Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015397
CDS Infomation

pacid=37475945 polypeptide=PGSC0003DMP400010670 locus=PGSC0003DMG400006003 ID=PGSC0003DMT400015397.v4.03 annot-version=v4.03
Sequence

ATGAATCAACAAAAAAGTAGTAGTAGTACTTCTTTGCTTCCAATAACTCCCGAAATTATT
CGTTGGAGTTACGATGTTTTTCTAAGTTTTAGAGGTGAAGATGTACGTAAAACTTTTGTT
GATCATCTCTATGTTGCTCTTCAACAAAAAGGGATCAACACATTCAAAGATTCTGAGAAA
TTAGAGAAAGGTAATTCTATTTCACCAGGACTTATGAGAGCAATTGAAGAATCGCGCATA
TCTTTGATTATTTTCTCAAAGAACTATGCTAATTCGAGGTGGTGTTTGGATGAAGTAGCG
AAAATCATGGAATGCAAGAACGTGAAAGGACAAATTGTTATTCCGGTGTTTTATGATGTA
GATCCATCAACAGTAAGGAAACAAAAATCGAGCTTTGAAGAAGCATTTAACAATTATGAA
GATTGTTTCAAGGTGCAAAAATGGAGAGGAGCACTAGAGGAAGCAGCTAATTTATCTGGT
TGGGATTTGCCAAATACTTCCAATGCGCATGAAGCTATAGTGATAAAGCAAATTGTGGAA
GATATAATGGCTAGATTGGGTAGTCAGAGACACACGAAAAACGGTGAAAATCTTGTTGGA
ATCGAGTCACGTATGCAAAAAGTGTATAAAATGCTTGGCATGGGGTCTGGTGGAGTTCGT
TTCGTTGGAATATTGGGAATGAGTGGAGTTGGGAAGACAACTCTAGCGAGAGTCATTTAT
GATAATATTCGGAGTCACTTTGAAGGTTCGTGTTTTCTTCATGAAGTTAGAGACCGTTCT
GCAAAACAAGGACTAGAGCATTTGCAAGCTATACTTCTTTCTGAGATCCTTGTCATGAAA
GATGTAAACATCAACAATTTATACGAAGGAGTTAATATGCAGATACAAAGATTACAGTAC
AAAAAGGTTCTTCTTGTTCTTGATGATGTTGATCATGTAGATCAGTTAGATGTTTTAGCG
AGGAAACGTGAATGGTTTGGTCATGGAAGTAGAGTTATCATAACAACTAAAGATAAGCAC
TTGCTTGTTGAACATGAGGTAGAAAAGATATACAGAATGACAACATTAAATAAAGACGAA
AGTTTGCAGCTCTTTAAGCTATATGCCTTCAAGAAAAACCGTCTTATGGATGAATTTAGG
GATGTTTCAGCTCAAATTATAAGGCATTGTGATGGACTCCCGTTGGCTTTGAAAGTCCTC
GGAAGTTTCTTGTATGGAAGAGATTTGGATGAATGGACAAGTGAAGTAGAACGATTGGAA
CAAATCCCAGAAGACAGAATTGTGAAGAAACTCGAATTATGTTTCAATCGACTAAACAGA
ATTGAACAAAAAATATTACTAGATATTGTGTGTTTCTTTATAGGAAAGAAGAAACAATCA
GTTACAAGAATATTAGAGAGTTTTAATTTTAGTCCTGTTATTGGCATAAAAGTTCTCATG
GAGAAATCTCTGATTACGGTTTCACAAGGTCGGATTCAGGTGCATCAATTGATACAAGAA
ATGTGTTGGTATATTATCCGTCAAGAAGCTTCTGATGATCCAAGAAGATATAGTAGGTTG
TGGCTACCTCATCATATTTCTCATGTACTTGCTGGAGATTTGGGCACTGAAAAGATTGAA
GGCATGTCATTGAACTGGGCTTTTGCACAAGAAGTGAATGTCAGCAGCGCGGCATTCACA
CAAATGAGCAGACTAAGGTTTCTCAGTATCCAGAACAAAAATGTTCATCAGGGCCCTAAT
TTCCTACCTGGTGAGTTGAGGTGGTTCAATTGGCACGCGTATCCATCAAGAAGTCTGCCT
