Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015593
CDS Infomation

pacid=37456336 polypeptide=PGSC0003DMP400010801 locus=PGSC0003DMG400006088 ID=PGSC0003DMT400015593.v4.03 annot-version=v4.03
Sequence

ATGATAACAAGACCAATATTTGTTTTTTCACTTCTCTTATTCTTATCATTCATATTCAAC
CAAAACATAATATGTTATGCACAAGAGCCACCAAGCATCACAGGATATACTTGTAATCCT
AACCAATTCAATCCATGTCAAACTTATGTGTTATACAGAGCTAGAGGACCAGACTTTCTT
GATTTAGCCTCAATTGGTGATCTTTTTTCAGTAAGTAGACTAATGATAGCAAACCCTAGT
AATATTTCCAACCCAAACACAACTCTTGTTAATGATCAACCCCTTTTTATCCCCATCACA
TGTTCTTGTAACAACATCAACACAACATATGGTAGCATATCTTATGCTGGCTTTAACTAC
ACTTTCAAATCAGGTGACACTATGTATGGTATATCAACATCTAAATACCAAAATCTTACT
ACTTATCAATCTGTTGAGGCTGTTAATCCCACAGTTGTAGCAACCAACATTGATGTAGGC
CAGACCATAAAATTCCCAATTTTTTGCAAGTGTCCAAACACGACACAAAATCAACCAAGA
CTACTCATAAGTTATGTTTTTCAACCTAATGATAACATTTCTTCTGTCGCCTCAAGATTC
AGGGTAACCCCACAATCTATAACACAAATTAATGGAAATAACACCAAGATTCTTGATACC
CTTTTCATCCCTCTTTCTAATCTACCTAATCTTACACAGCCAGCATCTTCAAACACCCCA
CCCCCACCCCCAGCACCAGCACCAGTAATTCAAGAAAATGACAGAAAAGAGACTGTCATA
GGGTTAGCAATTGGTTTAGGGGTTTGTGGGTTGCTGTTGATTTTGATTCTTGGTTTGTTT
TACAAGGAGAAAACAGTAAAGAAAGAAAAGTATGGTGATGTAGAAAGGCAAAAAAGTTTG
TATCTTGGATCAAAAAAGAAGTCTTTTGTTGATAAAGATGTTGAAGTGAATTTGTTGGCT
GATTTATCAGAGTGTTTGGATAAGTATAAAATGTATAAAATGGTACAACTTTGGGAAGCA
ACAAATGGATTTGATGAAGGGTGTTTGATTCAAGGGTCTGTGTTTAAAGGAACAATTGAT
GAAGAAGTGTTTGCAATCAAAAAAATGAAATGGAATGCCCGCGAAGAACTCAAAATCCTG
CAAAAGGTGAACCATGGGAATTTGGTGAAGCTAGAAGGTTTTTGCATAGACCCTAAAGAA
GCAAATTGCTTCTTAGTCTATGAGTATGTTGAAAATGGTTCACTACATTCATGGATTCAT
GGTGAAAAACCTGAAAAATTGAGTTGGAAAACAAGACTAAGAATTGCAACTGATGTTGCA
AATGGTCTTTTATACATTCATGAACATACAAGGCCAAGAGTTGTCCACAAAGACATCAAA
ACTAGCAACATTCTCCTAGACACCAACATGAGAGCCAAAGTTGCCAATTTTGGTCTAGCT
AAATCAGGTTGCAATGCCATAACAATGCACATTGTAGGTACTCAGGGGTACATCTCCCCT
GAGTACCTAACCGATGGCATTGTATCCACTAAGATGGATGTTTTCTCATTTGGAGTTGTG
TTGCTCGAGCTAGTGTCAGGGAAGGAGGCTATTGATGATGAAGGGAAAGTCTTGTGGGCA
AAAATTAGCGATTTTTCGGAAGGGAGTGAAGAGAGGAAGGTGAGGAAATTGCAAGAATGG
ATGGATGATAGTCTTTTGAGGGAAGAGTTAACAATGGAGAGTGTTGTGAATGTGATGTCT
GTGGCTATTTCTTGTTTGAATAAAGATCCATCAAGAAGGCCAGGGATGATTGAAATTGTG
TATGCATTGTCTAAAAGTATTGATCTATTTACTGATGTCTCAGAGGAAGGACTATCTCCA
AGGCAAGTCACAGCAAGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400010801
PEP Infomation

pacid=37456336 transcript=PGSC0003DMT400015593 locus=PGSC0003DMG400006088 ID=PGSC0003DMT400015593.v4.03 annot-version=v4.03
Sequence

