Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015590
CDS Infomation

pacid=37454869 polypeptide=PGSC0003DMP400010798 locus=PGSC0003DMG400006086 ID=PGSC0003DMT400015590.v4.03 annot-version=v4.03
Sequence

ATGATAACAAAAACAATATTTGGTTTTTCACTTCTTCTCTTCTTATCATTCATATTCAAC
CAAAACATATGTTATGCACAAGATCCACCAAGCATAACAGGATATACTTGTAATCCCAAC
CAATTCAATCCATGTCAAACTTATGTGTTATACAGAGCTAGAGGACCAGAGTTTCTTGAT
TTAGCCACAATAGGTGATCTTTTTTCAGTAAGTAGGGTAATGATTGCAAACCCAAGTAAT
ATTTCCAACCCAAACACAACTCTTGTTAATGATCAATCCCTTTTTATCCCCATCACATGT
TCTTGCAATAACATCAACACAACTTTTGGTAGCATATCTTATGCTGGCTTAAACTACAAT
TTCAAAGAAGGTGACACTATGTATGAAATGTCAATATCCAAATACCAAAATCTTACTACT
TATCAATCTGTTGAGGCTGTTAATCCCACAGTTGTAGCAACCAACATTGATGTAGGCCAG
ACCATAAAATTCCCAATTTTTTGCAAGTGTCCAAACACGACACAAAATCAACCAAGACTA
CTCATAAGTTATGTTTTTCAACCTAATGATAACATTTCTTCTATCGCATCAAGATTCGGG
ATAACCCCACAATCCATAACACAAATTAATGGAAATAATACCAAGATTCTTGATACCCTT
TTCATCCCTCTTTCTAATCTACCTAATCTTACACAGCCAGCATCTTCAAACACCCCACCC
CCACCCCCAGCACCAGCACCAGTAATTCAAGAAAATGACAGAAAAGAGACTGTCATAGGG
TTAGCAATTGGTTTAGGGGTTTGTGGGTTGCTGTTGATTTTGATTCTTGGTTTGTTTTAC
AAGGAGAAAACAGTAAAGAAAGAAAAGTATGGTGATGTAGAAAGGCAAAAAAGTTTGTAT
CTTGGATCAAAAAAGAAGTCTTTTGTTGATAAAGATGTTGAAGTGAATTTGTTGGCTGAT
TTATCAGAGTGTTTGGATAAGTATAAAATGTATAAAATGGTACAACTTTGGGAAGCAACA
AATGGATTTGATGAAGGGTGTTTGATTCAAGGGTCTGTGTTTAAAGGAACAATTGATGAA
GAAGTGTTTGCAATCAAAAAAATGAAATGGAATGCCCGCGAAGAACTCAAAATCCTGCAA
AAGGTGAACCATGGGAATTTGGTGAAGCTAGAGGGTTTTTGCATAGACCCTAAAGAAGCA
AATTGCTACTTAGTCTATGAGTATGTTGAAAATGGTTCACTACATTCTTGGCTTCACGGT
GAAAAACCTGAAAAATTGAGCTGGAAAACAAGACTAAGGATTGCCACTGATGTTGCAAAT
GGTCTCTTATACATTCATGAACATACAAGGCCAAGAGTTGTCCACAAAGACATCAAGAGT
AGCAACATTCTCCTAGACTCCAACATGAGAGCCAAAGTTGCCAATTTTGGTCTAGCTAAA
TCAGGGTGCAATGCTATAACAATGCACATTGTAGGTACTCAGGGGTACATCTCCCCTGAG
TACCTCACTGATGGGGTTGTATCCACTAAAATGGATGTTTTCTCATTCGGGGTTGTGTTG
CTCGAGCTTGTGTCAGGGAAGGAGGCTATCGATGATGAAGGGAAAGTCTTGTGGGCAAAA
ATTAGCGATTTTTCTGAAGGGAGTGAAGAGAGGAAGGTGAGGAAATTGCAAGAATGGATG
GATGAAAGTCTATTGAGGGAAGAATTAACAATGGAAAGTGTTGTGAATGTGATGACTGTG
GCTATTTCATGTTTGAATAAAGATCCTTCAAGAAGGCCAGGGATGATTGAAATTGTGTAT
GCCTTATCTAAAAGTATTGATCTATTTTCTGATGTTTCAGAGGAAGGACCATCTCCAAGG
CAAGTCACAGCAAGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400010798
PEP Infomation

pacid=37454869 transcript=PGSC0003DMT400015590 locus=PGSC0003DMG400006086 ID=PGSC0003DMT400015590.v4.03 annot-version=v4.03
Sequence

