Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015438
CDS Infomation

pacid=37466109 polypeptide=PGSC0003DMP400010699 locus=PGSC0003DMG400006026 ID=PGSC0003DMT400015438.v4.03 annot-version=v4.03
Sequence

ATGTGGAGACAAGCGGTTCTGAGTAGAGTTGTAGCAAGGAAAAACTTTCATGGCCTCCAA
AACCGTGCCTTTGTTACTTTTCTTCCTCAAGTATCCAGAGATCAAACTTTAGCTCCAGTG
AGTTCATTTGCATCTTCATTTCGTTATTATTCTCATTGGGTTTCTTCCACATCTTGTTTA
CGTGAAACAACAAGACTTTTTTCATCAAACCCATCTGAACAATCTGAATCTCTAGGTTCT
GAACCCTTTGAAAATGATAAAGACTCTGTTTTTGGAGGAGTTGTTGAAGGGTCCTCTGTT
TTTGATGGAATTGAGGATACCCTTGCAGTTGAAAATGGGTCTGATTTAGGAGATAATGAG
GTTGTAGTGGAAGATGAGGAAGAAGCTGAGGATTTAGATTTGGAGAAATTGGAGAGTGTG
TTGTCTCTATTGCAGAGTAGTGGTAATATTGATGGATCTGTCGAGTCTAGTCTTGAGGAA
ATTGGGTTGTCTTTGAATGAGGAGTTGGTTGTTAGAGTGCTCGAGACGCCCTATGTTCCT
GGGGAGAATTTGATTTCGTTTTTCAAGTGGGTCTTGAAGAAACCTGAGTTTGTAGTGACG
AGTAGGGCGGTTGAATTGTTGGTTACTGCAATCTGCATTCGAGGTAGGAATGTCTATGCT
TTATGGGATATGGTGAAGGAGATTGGAGAAAAGAACAAGGGGATATTGAGTGGTGAGATT
CTTAATGAATTGATTGCTTTATTGTCAAGATTAGGTAAGGGAAAGGCTGCATTTGAGATC
TTTAATAAGTTTGGGGATTTAGGATGTGCACCAAATGCTGATACATACTATTTCACCATT
GAAGCACTTTCTAGGCGTTCGATTTATGATTGGGCTTCTACTGTTTGTGAGAAGATGCTT
AATGCTGATATGTTGCCTGGTGCTGAGAAAGTTGGAAAGATTGTTTCTTTTCTGTGTAAA
GGAAATAAGTCTAGAGATGCACATCTGGTTTATTTGTCGGCAAAGGAGAAAAATATTAAT
CTGCCTGTATCTTCTATTAAGTTATTGATCAGCTCTCTTTGTCGCAAAGATGAAGGCGTT
AACCTTGCAATGGAGATGTTGGATGAGTTCCCCAAAGAAGAGCGGAAGCATGCCATTAAG
TCATTCTCACATGTCATCAATGGGTTGTGTAGGGCAAATGATGTAACAGGGGAAAAGCAG
CTGCGTTCCTATTGCAGTGAAGACATTGAAGAGGCCAAAAACTTGCTCTTAAAAATGATA
GATGCAGGTCCACCGCCTGGCAATGCAGTCTTCAATACAGTTATTAATGCACTCTCCAAG
AAGGGAGAAATGGGAGAAGCTAGGAAACTATTGAAGGTGATGGAGGGTAGAGGTTTGAAA
CCTGATGTGTACACTTATAGTGTAATTATGAGTGGTTATACAAAGGGAGGTGAGATGGAG
GAGGCCTGCAAGATTTTGAATGAAGCCAAAAAGAAGCACTCCAATCTAAGTCCTGTCACT
TATCACACAATTATTCGGGGCTATTGCAAGCTCGAACAGTATGACAAGGCTCTGGAACTA
TTGGGAGAGATGAAGGAGTATGGAGTTCAGCCTAATGCGGATGAATATAACAAATTTATT
CAATCTCTCTGCCTTAAGGCTTTAGATTGGACAACAGCAGAGAAGCTGCTTGAGGAGATG
AAGGAGAATGGGGTGCATCTAAATGCAATCACAAAGGGTCTCGTAAGAGCTGTTAAGGAG
TTAGAACAGGAAGAAGTAGGAACAAATGAAATAACGGCTACAGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400010699
PEP Infomation

pacid=37466109 transcript=PGSC0003DMT400015438 locus=PGSC0003DMG400006026 ID=PGSC0003DMT400015438.v4.03 annot-version=v4.03
Sequence