GTTAGTTTTCAGGGCGAAAAGTTAGTTGGTTTGAAGTTGAAAGATAGTGGAATCATACAA
CTTTGGCAAGGCTCCAAGGTTCTAGGAAAATTGAAATACATCAACCTTAGTGAGTCACGG
AAGCTAGTAAGGACCCCGGATTTTTCAGGCATCCCTAATCTTGAAAGGCTGGTACTTGAA
GGATGTGTAAATTTGGTAGAAATCAATTTTTCTGTTAGAGATCTCAGAAGGCTAGTCTTG
TTGAATCTGAAGAACTGTAGAAATTTAAAGACCTTACCGAAGATCATTCAATTGGAAAGT
CTTGAGGTTTTGATTCTATCAGGCTGCTTAAAGCTCAAAAAGTTGTCGATAATAAAAGAA
GAAATGAATCGTTTGTCACAAGTGTACTTGGAAGGAACTGGTTTGAGAGAACTACCCGAA
TCAATTGAGAACTTTTCAGGAGTAACTTTGATAAATCTAAGTAACTGCAAGGATCTTGAG
AATCTTCCAAGCAGTATTTTTAGATTGAAGCGTCTAAGAACACTTGATCTATCCGGATGT
TCAAGACTAGAAGAATTATCAGATGATTTGGGACTTCTAGTCGGTTTAAAGGAGCTCCAT
TGTGATGACACAGCCATCCGAACACTGCCTTCCTCTATCTCTCAGCTAAAGAACCTTAAG
CACTTATCTCTCCGGGGATGTAAAAATGCTTTGGGTTTACAAGTATGGACCTCACTCATT
TTGTCGCGGCTATTTGGGAAAGGCCACAACTCTATGGGTCTGGTTTTTCCTAATTTATCA
GGTCTTTGCTCATTGACAAAGCTGGACATAAGTGATTGCAATATTTCAGACGGACGAATC
CTATCTAATCTTGGGTTCTTGCCATCTTTGGAGGAAGTGAATCTCGGGAAGAATAACTTT
GTTGATATTCCATCTGCAAGCATCAATGGTCTATCTCGACTTAAAGTTGTTGAATTGGTT
GGTTGTAAGAGGCTCGAGATTTTTCCAGAGCTTCCTTCAAGTATAGAAGAGGTGTATGCC
GATGAATGTACATCATTGAGGAGTACTGGCATTGATCAATTAAGCAAATATCCAATGTTG
TATCGAGTTTCACTTACTCAATGTCACCAACTTGTCAAAAATGAACCTGATGTTGCTATT
ATTGATTCATTGTGGAATCACATGCTCAAGGGACTATCGATGGTGGATGACGAATTCAGT
ATATGTATCCCTGGATCTGAAGTTCCTGACTGGTTTATGTACAAGAACTTGGGTCCTTCA
TTATCAGTGAAGCTACCTAAAAATTGGTACACAAACAAATTCATGGGCTTTGCTCTTTGT
GTTGTTTTTGACAGTTTTAAGGAACCTTCCTGTATGAATCATGGTTACCTTAAAAAAATA
ACCCAATTTCATCTCATGTTTAAGCTCGTAAGGCACGATGGAAAGGCTGGTCTGCTTTTT
AAAAGTATTGGCTCAGTAGGAAGTGAGGAATGTCCTGATTCAGGGCACACTCTCCTGGCC
TATACATCATTTGATAATTTTTGGTCAACGTACGAGAAATGTGTTTGCAATCCTAACGAC
TGGATTCAAATCAAGGTTTGTGGGACTGATGCAAATGTTGCAATCAAAGGTTGGGGAATG
CATCTTCTGTACGAGAACGATATTATAAATGAGGAGTTGATGACACAAAATGCCACCTCT
CAATCTGGAAAGATGGGCTTGTTTCATGCAATCTTTGATGGATCAAAGTATACGAAAAGA
AAACGACACGGACATAAATCGTTTTCTAGGCTGCCACCATATGATGAACCAGGATATGTC
AATTCCTTTGGAGAAACAAGTAATGAAGATTTTGATGAAACATTATTTGGGACAGGAATT
ACTGGGATTATAGAAGGTCTACAAACAGTTTCTGTAGCTATTCTTGAATCAATTTTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400010670
PEP Infomation

