Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015484
CDS Infomation

pacid=37466847 polypeptide=PGSC0003DMP400010730 locus=PGSC0003DMG400006048 ID=PGSC0003DMT400015484.v4.03 annot-version=v4.03
Sequence

ATGATATCCACACACTACTTTATCTTCTTCTTCTTCTTCCTTTTCAGCTTTGTTTCATCC
CATGATACCAGCATAATATTCACCACCTTAGGAAGATCAACTTATGCCTTCGACATCTTC
GCTCTTCCAACAACACACCCACAAACCGAATTCCAGTTGACCGATGGCAATTCCGTTAAC
TTTAACGGTAATTTCCCGGCCTCCCTACCGCCTTCCCTGCTCTCCCGCCTACCCGATGAT
GATTCTGTCAATTCCGGGAAGCTGCCGTTTCATCTTATCTACGTGACGGAAAGGAACGGC
ACCCACCATGTATTTTACGACGCTGTGTTTCATGGGGTTGGTGAAAGAAGAGCCATACTT
GAGTTTCCACCTCAAACTGAGTCGACTCGAGTTCAGGTTCCTTTGGTGGGTTTTGAGCAA
TCGGGTGGGAGGGTTTCTATGAAAGATAAACCTAGTTTAACTGGGGAATTTTTGATATAC
GTATCGACTCATGAGGATTCCGGTGTGCCGAGGACGAGCTGGGCTGCGGTATATTCGACT
CATTTGGGTTCCGGGTTGACCCGGAGGTTGACACCTAAAGGGGTTGCTGATTTCAGCCCG
GCAGTGTCTCCTTCCGGCGTTTGGACGGCGGTGGCATCGTATGGGGAGAAGGGTTGGAGT
GGGGAGGTCGAGGAACTCGCTACGGATATCTATGTGTTCATGACTCGTGATGGGTCGGGT
CGGGTTAAGGTGGTGGAGCACGGTGGCTGGCCGACATGGGCTGATGAGTATACTCTGTAT
TTCCACCGGAGGTGCGATGATGGGTGGTGGAGTGTGTTCAAAGCTGTACTTCCGAAATCA
GATATCGACTCAGTCTCTACCCAGCGAGTCACCCCACCGGGTTTGCACGTGTTCACACCA
GCATCTTCTCCGGCGAACAAGAATGTCATCGCCGTCGCTACCAGAAGAGCAGGTTCAGAG
TATCGGCACATCGAGCTATTCGACGTCGTTTCTAAGAAATTTACAGAAATAACGAAACCT
GTTTCACCTCATGCTCATCATCTGAACCCGTTCTTTTCGCCGGATTCTTCATGGGTTGGA
TACCATAAATGTCGAGGCTCAGGCAATGGAAGAGGGAGCGATACACTGTTACTGGAAAAT
CTTCGAAACCCGATACCCGGAATCTCTCTATTCCGGATTGACGGGTCGTTTCCATCATTT
TCACCAAATGGTGATCGGATAGCTTATGTGAGGTTACCTGGATTATATGTGGTGAACTAC
GACGGATCAGGTCTGCGTAAAATTTCATCAAGAACAGCCTTTTCCACAGCTTGGGACCCG
AAAAGAAAGGGAGTAATTTACACTAGCTTTGGACCAACATTTGCTAGTGAAAGTACAGAA
GTGGATATCATTTCCATCAATGTAGATGATGAAGACCTGAGCTACAAACAAATGACAATA
GGAGGGAAGAATAACGCGTTTCCGTCCCCTTCACCTGATGGAAAATGGATCGTCTTCCGA
TCAGGGAGATCAGGTCACAAGAACTTGTACATTATGGATGCTTTGGAAGGAGAGGCGGGT
GGTCTACGTAGATTGACAGAGGGGCCATGGACGGATACCATGTGTAATTGGTCACCGGAT
GGTGAATGGATCGCATTTGCATCCGATCGAGAAAACCCCGGGTCAGGTAGTTTCGAGATG
TATATGATTCACCCTAATGGAACAGGACTCAAGAAGGTGATCCAGAGTGGTATGGGTGGG
AGGACTAACCACCCCTATTTCAGCCCGGATGGGAAGTATATAGTTTTCACTTCAGATTAC
GCGGCTGTATCAGCTGAGCCCATCTCGAACCCTCATCATTATCAGCCATATGGTGATATA
TATGTGATCAAATCAGACGGCTCGGACATCCGAAGATTAACACACAATTCGTACGAGGAT
GGTACGCCTGCTTGGGGCCCTACTTTCATAAAACCTGTGGATGTAGAATGGCCTAACGGT
GGACATCCCTGTTCCTTTGAAGATTGTCACTGGCTGAATGTTAGGCCTAATGCCAGTGTA
ATGGATGCATCCTTTGGCTTAGGTTCTGCCAAGATTGAGTGTGCTCAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400010730
PEP Infomation