MITRPIFVFSLLLFLSFIFNQNIICYAQEPPSITGYTCNPNQFNPCQTYVLYRARGPDFL
DLASIGDLFSVSRLMIANPSNISNPNTTLVNDQPLFIPITCSCNNINTTYGSISYAGFNY
TFKSGDTMYGISTSKYQNLTTYQSVEAVNPTVVATNIDVGQTIKFPIFCKCPNTTQNQPR
LLISYVFQPNDNISSVASRFRVTPQSITQINGNNTKILDTLFIPLSNLPNLTQPASSNTP
PPPPAPAPVIQENDRKETVIGLAIGLGVCGLLLILILGLFYKEKTVKKEKYGDVERQKSL
YLGSKKKSFVDKDVEVNLLADLSECLDKYKMYKMVQLWEATNGFDEGCLIQGSVFKGTID
EEVFAIKKMKWNAREELKILQKVNHGNLVKLEGFCIDPKEANCFLVYEYVENGSLHSWIH
GEKPEKLSWKTRLRIATDVANGLLYIHEHTRPRVVHKDIKTSNILLDTNMRAKVANFGLA
KSGCNAITMHIVGTQGYISPEYLTDGIVSTKMDVFSFGVVLLELVSGKEAIDDEGKVLWA
KISDFSEGSEERKVRKLQEWMDDSLLREELTMESVVNVMSVAISCLNKDPSRRPGMIEIV
YALSKSIDLFTDVSEEGLSPRQVTAR*

Transcript Sequence

Transcript ID

PGSC0003DMT400015593
Transcript Infomation

pacid=37456336 locus=PGSC0003DMG400006088 ID=PGSC0003DMT400015593.v4.03 annot-version=v4.03
Sequence

ATGATAACAAGACCAATATTTGTTTTTTCACTTCTCTTATTCTTATCATTCATATTCAAC
CAAAACATAATATGTTATGCACAAGAGCCACCAAGCATCACAGGATATACTTGTAATCCT
AACCAATTCAATCCATGTCAAACTTATGTGTTATACAGAGCTAGAGGACCAGACTTTCTT
GATTTAGCCTCAATTGGTGATCTTTTTTCAGTAAGTAGACTAATGATAGCAAACCCTAGT
AATATTTCCAACCCAAACACAACTCTTGTTAATGATCAACCCCTTTTTATCCCCATCACA
TGTTCTTGTAACAACATCAACACAACATATGGTAGCATATCTTATGCTGGCTTTAACTAC
ACTTTCAAATCAGGTGACACTATGTATGGTATATCAACATCTAAATACCAAAATCTTACT
ACTTATCAATCTGTTGAGGCTGTTAATCCCACAGTTGTAGCAACCAACATTGATGTAGGC
CAGACCATAAAATTCCCAATTTTTTGCAAGTGTCCAAACACGACACAAAATCAACCAAGA
CTACTCATAAGTTATGTTTTTCAACCTAATGATAACATTTCTTCTGTCGCCTCAAGATTC
AGGGTAACCCCACAATCTATAACACAAATTAATGGAAATAACACCAAGATTCTTGATACC
CTTTTCATCCCTCTTTCTAATCTACCTAATCTTACACAGCCAGCATCTTCAAACACCCCA
CCCCCACCCCCAGCACCAGCACCAGTAATTCAAGAAAATGACAGAAAAGAGACTGTCATA
GGGTTAGCAATTGGTTTAGGGGTTTGTGGGTTGCTGTTGATTTTGATTCTTGGTTTGTTT
TACAAGGAGAAAACAGTAAAGAAAGAAAAGTATGGTGATGTAGAAAGGCAAAAAAGTTTG
TATCTTGGATCAAAAAAGAAGTCTTTTGTTGATAAAGATGTTGAAGTGAATTTGTTGGCT
GATTTATCAGAGTGTTTGGATAAGTATAAAATGTATAAAATGGTACAACTTTGGGAAGCA
ACAAATGGATTTGATGAAGGGTGTTTGATTCAAGGGTCTGTGTTTAAAGGAACAATTGAT
GAAGAAGTGTTTGCAATCAAAAAAATGAAATGGAATGCCCGCGAAGAACTCAAAATCCTG
CAAAAGGTGAACCATGGGAATTTGGTGAAGCTAGAAGGTTTTTGCATAGACCCTAAAGAA
GCAAATTGCTTCTTAGTCTATGAGTATGTTGAAAATGGTTCACTACATTCATGGATTCAT
GGTGAAAAACCTGAAAAATTGAGTTGGAAAACAAGACTAAGAATTGCAACTGATGTTGCA
AATGGTCTTTTATACATTCATGAACATACAAGGCCAAGAGTTGTCCACAAAGACATCAAA
ACTAGCAACATTCTCCTAGACACCAACATGAGAGCCAAAGTTGCCAATTTTGGTCTAGCT
AAATCAGGTTGCAATGCCATAACAATGCACATTGTAGGTACTCAGGGGTACATCTCCCCT
GAGTACCTAACCGATGGCATTGTATCCACTAAGATGGATGTTTTCTCATTTGGAGTTGTG
TTGCTCGAGCTAGTGTCAGGGAAGGAGGCTATTGATGATGAAGGGAAAGTCTTGTGGGCA
AAAATTAGCGATTTTTCGGAAGGGAGTGAAGAGAGGAAGGTGAGGAAATTGCAAGAATGG
ATGGATGATAGTCTTTTGAGGGAAGAGTTAACAATGGAGAGTGTTGTGAATGTGATGTCT
GTGGCTATTTCTTGTTTGAATAAAGATCCATCAAGAAGGCCAGGGATGATTGAAATTGTG
TATGCATTGTCTAAAAGTATTGATCTATTTACTGATGTCTCAGAGGAAGGACTATCTCCA
AGGCAAGTCACAGCAAGATAG