pacid=37475945 transcript=PGSC0003DMT400015397 locus=PGSC0003DMG400006003 ID=PGSC0003DMT400015397.v4.03 annot-version=v4.03
Sequence

MNQQKSSSSTSLLPITPEIIRWSYDVFLSFRGEDVRKTFVDHLYVALQQKGINTFKDSEK
LEKGNSISPGLMRAIEESRISLIIFSKNYANSRWCLDEVAKIMECKNVKGQIVIPVFYDV
DPSTVRKQKSSFEEAFNNYEDCFKVQKWRGALEEAANLSGWDLPNTSNAHEAIVIKQIVE
DIMARLGSQRHTKNGENLVGIESRMQKVYKMLGMGSGGVRFVGILGMSGVGKTTLARVIY
DNIRSHFEGSCFLHEVRDRSAKQGLEHLQAILLSEILVMKDVNINNLYEGVNMQIQRLQY
KKVLLVLDDVDHVDQLDVLARKREWFGHGSRVIITTKDKHLLVEHEVEKIYRMTTLNKDE
SLQLFKLYAFKKNRLMDEFRDVSAQIIRHCDGLPLALKVLGSFLYGRDLDEWTSEVERLE
QIPEDRIVKKLELCFNRLNRIEQKILLDIVCFFIGKKKQSVTRILESFNFSPVIGIKVLM
EKSLITVSQGRIQVHQLIQEMCWYIIRQEASDDPRRYSRLWLPHHISHVLAGDLGTEKIE
GMSLNWAFAQEVNVSSAAFTQMSRLRFLSIQNKNVHQGPNFLPGELRWFNWHAYPSRSLP
VSFQGEKLVGLKLKDSGIIQLWQGSKVLGKLKYINLSESRKLVRTPDFSGIPNLERLVLE
GCVNLVEINFSVRDLRRLVLLNLKNCRNLKTLPKIIQLESLEVLILSGCLKLKKLSIIKE
EMNRLSQVYLEGTGLRELPESIENFSGVTLINLSNCKDLENLPSSIFRLKRLRTLDLSGC
SRLEELSDDLGLLVGLKELHCDDTAIRTLPSSISQLKNLKHLSLRGCKNALGLQVWTSLI
LSRLFGKGHNSMGLVFPNLSGLCSLTKLDISDCNISDGRILSNLGFLPSLEEVNLGKNNF
VDIPSASINGLSRLKVVELVGCKRLEIFPELPSSIEEVYADECTSLRSTGIDQLSKYPML
YRVSLTQCHQLVKNEPDVAIIDSLWNHMLKGLSMVDDEFSICIPGSEVPDWFMYKNLGPS
LSVKLPKNWYTNKFMGFALCVVFDSFKEPSCMNHGYLKKITQFHLMFKLVRHDGKAGLLF
KSIGSVGSEECPDSGHTLLAYTSFDNFWSTYEKCVCNPNDWIQIKVCGTDANVAIKGWGM
HLLYENDIINEELMTQNATSQSGKMGLFHAIFDGSKYTKRKRHGHKSFSRLPPYDEPGYV
NSFGETSNEDFDETLFGTGITGIIEGLQTVSVAILESIF*

Transcript Sequence

Transcript ID

PGSC0003DMT400015397
Transcript Infomation

pacid=37475945 locus=PGSC0003DMG400006003 ID=PGSC0003DMT400015397.v4.03 annot-version=v4.03
Sequence

