Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015578
CDS Infomation

pacid=37456424 polypeptide=PGSC0003DMP400010789 locus=PGSC0003DMG401006082 ID=PGSC0003DMT400015578.v4.03 annot-version=v4.03
Sequence

ATGCAGAAAAGAGAGCAATCGAAGCTAAGCGGGTCATCGGGTGGCTCCGTCGGACCGCCG
GCGAAAAGAGGTCGGCCATTTGGAAGCGGAAATAGCAACGCCGCTGCTGCAGCCGCTGCT
GCAGCAGCTGATTCAGCAGCTCCGTCAACACTCCTTGGCCCTTCCCTGCAAGTTCACTCC
GCCTTCGCTGAACAGAATAATAAAAGAATTGTTCTAGCTCTTCAAAGTGGATTAAAGAGG
GAGCTGACATGGGCATTAAATATCCTCACTCTGCTATCATTCAAGGAGAAAGACGAAGTC
CGCAGGGATGCGACTCCTCTCGCCAAAATTCCTGGATTGCTTGATGCTCTGCTTCAAATT
ATAGATGATTGGCGTGATATAGCCTTACCAAGGGTACTTGTAAAGGCACCGCGTGTCCGG
CTTTTGGGTGCAAATTCAGTCGTTACTGGATTTGGACTTGAATATGAAGCATTGAACTCG
AATGAATCTGTTCTCAATCCTAGAGAGTCATCTGTTCAGAAGAGTTCTACCAAGTCTCGC
CCCACGGGTTTGTGGTTTGAGGAAGATGGCCTATTTAATTTGGATGAGGAGGGGCGGATT
GAAAAACAGCAGTTTGCTGTTGCTGCTTCAAACGTTGTTCGCAACTTCTCTTTTATGCCA
GATAATGAAGTCATCATGGGCCAGCATAGACATTGCTTAGAAACTCTATTCCAATGTCTG
GCAGATTATGTCACAGAGGATGAAGAACTTGTCACAAATGCTCTCGAGACTATAGTGAAT
ATAGGTCCATTGATAGATCTTCGGATTTTCAGTTCCTCAAAACCTTCTTTTATCAAAATG
ACGGAGAAACGTGCAGTACAGGCCGTCATGGGAGTGCTAGGATCTGCTGTTAAGGCCTGG
CATTGTGCTGCCGCTGAATTAATTGGTCGTCTTATAATAAATCCTGATAATGAACCTTTC
TTACTTGCTTCTGCAACACAGATTAATAAACGTTTAGTTGATATCATGAGCCAACCGGCC
ATTGATGCTCAAGCAGCTGCTATTGGTGCATTATATAACCTTTCAGAAATAAATATGGAC
TGCCGTTTGAAGCTTGCTAGTGAACGATGGGCTATTGATAGACTGTTGAAGGTCATTAAG
ATGCCACATCCTGTGCCAGAAGTGTGCAGGAAAGCAGCAACGATTTTGGAAAACCTTGTT
TCAGAGCCACAGAACAAGCCCTTCCTGCTAGTGCATGAAAATGCATTTGCGGAGATGCTT
TTTGGTGACCCAAGATACTCAGACATATTTTCCAGGATACTGTACGAACTGACATCACGG
CCAAGCAACAAAATGGCATCAGCTCGAGGGATCTGGGGCATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400010789
PEP Infomation

pacid=37456424 transcript=PGSC0003DMT400015578 locus=PGSC0003DMG401006082 ID=PGSC0003DMT400015578.v4.03 annot-version=v4.03
Sequence

