Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015435
CDS Infomation

pacid=37465489 polypeptide=PGSC0003DMP400010696 locus=PGSC0003DMG400006025 ID=PGSC0003DMT400015435.v4.03 annot-version=v4.03
Sequence

ATGGCTATTCCAGTAATTGATTTTTCAAAGCTTAATGGAGAGGAAAGAGCCAACACTTTA
GCTCAAATTGCCACTTCTTGTGAAGAATGGGGATTTTTTCAGTTGGTGAATCATGGGATT
CCTGTGGAACTTCTTGAGAAGGTGAAGAGAGTTTCTTCAGAAAGTTTTAAGAAGGAAAGA
GAAGATAATTTCAACAAATCAACAGCAATAAACTTGTTGAATGAAGTGGAGAAAAATAAA
AGCAATAATAACAAAGTTGAAAATGTAGATTGGGAAGATGTATTCCTTCTTACTGATGAT
AATGAATGGCCCTCCAATATTCCTCAATTCAGGGAAATAATGAAAGAGTATCGATCAGAA
TTGAAGAATCTAGCAAAACAAGTGATGGAAATAATGGACGAAAACTTAGGTCTACCAAAA
GGTTACATCAATAAATCTTTTAATAACGGCGAAGAAGGTTCCGAAAATGCGTTTTTCGGG
ACTAAAGTCAGTCATTATCCACCATGCCCAAATCCCGAAATGGTGAATGGTCTACGCGCA
CACACCGATGCTGGTGGTGTAATTTTGCTTTTTCAGGATGATCAGGTGGACGGTCTTCAA
ATCCTCAAGGATGGTGAATGGATCGATGTTCAGCCGATCCAGAATGCCATCGTTATCAAC
ACGGGTGACCAAATTGAAGTCCTTAGTAACGGGAAATACAAGAGTGTTTGGCATCGCGTT
TTGGCTAAGGAAAATGGGAATAGAAGGTCAATTGCGTCTTTTTATAATCCGTCTTTAAAA
GCTACGATTGCTCCTGCACCTCAACTAATTCATATTGATAATGATAATAATAATGATAAT
AATAAGGTGGAACTAATTAGTAATTATCCAGCTTTTAAGTTTGGTGATTATATGAATGTT
TATAGTGAACAAAAATTTTCACCTAAAGAGCCAAGATTCCAAGCTGTTAGAGCCATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400010696
PEP Infomation

pacid=37465489 transcript=PGSC0003DMT400015435 locus=PGSC0003DMG400006025 ID=PGSC0003DMT400015435.v4.03 annot-version=v4.03
Sequence

MAIPVIDFSKLNGEERANTLAQIATSCEEWGFFQLVNHGIPVELLEKVKRVSSESFKKER
EDNFNKSTAINLLNEVEKNKSNNNKVENVDWEDVFLLTDDNEWPSNIPQFREIMKEYRSE
LKNLAKQVMEIMDENLGLPKGYINKSFNNGEEGSENAFFGTKVSHYPPCPNPEMVNGLRA
HTDAGGVILLFQDDQVDGLQILKDGEWIDVQPIQNAIVINTGDQIEVLSNGKYKSVWHRV
LAKENGNRRSIASFYNPSLKATIAPAPQLIHIDNDNNNDNNKVELISNYPAFKFGDYMNV
YSEQKFSPKEPRFQAVRAM*

Transcript Sequence

Transcript ID

PGSC0003DMT400015435
Transcript Infomation

pacid=37465489 locus=PGSC0003DMG400006025 ID=PGSC0003DMT400015435.v4.03 annot-version=v4.03
Sequence

ATGGCTATTCCAGTAATTGATTTTTCAAAGCTTAATGGAGAGGAAAGAGCCAACACTTTA
GCTCAAATTGCCACTTCTTGTGAAGAATGGGGATTTTTTCAGTTGGTGAATCATGGGATT
CCTGTGGAACTTCTTGAGAAGGTGAAGAGAGTTTCTTCAGAAAGTTTTAAGAAGGAAAGA
GAAGATAATTTCAACAAATCAACAGCAATAAACTTGTTGAATGAAGTGGAGAAAAATAAA
AGCAATAATAACAAAGTTGAAAATGTAGATTGGGAAGATGTATTCCTTCTTACTGATGAT
AATGAATGGCCCTCCAATATTCCTCAATTCAGGGAAATAATGAAAGAGTATCGATCAGAA
TTGAAGAATCTAGCAAAACAAGTGATGGAAATAATGGACGAAAACTTAGGTCTACCAAAA
GGTTACATCAATAAATCTTTTAATAACGGCGAAGAAGGTTCCGAAAATGCGTTTTTCGGG
ACTAAAGTCAGTCATTATCCACCATGCCCAAATCCCGAAATGGTGAATGGTCTACGCGCA
CACACCGATGCTGGTGGTGTAATTTTGCTTTTTCAGGATGATCAGGTGGACGGTCTTCAA
ATCCTCAAGGATGGTGAATGGATCGATGTTCAGCCGATCCAGAATGCCATCGTTATCAAC
ACGGGTGACCAAATTGAAGTCCTTAGTAACGGGAAATACAAGAGTGTTTGGCATCGCGTT
TTGGCTAAGGAAAATGGGAATAGAAGGTCAATTGCGTCTTTTTATAATCCGTCTTTAAAA
GCTACGATTGCTCCTGCACCTCAACTAATTCATATTGATAATGATAATAATAATGATAAT
AATAAGGTGGAACTAATTAGTAATTATCCAGCTTTTAAGTTTGGTGATTATATGAATGTT
TATAGTGAACAAAAATTTTCACCTAAAGAGCCAAGATTCCAAGCTGTTAGAGCCATGTGA