ATGAATCAACAAAAAAGTAGTAGTAGTACTTCTTTGCTTCCAATAACTCCCGAAATTATT
CGTTGGAGTTACGATGTTTTTCTAAGTTTTAGAGGTGAAGATGTACGTAAAACTTTTGTT
GATCATCTCTATGTTGCTCTTCAACAAAAAGGGATCAACACATTCAAAGATTCTGAGAAA
TTAGAGAAAGGTAATTCTATTTCACCAGGACTTATGAGAGCAATTGAAGAATCGCGCATA
TCTTTGATTATTTTCTCAAAGAACTATGCTAATTCGAGGTGGTGTTTGGATGAAGTAGCG
AAAATCATGGAATGCAAGAACGTGAAAGGACAAATTGTTATTCCGGTGTTTTATGATGTA
GATCCATCAACAGTAAGGAAACAAAAATCGAGCTTTGAAGAAGCATTTAACAATTATGAA
GATTGTTTCAAGGTGCAAAAATGGAGAGGAGCACTAGAGGAAGCAGCTAATTTATCTGGT
TGGGATTTGCCAAATACTTCCAATGCGCATGAAGCTATAGTGATAAAGCAAATTGTGGAA
GATATAATGGCTAGATTGGGTAGTCAGAGACACACGAAAAACGGTGAAAATCTTGTTGGA
ATCGAGTCACGTATGCAAAAAGTGTATAAAATGCTTGGCATGGGGTCTGGTGGAGTTCGT
TTCGTTGGAATATTGGGAATGAGTGGAGTTGGGAAGACAACTCTAGCGAGAGTCATTTAT
GATAATATTCGGAGTCACTTTGAAGGTTCGTGTTTTCTTCATGAAGTTAGAGACCGTTCT
GCAAAACAAGGACTAGAGCATTTGCAAGCTATACTTCTTTCTGAGATCCTTGTCATGAAA
GATGTAAACATCAACAATTTATACGAAGGAGTTAATATGCAGATACAAAGATTACAGTAC
AAAAAGGTTCTTCTTGTTCTTGATGATGTTGATCATGTAGATCAGTTAGATGTTTTAGCG
AGGAAACGTGAATGGTTTGGTCATGGAAGTAGAGTTATCATAACAACTAAAGATAAGCAC
TTGCTTGTTGAACATGAGGTAGAAAAGATATACAGAATGACAACATTAAATAAAGACGAA
AGTTTGCAGCTCTTTAAGCTATATGCCTTCAAGAAAAACCGTCTTATGGATGAATTTAGG
GATGTTTCAGCTCAAATTATAAGGCATTGTGATGGACTCCCGTTGGCTTTGAAAGTCCTC
GGAAGTTTCTTGTATGGAAGAGATTTGGATGAATGGACAAGTGAAGTAGAACGATTGGAA
CAAATCCCAGAAGACAGAATTGTGAAGAAACTCGAATTATGTTTCAATCGACTAAACAGA
ATTGAACAAAAAATATTACTAGATATTGTGTGTTTCTTTATAGGAAAGAAGAAACAATCA
GTTACAAGAATATTAGAGAGTTTTAATTTTAGTCCTGTTATTGGCATAAAAGTTCTCATG
GAGAAATCTCTGATTACGGTTTCACAAGGTCGGATTCAGGTGCATCAATTGATACAAGAA
ATGTGTTGGTATATTATCCGTCAAGAAGCTTCTGATGATCCAAGAAGATATAGTAGGTTG
TGGCTACCTCATCATATTTCTCATGTACTTGCTGGAGATTTGGGCACTGAAAAGATTGAA
GGCATGTCATTGAACTGGGCTTTTGCACAAGAAGTGAATGTCAGCAGCGCGGCATTCACA
CAAATGAGCAGACTAAGGTTTCTCAGTATCCAGAACAAAAATGTTCATCAGGGCCCTAAT
TTCCTACCTGGTGAGTTGAGGTGGTTCAATTGGCACGCGTATCCATCAAGAAGTCTGCCT
GTTAGTTTTCAGGGCGAAAAGTTAGTTGGTTTGAAGTTGAAAGATAGTGGAATCATACAA
