Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015409
CDS Infomation

pacid=37475803 polypeptide=PGSC0003DMP400010679 locus=PGSC0003DMG401006007 ID=PGSC0003DMT400015409.v4.03 annot-version=v4.03
Sequence

ATGGACAAATTGAGAGAAGGAATTGTGAAAATGTCCAACAGTGAACCTAATGCGCCATTA
TCAGAGACCCAGAATTCGATTCTTCAACAGCACCTTGATCGTTATATGTCTGATCTTCAG
ACTACCCCCGATCATCCTCCTTACGCTTGGATGATTGAAAAGGCGTTGCAAGAATTGGAC
GAAGAAGGGGGTTCTAATGAAGACTCGATATCTGAGTTTATCATGAAAAATAATGACAGT
TTGCCAAGGGCTCATACGACAATGTTGAAACATCATCTGGAGAAGATGTGTGAAAGGGGG
GAAATTGTTATGATTGATGGAGGACGGTTTTTGCTTCCTGGTGACAGCGAAAACTCAAAT
CCAACGAGAAAAGGAAAGAGCAAGAAAAGGGGGAGTTCGTCAAATACACAAAAGAAGCAG
CAGCAAAAGGAAAAAGAGGAGGATCCTCGACATGTGGTGCATTTGGAGCAACCAAAAAAA
CAGGGTCGTGGGAGGCCTACTAAGAACAAGGAAGACGGGGCCAAAAAAGGTGATGGCACA
ACTTCAGCATTGGCAACAAAGGAACCAGACGATCAGCATGAGAGGGCTCTCAAGGGCAAG
GAAGACGGGGCTGATCCAGATGCTGTACTTGTGAAGGACTCGAGATTGTCTAGAAGAAGC
AAAACGATCAAGGACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400010679
PEP Infomation

pacid=37475803 transcript=PGSC0003DMT400015409 locus=PGSC0003DMG401006007 ID=PGSC0003DMT400015409.v4.03 annot-version=v4.03
Sequence

MDKLREGIVKMSNSEPNAPLSETQNSILQQHLDRYMSDLQTTPDHPPYAWMIEKALQELD
EEGGSNEDSISEFIMKNNDSLPRAHTTMLKHHLEKMCERGEIVMIDGGRFLLPGDSENSN
PTRKGKSKKRGSSSNTQKKQQQKEKEEDPRHVVHLEQPKKQGRGRPTKNKEDGAKKGDGT
TSALATKEPDDQHERALKGKEDGADPDAVLVKDSRLSRRSKTIKD*

Transcript Sequence

Transcript ID

PGSC0003DMT400015409
Transcript Infomation

pacid=37475803 locus=PGSC0003DMG401006007 ID=PGSC0003DMT400015409.v4.03 annot-version=v4.03
Sequence

ATGGACAAATTGAGAGAAGGAATTGTGAAAATGTCCAACAGTGAACCTAATGCGCCATTA
TCAGAGACCCAGAATTCGATTCTTCAACAGCACCTTGATCGTTATATGTCTGATCTTCAG
ACTACCCCCGATCATCCTCCTTACGCTTGGATGATTGAAAAGGCGTTGCAAGAATTGGAC
GAAGAAGGGGGTTCTAATGAAGACTCGATATCTGAGTTTATCATGAAAAATAATGACAGT
TTGCCAAGGGCTCATACGACAATGTTGAAACATCATCTGGAGAAGATGTGTGAAAGGGGG
GAAATTGTTATGATTGATGGAGGACGGTTTTTGCTTCCTGGTGACAGCGAAAACTCAAAT
CCAACGAGAAAAGGAAAGAGCAAGAAAAGGGGGAGTTCGTCAAATACACAAAAGAAGCAG
CAGCAAAAGGAAAAAGAGGAGGATCCTCGACATGTGGTGCATTTGGAGCAACCAAAAAAA
CAGGGTCGTGGGAGGCCTACTAAGAACAAGGAAGACGGGGCCAAAAAAGGTGATGGCACA
ACTTCAGCATTGGCAACAAAGGAACCAGACGATCAGCATGAGAGGGCTCTCAAGGGCAAG
GAAGACGGGGCTGATCCAGATGCTGTACTTGTGAAGGACTCGAGATTGTCTAGAAGAAGC
AAAACGATCAAGGACTAG