Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015349
CDS Infomation

pacid=37472582 polypeptide=PGSC0003DMP400010632 locus=PGSC0003DMG400005987 ID=PGSC0003DMT400015349.v4.03 annot-version=v4.03
Sequence

ATGGCCGGCGGAGAACCCACCGCTGTCGCCGGCGACTCTACCAAAATCCCTCTCCAGGTT
GTTCATGACGTTTGTCGAATTTCCGGTGCCGGATTTGCTGGTTTCTTCAAGAAAGATTGT
ACTGATTTGGCAAGAAGAGTGTCCCTTTTGGCTTATTTGCTTGAGGAAATCAGAGATTCC
AACACCCATTTGGGTTCTTCATCATCTTCCCATGATTCATGCTTGTATGATCTCTCCATA
GCTCTCAAAGCTGCAAAAAGACTTCTTTTAGCAGCAAATGACTTTGATCCCAAGATCTCA
GCTGACGTGGAAAGGAAGAAAATTGTCTTTCAATTTCAATGTGTAACATGGAAATTGGTG
AAATCCCTAGGCAGCTTACCATATGACCAGTTCGACATATCAGAAGAAGTACAAGAGCAG
GTTGAATTGGTCAGATCACAGTTGACACGAGCTAAAGAGAGGTATGGTGGACCTTTGACT
TCAAATGTATTATCTCGAGCATTATCCCAACCATTAGATAAGGAGATTGATCCGCTTCAG
TCGGGCAGTAGGGGAGTTGGAAGTTTACATCTAGAGAATGTTGGCAATATTGATCATGAA
GTTAGGCCAAAACTTGGAGATCTTCCCTTAGGTAACACCCCAAACGGCAATGATTGTGTT
CAGATAGTTCAGGAACCAGAAAATCTAAGGAATTCATCCAAAAATTCTGAGGTTACTTCT
CCCAAAAGTCCTGGTTTGGCCAGGAAAGATGACTCACCCAGCAAGAATCTTGTGGAGAAT
AAGAAGCCCAATTCTCCTATAATTCCTGAAGAGTATCTTTGCCCTATATCCCTTGAGCTC
ATGAGGGATCCTGTAATTGTGGCCACTGGACAGACTTACGAGAGATCTTTCATACAAAGA
TGGATAGACGGTGGCAACACAAGATGCCCAAAAACTCAGCAAATACTCCAAGATCTTACG
CTGACACCAAATATTGCTTTAAGAAGTCTCATTTCTGATTGGTGTGCAAAGAACAATGTA
GAGCAGCCAACTGCATTGGCAAATGGGAGAATAAAGCGAAGTGATGGATCGTTTCGTGAT
GTTAGTGGGGATATAGCAGCTATTGAGGCAATTGTACGCAAACTTTCAAGCAGGTCCACT
GATGATCGGAGGGCTGCAGTAGCGGAGATCCGGTCTCTATCCAAAAGAAGCACAGACAAC
AGAGTTTTGATTGCTGAAGCTGGAGCAATCCCGGTGTTAGTCAACTTGTTGACATCTGAA
GACGGTCAAATCCAAGAAAATGCCGTCACTTCTATTCTTAACCTTTCTATATTTGACAAC
AACAAGGGGCTTATCATGCTTGCCGGTGCTGTTCCTTCAATTGTTCAAGTTCTCAGAGCT
GGAAGCATGGAAGCAAAAGAAAATGCAGCAGCGACCATCTTTAGTTTATCACTTGGAGAT
GAGAACAAAATTATAATAGGTGCATCGGGGGCCATCCCAGCTCTGGTAGAATTGCTTCAG
ACTGGAAGCACCAGAGGGAAGAAAGACGCTGCAACAGCATTATTTAACTTATGCATATAT
CAAGGAAACAAGGGCAGGGCTGTTCGGGCTGGGATTATACCAGCACTATTAATGATGCTG
AAAGATTCAAGCAACTGCATGGTTGATGAAGCTTTGACCATTCTTTCAGTTCTTGCCAGC
CACCAAGAGGCCAAGGCTGCCATAGCTAAAGCTAGCACGATCCCTGTATTGATAGATCTA
CTAAGGACAGGTTTACCTCGTAATAAAGAGAATGCTGCTGCTATCTTGCTCTCCTTGTGC
AAAAGAGATACTGTGAATTTATCTTGCCTTTGTAGGCTCGGTGCACTTATACCTCTTACA
GAGCTTGCTAATACTGGCACAGAGAGGGCCAAGAGGAAGGCTACTTCATTGTTGGAGCAC
CTTCGAAAACCTCTGCAACCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400010632
PEP Infomation

pacid=37472582 transcript=PGSC0003DMT400015349 locus=PGSC0003DMG400005987 ID=PGSC0003DMT400015349.v4.03 annot-version=v4.03
Sequence