CTTTGGCAAGGCTCCAAGGTTCTAGGAAAATTGAAATACATCAACCTTAGTGAGTCACGG
AAGCTAGTAAGGACCCCGGATTTTTCAGGCATCCCTAATCTTGAAAGGCTGGTACTTGAA
GGATGTGTAAATTTGGTAGAAATCAATTTTTCTGTTAGAGATCTCAGAAGGCTAGTCTTG
TTGAATCTGAAGAACTGTAGAAATTTAAAGACCTTACCGAAGATCATTCAATTGGAAAGT
CTTGAGGTTTTGATTCTATCAGGCTGCTTAAAGCTCAAAAAGTTGTCGATAATAAAAGAA
GAAATGAATCGTTTGTCACAAGTGTACTTGGAAGGAACTGGTTTGAGAGAACTACCCGAA
TCAATTGAGAACTTTTCAGGAGTAACTTTGATAAATCTAAGTAACTGCAAGGATCTTGAG
AATCTTCCAAGCAGTATTTTTAGATTGAAGCGTCTAAGAACACTTGATCTATCCGGATGT
TCAAGACTAGAAGAATTATCAGATGATTTGGGACTTCTAGTCGGTTTAAAGGAGCTCCAT
TGTGATGACACAGCCATCCGAACACTGCCTTCCTCTATCTCTCAGCTAAAGAACCTTAAG
CACTTATCTCTCCGGGGATGTAAAAATGCTTTGGGTTTACAAGTATGGACCTCACTCATT
TTGTCGCGGCTATTTGGGAAAGGCCACAACTCTATGGGTCTGGTTTTTCCTAATTTATCA
GGTCTTTGCTCATTGACAAAGCTGGACATAAGTGATTGCAATATTTCAGACGGACGAATC
CTATCTAATCTTGGGTTCTTGCCATCTTTGGAGGAAGTGAATCTCGGGAAGAATAACTTT
GTTGATATTCCATCTGCAAGCATCAATGGTCTATCTCGACTTAAAGTTGTTGAATTGGTT
GGTTGTAAGAGGCTCGAGATTTTTCCAGAGCTTCCTTCAAGTATAGAAGAGGTGTATGCC
GATGAATGTACATCATTGAGGAGTACTGGCATTGATCAATTAAGCAAATATCCAATGTTG
TATCGAGTTTCACTTACTCAATGTCACCAACTTGTCAAAAATGAACCTGATGTTGCTATT
ATTGATTCATTGTGGAATCACATGCTCAAGGGACTATCGATGGTGGATGACGAATTCAGT
ATATGTATCCCTGGATCTGAAGTTCCTGACTGGTTTATGTACAAGAACTTGGGTCCTTCA
TTATCAGTGAAGCTACCTAAAAATTGGTACACAAACAAATTCATGGGCTTTGCTCTTTGT
GTTGTTTTTGACAGTTTTAAGGAACCTTCCTGTATGAATCATGGTTACCTTAAAAAAATA
ACCCAATTTCATCTCATGTTTAAGCTCGTAAGGCACGATGGAAAGGCTGGTCTGCTTTTT
AAAAGTATTGGCTCAGTAGGAAGTGAGGAATGTCCTGATTCAGGGCACACTCTCCTGGCC
TATACATCATTTGATAATTTTTGGTCAACGTACGAGAAATGTGTTTGCAATCCTAACGAC
TGGATTCAAATCAAGGTTTGTGGGACTGATGCAAATGTTGCAATCAAAGGTTGGGGAATG
CATCTTCTGTACGAGAACGATATTATAAATGAGGAGTTGATGACACAAAATGCCACCTCT
CAATCTGGAAAGATGGGCTTGTTTCATGCAATCTTTGATGGATCAAAGTATACGAAAAGA
AAACGACACGGACATAAATCGTTTTCTAGGCTGCCACCATATGATGAACCAGGATATGTC
AATTCCTTTGGAGAAACAAGTAATGAAGATTTTGATGAAACATTATTTGGGACAGGAATT
ACTGGGATTATAGAAGGTCTACAAACAGTTTCTGTAGCTATTCTTGAATCAATTTTTTAA