MWRQAVLSRVVARKNFHGLQNRAFVTFLPQVSRDQTLAPVSSFASSFRYYSHWVSSTSCL
RETTRLFSSNPSEQSESLGSEPFENDKDSVFGGVVEGSSVFDGIEDTLAVENGSDLGDNE
VVVEDEEEAEDLDLEKLESVLSLLQSSGNIDGSVESSLEEIGLSLNEELVVRVLETPYVP
GENLISFFKWVLKKPEFVVTSRAVELLVTAICIRGRNVYALWDMVKEIGEKNKGILSGEI
LNELIALLSRLGKGKAAFEIFNKFGDLGCAPNADTYYFTIEALSRRSIYDWASTVCEKML
NADMLPGAEKVGKIVSFLCKGNKSRDAHLVYLSAKEKNINLPVSSIKLLISSLCRKDEGV
NLAMEMLDEFPKEERKHAIKSFSHVINGLCRANDVTGEKQLRSYCSEDIEEAKNLLLKMI
DAGPPPGNAVFNTVINALSKKGEMGEARKLLKVMEGRGLKPDVYTYSVIMSGYTKGGEME
EACKILNEAKKKHSNLSPVTYHTIIRGYCKLEQYDKALELLGEMKEYGVQPNADEYNKFI
QSLCLKALDWTTAEKLLEEMKENGVHLNAITKGLVRAVKELEQEEVGTNEITATA*

Transcript Sequence

Transcript ID

PGSC0003DMT400015438
Transcript Infomation

pacid=37466109 locus=PGSC0003DMG400006026 ID=PGSC0003DMT400015438.v4.03 annot-version=v4.03
Sequence

ATGTGGAGACAAGCGGTTCTGAGTAGAGTTGTAGCAAGGAAAAACTTTCATGGCCTCCAA
AACCGTGCCTTTGTTACTTTTCTTCCTCAAGTATCCAGAGATCAAACTTTAGCTCCAGTG
AGTTCATTTGCATCTTCATTTCGTTATTATTCTCATTGGGTTTCTTCCACATCTTGTTTA
CGTGAAACAACAAGACTTTTTTCATCAAACCCATCTGAACAATCTGAATCTCTAGGTTCT
GAACCCTTTGAAAATGATAAAGACTCTGTTTTTGGAGGAGTTGTTGAAGGGTCCTCTGTT
TTTGATGGAATTGAGGATACCCTTGCAGTTGAAAATGGGTCTGATTTAGGAGATAATGAG
GTTGTAGTGGAAGATGAGGAAGAAGCTGAGGATTTAGATTTGGAGAAATTGGAGAGTGTG
TTGTCTCTATTGCAGAGTAGTGGTAATATTGATGGATCTGTCGAGTCTAGTCTTGAGGAA
ATTGGGTTGTCTTTGAATGAGGAGTTGGTTGTTAGAGTGCTCGAGACGCCCTATGTTCCT
GGGGAGAATTTGATTTCGTTTTTCAAGTGGGTCTTGAAGAAACCTGAGTTTGTAGTGACG
AGTAGGGCGGTTGAATTGTTGGTTACTGCAATCTGCATTCGAGGTAGGAATGTCTATGCT
TTATGGGATATGGTGAAGGAGATTGGAGAAAAGAACAAGGGGATATTGAGTGGTGAGATT
CTTAATGAATTGATTGCTTTATTGTCAAGATTAGGTAAGGGAAAGGCTGCATTTGAGATC
TTTAATAAGTTTGGGGATTTAGGATGTGCACCAAATGCTGATACATACTATTTCACCATT
GAAGCACTTTCTAGGCGTTCGATTTATGATTGGGCTTCTACTGTTTGTGAGAAGATGCTT
AATGCTGATATGTTGCCTGGTGCTGAGAAAGTTGGAAAGATTGTTTCTTTTCTGTGTAAA
GGAAATAAGTCTAGAGATGCACATCTGGTTTATTTGTCGGCAAAGGAGAAAAATATTAAT
CTGCCTGTATCTTCTATTAAGTTATTGATCAGCTCTCTTTGTCGCAAAGATGAAGGCGTT
AACCTTGCAATGGAGATGTTGGATGAGTTCCCCAAAGAAGAGCGGAAGCATGCCATTAAG
TCATTCTCACATGTCATCAATGGGTTGTGTAGGGCAAATGATGTAACAGGGGAAAAGCAG
CTGCGTTCCTATTGCAGTGAAGACATTGAAGAGGCCAAAAACTTGCTCTTAAAAATGATA
GATGCAGGTCCACCGCCTGGCAATGCAGTCTTCAATACAGTTATTAATGCACTCTCCAAG
AAGGGAGAAATGGGAGAAGCTAGGAAACTATTGAAGGTGATGGAGGGTAGAGGTTTGAAA
CCTGATGTGTACACTTATAGTGTAATTATGAGTGGTTATACAAAGGGAGGTGAGATGGAG
GAGGCCTGCAAGATTTTGAATGAAGCCAAAAAGAAGCACTCCAATCTAAGTCCTGTCACT
TATCACACAATTATTCGGGGCTATTGCAAGCTCGAACAGTATGACAAGGCTCTGGAACTA
TTGGGAGAGATGAAGGAGTATGGAGTTCAGCCTAATGCGGATGAATATAACAAATTTATT
CAATCTCTCTGCCTTAAGGCTTTAGATTGGACAACAGCAGAGAAGCTGCTTGAGGAGATG
AAGGAGAATGGGGTGCATCTAAATGCAATCACAAAGGGTCTCGTAAGAGCTGTTAAGGAG
TTAGAACAGGAAGAAGTAGGAACAAATGAAATAACGGCTACAGCATAG