pacid=37466847 transcript=PGSC0003DMT400015484 locus=PGSC0003DMG400006048 ID=PGSC0003DMT400015484.v4.03 annot-version=v4.03
Sequence

MISTHYFIFFFFFLFSFVSSHDTSIIFTTLGRSTYAFDIFALPTTHPQTEFQLTDGNSVN
FNGNFPASLPPSLLSRLPDDDSVNSGKLPFHLIYVTERNGTHHVFYDAVFHGVGERRAIL
EFPPQTESTRVQVPLVGFEQSGGRVSMKDKPSLTGEFLIYVSTHEDSGVPRTSWAAVYST
HLGSGLTRRLTPKGVADFSPAVSPSGVWTAVASYGEKGWSGEVEELATDIYVFMTRDGSG
RVKVVEHGGWPTWADEYTLYFHRRCDDGWWSVFKAVLPKSDIDSVSTQRVTPPGLHVFTP
ASSPANKNVIAVATRRAGSEYRHIELFDVVSKKFTEITKPVSPHAHHLNPFFSPDSSWVG
YHKCRGSGNGRGSDTLLLENLRNPIPGISLFRIDGSFPSFSPNGDRIAYVRLPGLYVVNY
DGSGLRKISSRTAFSTAWDPKRKGVIYTSFGPTFASESTEVDIISINVDDEDLSYKQMTI
GGKNNAFPSPSPDGKWIVFRSGRSGHKNLYIMDALEGEAGGLRRLTEGPWTDTMCNWSPD
GEWIAFASDRENPGSGSFEMYMIHPNGTGLKKVIQSGMGGRTNHPYFSPDGKYIVFTSDY
AAVSAEPISNPHHYQPYGDIYVIKSDGSDIRRLTHNSYEDGTPAWGPTFIKPVDVEWPNG
GHPCSFEDCHWLNVRPNASVMDASFGLGSAKIECAQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400015484
Transcript Infomation

pacid=37466847 locus=PGSC0003DMG400006048 ID=PGSC0003DMT400015484.v4.03 annot-version=v4.03
Sequence