MAGGEPTAVAGDSTKIPLQVVHDVCRISGAGFAGFFKKDCTDLARRVSLLAYLLEEIRDS
NTHLGSSSSSHDSCLYDLSIALKAAKRLLLAANDFDPKISADVERKKIVFQFQCVTWKLV
KSLGSLPYDQFDISEEVQEQVELVRSQLTRAKERYGGPLTSNVLSRALSQPLDKEIDPLQ
SGSRGVGSLHLENVGNIDHEVRPKLGDLPLGNTPNGNDCVQIVQEPENLRNSSKNSEVTS
PKSPGLARKDDSPSKNLVENKKPNSPIIPEEYLCPISLELMRDPVIVATGQTYERSFIQR
WIDGGNTRCPKTQQILQDLTLTPNIALRSLISDWCAKNNVEQPTALANGRIKRSDGSFRD
VSGDIAAIEAIVRKLSSRSTDDRRAAVAEIRSLSKRSTDNRVLIAEAGAIPVLVNLLTSE
DGQIQENAVTSILNLSIFDNNKGLIMLAGAVPSIVQVLRAGSMEAKENAAATIFSLSLGD
ENKIIIGASGAIPALVELLQTGSTRGKKDAATALFNLCIYQGNKGRAVRAGIIPALLMML
KDSSNCMVDEALTILSVLASHQEAKAAIAKASTIPVLIDLLRTGLPRNKENAAAILLSLC
KRDTVNLSCLCRLGALIPLTELANTGTERAKRKATSLLEHLRKPLQP*

Transcript Sequence

Transcript ID

PGSC0003DMT400015349
Transcript Infomation

pacid=37472582 locus=PGSC0003DMG400005987 ID=PGSC0003DMT400015349.v4.03 annot-version=v4.03
Sequence

ATGGCCGGCGGAGAACCCACCGCTGTCGCCGGCGACTCTACCAAAATCCCTCTCCAGGTT
GTTCATGACGTTTGTCGAATTTCCGGTGCCGGATTTGCTGGTTTCTTCAAGAAAGATTGT
ACTGATTTGGCAAGAAGAGTGTCCCTTTTGGCTTATTTGCTTGAGGAAATCAGAGATTCC
AACACCCATTTGGGTTCTTCATCATCTTCCCATGATTCATGCTTGTATGATCTCTCCATA
GCTCTCAAAGCTGCAAAAAGACTTCTTTTAGCAGCAAATGACTTTGATCCCAAGATCTCA
GCTGACGTGGAAAGGAAGAAAATTGTCTTTCAATTTCAATGTGTAACATGGAAATTGGTG
AAATCCCTAGGCAGCTTACCATATGACCAGTTCGACATATCAGAAGAAGTACAAGAGCAG
GTTGAATTGGTCAGATCACAGTTGACACGAGCTAAAGAGAGGTATGGTGGACCTTTGACT
TCAAATGTATTATCTCGAGCATTATCCCAACCATTAGATAAGGAGATTGATCCGCTTCAG
TCGGGCAGTAGGGGAGTTGGAAGTTTACATCTAGAGAATGTTGGCAATATTGATCATGAA
GTTAGGCCAAAACTTGGAGATCTTCCCTTAGGTAACACCCCAAACGGCAATGATTGTGTT
CAGATAGTTCAGGAACCAGAAAATCTAAGGAATTCATCCAAAAATTCTGAGGTTACTTCT
CCCAAAAGTCCTGGTTTGGCCAGGAAAGATGACTCACCCAGCAAGAATCTTGTGGAGAAT
AAGAAGCCCAATTCTCCTATAATTCCTGAAGAGTATCTTTGCCCTATATCCCTTGAGCTC
ATGAGGGATCCTGTAATTGTGGCCACTGGACAGACTTACGAGAGATCTTTCATACAAAGA
TGGATAGACGGTGGCAACACAAGATGCCCAAAAACTCAGCAAATACTCCAAGATCTTACG
CTGACACCAAATATTGCTTTAAGAAGTCTCATTTCTGATTGGTGTGCAAAGAACAATGTA
GAGCAGCCAACTGCATTGGCAAATGGGAGAATAAAGCGAAGTGATGGATCGTTTCGTGAT
GTTAGTGGGGATATAGCAGCTATTGAGGCAATTGTACGCAAACTTTCAAGCAGGTCCACT
GATGATCGGAGGGCTGCAGTAGCGGAGATCCGGTCTCTATCCAAAAGAAGCACAGACAAC
AGAGTTTTGATTGCTGAAGCTGGAGCAATCCCGGTGTTAGTCAACTTGTTGACATCTGAA
GACGGTCAAATCCAAGAAAATGCCGTCACTTCTATTCTTAACCTTTCTATATTTGACAAC
AACAAGGGGCTTATCATGCTTGCCGGTGCTGTTCCTTCAATTGTTCAAGTTCTCAGAGCT
GGAAGCATGGAAGCAAAAGAAAATGCAGCAGCGACCATCTTTAGTTTATCACTTGGAGAT
GAGAACAAAATTATAATAGGTGCATCGGGGGCCATCCCAGCTCTGGTAGAATTGCTTCAG
ACTGGAAGCACCAGAGGGAAGAAAGACGCTGCAACAGCATTATTTAACTTATGCATATAT
CAAGGAAACAAGGGCAGGGCTGTTCGGGCTGGGATTATACCAGCACTATTAATGATGCTG
AAAGATTCAAGCAACTGCATGGTTGATGAAGCTTTGACCATTCTTTCAGTTCTTGCCAGC
CACCAAGAGGCCAAGGCTGCCATAGCTAAAGCTAGCACGATCCCTGTATTGATAGATCTA
CTAAGGACAGGTTTACCTCGTAATAAAGAGAATGCTGCTGCTATCTTGCTCTCCTTGTGC
AAAAGAGATACTGTGAATTTATCTTGCCTTTGTAGGCTCGGTGCACTTATACCTCTTACA
GAGCTTGCTAATACTGGCACAGAGAGGGCCAAGAGGAAGGCTACTTCATTGTTGGAGCAC
CTTCGAAAACCTCTGCAACCTTGA