Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015314
CDS Infomation

pacid=37473255 polypeptide=PGSC0003DMP400010606 locus=PGSC0003DMG400005972 ID=PGSC0003DMT400015314.v4.03 annot-version=v4.03
Sequence

ATGGAATACATTAAGGCCCAAACTGCACCAAAAGATGGTAAACTTCTTGCCATTGGACAT
TCTATGGGAGGAATATTACTGTATGCTTGGCTATCACAGTGTGGATTGCAAGGAAGAGAG
CCTGGATTAACTGCTATTGTAACTTTGGCTTCATCACTGGATTACACATCTTCGAAGTCT
GCACTCAGACTGCTCCTACCCCTTGCTGATCCTGCCCAAGCTCTCAATGTACCTGTTGTC
CCTTTAGGAGCATTACTTGCAGCAGCTTATCCTCTTTCTTCTCGCCCTCCTTATGTGTTG
TCTTGGCTTAATGATTTAATATCAGCTGCAGACATGATGCATCCAGAGTTGCTGAAAAAG
CTCGTATTAAATAACTTCTGTACTATTCCTGCTAAACTTATTTTGCAGTTGACTACAGCT
TTTCGAGAAGGGGGACTCCGTGACAGAAGTGGTAAAATATTCTACAAGGATAATCTTCAC
AAAACCAATGTACCCGTGTTGGCTGTTGCTGGAGATAAAGACATAATCTGCCCACCAGAA
GCAGTGTGCGAAACGGCAAAGCTTATCCCCGAGCACTTGGTCACCTACAAAGTATTGGGG
GATGATAATGGTCAGCATTATGCTCATTATGACTTGGTGGGAGGACGCATGGCCGCAGAA
CATGTATATCCTTGTATAATCCAATTTTTAAGCCGTTATGATGATACTAGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400010606
PEP Infomation

pacid=37473255 transcript=PGSC0003DMT400015314 locus=PGSC0003DMG400005972 ID=PGSC0003DMT400015314.v4.03 annot-version=v4.03
Sequence

MEYIKAQTAPKDGKLLAIGHSMGGILLYAWLSQCGLQGREPGLTAIVTLASSLDYTSSKS
ALRLLLPLADPAQALNVPVVPLGALLAAAYPLSSRPPYVLSWLNDLISAADMMHPELLKK
LVLNNFCTIPAKLILQLTTAFREGGLRDRSGKIFYKDNLHKTNVPVLAVAGDKDIICPPE
AVCETAKLIPEHLVTYKVLGDDNGQHYAHYDLVGGRMAAEHVYPCIIQFLSRYDDTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400015314
Transcript Infomation

pacid=37473255 locus=PGSC0003DMG400005972 ID=PGSC0003DMT400015314.v4.03 annot-version=v4.03
Sequence

ATGGAATACATTAAGGCCCAAACTGCACCAAAAGATGGTAAACTTCTTGCCATTGGACAT
TCTATGGGAGGAATATTACTGTATGCTTGGCTATCACAGTGTGGATTGCAAGGAAGAGAG
CCTGGATTAACTGCTATTGTAACTTTGGCTTCATCACTGGATTACACATCTTCGAAGTCT
GCACTCAGACTGCTCCTACCCCTTGCTGATCCTGCCCAAGCTCTCAATGTACCTGTTGTC
CCTTTAGGAGCATTACTTGCAGCAGCTTATCCTCTTTCTTCTCGCCCTCCTTATGTGTTG
TCTTGGCTTAATGATTTAATATCAGCTGCAGACATGATGCATCCAGAGTTGCTGAAAAAG
CTCGTATTAAATAACTTCTGTACTATTCCTGCTAAACTTATTTTGCAGTTGACTACAGCT
TTTCGAGAAGGGGGACTCCGTGACAGAAGTGGTAAAATATTCTACAAGGATAATCTTCAC
AAAACCAATGTACCCGTGTTGGCTGTTGCTGGAGATAAAGACATAATCTGCCCACCAGAA
GCAGTGTGCGAAACGGCAAAGCTTATCCCCGAGCACTTGGTCACCTACAAAGTATTGGGG
GATGATAATGGTCAGCATTATGCTCATTATGACTTGGTGGGAGGACGCATGGCCGCAGAA
CATGTATATCCTTGTATAATCCAATTTTTAAGCCGTTATGATGATACTAGCTAG