MITKTIFGFSLLLFLSFIFNQNICYAQDPPSITGYTCNPNQFNPCQTYVLYRARGPEFLD
LATIGDLFSVSRVMIANPSNISNPNTTLVNDQSLFIPITCSCNNINTTFGSISYAGLNYN
FKEGDTMYEMSISKYQNLTTYQSVEAVNPTVVATNIDVGQTIKFPIFCKCPNTTQNQPRL
LISYVFQPNDNISSIASRFGITPQSITQINGNNTKILDTLFIPLSNLPNLTQPASSNTPP
PPPAPAPVIQENDRKETVIGLAIGLGVCGLLLILILGLFYKEKTVKKEKYGDVERQKSLY
LGSKKKSFVDKDVEVNLLADLSECLDKYKMYKMVQLWEATNGFDEGCLIQGSVFKGTIDE
EVFAIKKMKWNAREELKILQKVNHGNLVKLEGFCIDPKEANCYLVYEYVENGSLHSWLHG
EKPEKLSWKTRLRIATDVANGLLYIHEHTRPRVVHKDIKSSNILLDSNMRAKVANFGLAK
SGCNAITMHIVGTQGYISPEYLTDGVVSTKMDVFSFGVVLLELVSGKEAIDDEGKVLWAK
ISDFSEGSEERKVRKLQEWMDESLLREELTMESVVNVMTVAISCLNKDPSRRPGMIEIVY
ALSKSIDLFSDVSEEGPSPRQVTAR*

Transcript Sequence

Transcript ID

PGSC0003DMT400015590
Transcript Infomation

pacid=37454869 locus=PGSC0003DMG400006086 ID=PGSC0003DMT400015590.v4.03 annot-version=v4.03
Sequence

ATGATAACAAAAACAATATTTGGTTTTTCACTTCTTCTCTTCTTATCATTCATATTCAAC
CAAAACATATGTTATGCACAAGATCCACCAAGCATAACAGGATATACTTGTAATCCCAAC
CAATTCAATCCATGTCAAACTTATGTGTTATACAGAGCTAGAGGACCAGAGTTTCTTGAT
TTAGCCACAATAGGTGATCTTTTTTCAGTAAGTAGGGTAATGATTGCAAACCCAAGTAAT
ATTTCCAACCCAAACACAACTCTTGTTAATGATCAATCCCTTTTTATCCCCATCACATGT
TCTTGCAATAACATCAACACAACTTTTGGTAGCATATCTTATGCTGGCTTAAACTACAAT
TTCAAAGAAGGTGACACTATGTATGAAATGTCAATATCCAAATACCAAAATCTTACTACT
TATCAATCTGTTGAGGCTGTTAATCCCACAGTTGTAGCAACCAACATTGATGTAGGCCAG
ACCATAAAATTCCCAATTTTTTGCAAGTGTCCAAACACGACACAAAATCAACCAAGACTA
CTCATAAGTTATGTTTTTCAACCTAATGATAACATTTCTTCTATCGCATCAAGATTCGGG
ATAACCCCACAATCCATAACACAAATTAATGGAAATAATACCAAGATTCTTGATACCCTT
TTCATCCCTCTTTCTAATCTACCTAATCTTACACAGCCAGCATCTTCAAACACCCCACCC
CCACCCCCAGCACCAGCACCAGTAATTCAAGAAAATGACAGAAAAGAGACTGTCATAGGG
TTAGCAATTGGTTTAGGGGTTTGTGGGTTGCTGTTGATTTTGATTCTTGGTTTGTTTTAC
AAGGAGAAAACAGTAAAGAAAGAAAAGTATGGTGATGTAGAAAGGCAAAAAAGTTTGTAT
CTTGGATCAAAAAAGAAGTCTTTTGTTGATAAAGATGTTGAAGTGAATTTGTTGGCTGAT
TTATCAGAGTGTTTGGATAAGTATAAAATGTATAAAATGGTACAACTTTGGGAAGCAACA
AATGGATTTGATGAAGGGTGTTTGATTCAAGGGTCTGTGTTTAAAGGAACAATTGATGAA
GAAGTGTTTGCAATCAAAAAAATGAAATGGAATGCCCGCGAAGAACTCAAAATCCTGCAA
AAGGTGAACCATGGGAATTTGGTGAAGCTAGAGGGTTTTTGCATAGACCCTAAAGAAGCA
AATTGCTACTTAGTCTATGAGTATGTTGAAAATGGTTCACTACATTCTTGGCTTCACGGT
GAAAAACCTGAAAAATTGAGCTGGAAAACAAGACTAAGGATTGCCACTGATGTTGCAAAT
GGTCTCTTATACATTCATGAACATACAAGGCCAAGAGTTGTCCACAAAGACATCAAGAGT
AGCAACATTCTCCTAGACTCCAACATGAGAGCCAAAGTTGCCAATTTTGGTCTAGCTAAA
TCAGGGTGCAATGCTATAACAATGCACATTGTAGGTACTCAGGGGTACATCTCCCCTGAG
TACCTCACTGATGGGGTTGTATCCACTAAAATGGATGTTTTCTCATTCGGGGTTGTGTTG
CTCGAGCTTGTGTCAGGGAAGGAGGCTATCGATGATGAAGGGAAAGTCTTGTGGGCAAAA
ATTAGCGATTTTTCTGAAGGGAGTGAAGAGAGGAAGGTGAGGAAATTGCAAGAATGGATG
GATGAAAGTCTATTGAGGGAAGAATTAACAATGGAAAGTGTTGTGAATGTGATGACTGTG
GCTATTTCATGTTTGAATAAAGATCCTTCAAGAAGGCCAGGGATGATTGAAATTGTGTAT
GCCTTATCTAAAAGTATTGATCTATTTTCTGATGTTTCAGAGGAAGGACCATCTCCAAGG
CAAGTCACAGCAAGATAG