGTCCTAGG
GTTCGAGCTCGGAGGGGACAAGCCACAGATCCACATAGCATTGCTGAGAGGCTGAGAAGA
GAGAGGATATCTGAAAGAATAAAGGCTTTGCAGGAACTGGTACCCAGCTGCAATAAGACA
GATAGGGCAGCAATGCTTGATGAGATTCTGGACTATGTGAAGTTCTTAAGGCTTCAAGTT
AAGGTACTGAGCATGAGTAGGCTGGGAGGAGCCAGTGCAGTGGCACAACTTGTTGCTGAC
ATTCCATTGCAATCTGTGGAGGGGGACAGTGGTGAAAGTAGATCCAACCAGCATATATGG
GATAAATGGTCCAATGTAGACACAGAACAAGAGGTTGCTAAGCTCATGGAGGAAGACGTC
GGTGCAGCCATGCAATACCTTCAGTCTAAATCACTCTGCATCATGCCCATATCACTTGCT
GCACTCATCTATCCTACTCAGCAACCGGATGACCAGTCACTGGTCAAGCCTGAAGCGGCA
GCCCCATCATAG