MQKREQSKLSGSSGGSVGPPAKRGRPFGSGNSNAAAAAAAAAADSAAPSTLLGPSLQVHS
AFAEQNNKRIVLALQSGLKRELTWALNILTLLSFKEKDEVRRDATPLAKIPGLLDALLQI
IDDWRDIALPRVLVKAPRVRLLGANSVVTGFGLEYEALNSNESVLNPRESSVQKSSTKSR
PTGLWFEEDGLFNLDEEGRIEKQQFAVAASNVVRNFSFMPDNEVIMGQHRHCLETLFQCL
ADYVTEDEELVTNALETIVNIGPLIDLRIFSSSKPSFIKMTEKRAVQAVMGVLGSAVKAW
HCAAAELIGRLIINPDNEPFLLASATQINKRLVDIMSQPAIDAQAAAIGALYNLSEINMD
CRLKLASERWAIDRLLKVIKMPHPVPEVCRKAATILENLVSEPQNKPFLLVHENAFAEML
FGDPRYSDIFSRILYELTSRPSNKMASARGIWGM*

Transcript Sequence

Transcript ID

PGSC0003DMT400015578
Transcript Infomation

pacid=37456424 locus=PGSC0003DMG401006082 ID=PGSC0003DMT400015578.v4.03 annot-version=v4.03
Sequence

ATGCAGAAAAGAGAGCAATCGAAGCTAAGCGGGTCATCGGGTGGCTCCGTCGGACCGCCG
GCGAAAAGAGGTCGGCCATTTGGAAGCGGAAATAGCAACGCCGCTGCTGCAGCCGCTGCT
GCAGCAGCTGATTCAGCAGCTCCGTCAACACTCCTTGGCCCTTCCCTGCAAGTTCACTCC
GCCTTCGCTGAACAGAATAATAAAAGAATTGTTCTAGCTCTTCAAAGTGGATTAAAGAGG
GAGCTGACATGGGCATTAAATATCCTCACTCTGCTATCATTCAAGGAGAAAGACGAAGTC
CGCAGGGATGCGACTCCTCTCGCCAAAATTCCTGGATTGCTTGATGCTCTGCTTCAAATT
ATAGATGATTGGCGTGATATAGCCTTACCAAGGGTACTTGTAAAGGCACCGCGTGTCCGG
CTTTTGGGTGCAAATTCAGTCGTTACTGGATTTGGACTTGAATATGAAGCATTGAACTCG
AATGAATCTGTTCTCAATCCTAGAGAGTCATCTGTTCAGAAGAGTTCTACCAAGTCTCGC
CCCACGGGTTTGTGGTTTGAGGAAGATGGCCTATTTAATTTGGATGAGGAGGGGCGGATT
GAAAAACAGCAGTTTGCTGTTGCTGCTTCAAACGTTGTTCGCAACTTCTCTTTTATGCCA
GATAATGAAGTCATCATGGGCCAGCATAGACATTGCTTAGAAACTCTATTCCAATGTCTG
GCAGATTATGTCACAGAGGATGAAGAACTTGTCACAAATGCTCTCGAGACTATAGTGAAT
ATAGGTCCATTGATAGATCTTCGGATTTTCAGTTCCTCAAAACCTTCTTTTATCAAAATG
ACGGAGAAACGTGCAGTACAGGCCGTCATGGGAGTGCTAGGATCTGCTGTTAAGGCCTGG
CATTGTGCTGCCGCTGAATTAATTGGTCGTCTTATAATAAATCCTGATAATGAACCTTTC
TTACTTGCTTCTGCAACACAGATTAATAAACGTTTAGTTGATATCATGAGCCAACCGGCC
ATTGATGCTCAAGCAGCTGCTATTGGTGCATTATATAACCTTTCAGAAATAAATATGGAC
TGCCGTTTGAAGCTTGCTAGTGAACGATGGGCTATTGATAGACTGTTGAAGGTCATTAAG
ATGCCACATCCTGTGCCAGAAGTGTGCAGGAAAGCAGCAACGATTTTGGAAAACCTTGTT
TCAGAGCCACAGAACAAGCCCTTCCTGCTAGTGCATGAAAATGCATTTGCGGAGATGCTT
TTTGGTGACCCAAGATACTCAGACATATTTTCCAGGATACTGTACGAACTGACATCACGG
CCAAGCAACAAAATGGCATCAGCTCGAGGGATCTGGGGCATGTAA