ATGATATCCACACACTACTTTATCTTCTTCTTCTTCTTCCTTTTCAGCTTTGTTTCATCC
CATGATACCAGCATAATATTCACCACCTTAGGAAGATCAACTTATGCCTTCGACATCTTC
GCTCTTCCAACAACACACCCACAAACCGAATTCCAGTTGACCGATGGCAATTCCGTTAAC
TTTAACGGTAATTTCCCGGCCTCCCTACCGCCTTCCCTGCTCTCCCGCCTACCCGATGAT
GATTCTGTCAATTCCGGGAAGCTGCCGTTTCATCTTATCTACGTGACGGAAAGGAACGGC
ACCCACCATGTATTTTACGACGCTGTGTTTCATGGGGTTGGTGAAAGAAGAGCCATACTT
GAGTTTCCACCTCAAACTGAGTCGACTCGAGTTCAGGTTCCTTTGGTGGGTTTTGAGCAA
TCGGGTGGGAGGGTTTCTATGAAAGATAAACCTAGTTTAACTGGGGAATTTTTGATATAC
GTATCGACTCATGAGGATTCCGGTGTGCCGAGGACGAGCTGGGCTGCGGTATATTCGACT
CATTTGGGTTCCGGGTTGACCCGGAGGTTGACACCTAAAGGGGTTGCTGATTTCAGCCCG
GCAGTGTCTCCTTCCGGCGTTTGGACGGCGGTGGCATCGTATGGGGAGAAGGGTTGGAGT
GGGGAGGTCGAGGAACTCGCTACGGATATCTATGTGTTCATGACTCGTGATGGGTCGGGT
CGGGTTAAGGTGGTGGAGCACGGTGGCTGGCCGACATGGGCTGATGAGTATACTCTGTAT
TTCCACCGGAGGTGCGATGATGGGTGGTGGAGTGTGTTCAAAGCTGTACTTCCGAAATCA
GATATCGACTCAGTCTCTACCCAGCGAGTCACCCCACCGGGTTTGCACGTGTTCACACCA
GCATCTTCTCCGGCGAACAAGAATGTCATCGCCGTCGCTACCAGAAGAGCAGGTTCAGAG
TATCGGCACATCGAGCTATTCGACGTCGTTTCTAAGAAATTTACAGAAATAACGAAACCT
GTTTCACCTCATGCTCATCATCTGAACCCGTTCTTTTCGCCGGATTCTTCATGGGTTGGA
TACCATAAATGTCGAGGCTCAGGCAATGGAAGAGGGAGCGATACACTGTTACTGGAAAAT
CTTCGAAACCCGATACCCGGAATCTCTCTATTCCGGATTGACGGGTCGTTTCCATCATTT
TCACCAAATGGTGATCGGATAGCTTATGTGAGGTTACCTGGATTATATGTGGTGAACTAC
GACGGATCAGGTCTGCGTAAAATTTCATCAAGAACAGCCTTTTCCACAGCTTGGGACCCG
AAAAGAAAGGGAGTAATTTACACTAGCTTTGGACCAACATTTGCTAGTGAAAGTACAGAA
GTGGATATCATTTCCATCAATGTAGATGATGAAGACCTGAGCTACAAACAAATGACAATA
GGAGGGAAGAATAACGCGTTTCCGTCCCCTTCACCTGATGGAAAATGGATCGTCTTCCGA
TCAGGGAGATCAGGTCACAAGAACTTGTACATTATGGATGCTTTGGAAGGAGAGGCGGGT
GGTCTACGTAGATTGACAGAGGGGCCATGGACGGATACCATGTGTAATTGGTCACCGGAT
GGTGAATGGATCGCATTTGCATCCGATCGAGAAAACCCCGGGTCAGGTAGTTTCGAGATG
TATATGATTCACCCTAATGGAACAGGACTCAAGAAGGTGATCCAGAGTGGTATGGGTGGG
AGGACTAACCACCCCTATTTCAGCCCGGATGGGAAGTATATAGTTTTCACTTCAGATTAC
GCGGCTGTATCAGCTGAGCCCATCTCGAACCCTCATCATTATCAGCCATATGGTGATATA
TATGTGATCAAATCAGACGGCTCGGACATCCGAAGATTAACACACAATTCGTACGAGGAT
GGTACGCCTGCTTGGGGCCCTACTTTCATAAAACCTGTGGATGTAGAATGGCCTAACGGT
GGACATCCCTGTTCCTTTGAAGATTGTCACTGGCTGAATGTTAGGCCTAATGCCAGTGTA
ATGGATGCATCCTTTGGCTTAGGTTCTGCCAAGATTGAGTGTGCTCAATGA