Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015308
CDS Infomation

pacid=37476071 polypeptide=PGSC0003DMP400010600 locus=PGSC0003DMG400005970 ID=PGSC0003DMT400015308.v4.03 annot-version=v4.03
Sequence

ATGTCGGATGAAGAGGATCCTTACCCTGATCCTGATCCTGATCCGGTAAGCATTCTGCAA
AGGATAAGTGAGTATCACTTGACGGATGACAAAAAGAAGGAAATCAAGTTGATTAAGACA
GAGCTATGGTTTCTGGGTAGATTTCTCCTCTTGAGGCATTGTGAGTGGAGTAGATCCCTT
CAAATGCGGATTAGAAGTCTCCTGGTATTTGCAGAAGATCTGTATCGCTCTAACTTTGAT
GCTGATCCCTCTTACGTGCTAGGATCGATAGAGCATTGCAAATTCTTTATCCCAAAAAAT
TATTTGGATTCAGAAGAAAGTCTACTTCCTGTTACTACGCCTCTGAACCACATAGATATG
CTGGAATACATAGACAATGTTGTACAGAATTTTAAGGACCTGCTGATTGTTCGCCTTGTC
AAGCTGCCTGATGTACATTCTCAAGTGGAATCGTTCGTAAAGGAGTTGAGAGCACTGAAG
AAGTTTATCTTCTTTCTGGGAAAAATATGCATTTCAACAATACAAATTAACTGCTGGCAA
ACTTTCTGGCTTCATTTTAGATTTGTGACTACCCGTGCAGCAATTTTCTTATACTTGCCT
TGTTACGACAGATTTTCTCATATGATGGAGAATACCTTGATGTGTAGCCAGATTGTCCCC
GGTGACGAGCTCCTGAAATATGTTTTAAAGTTATCATCATTCAACAGCACTCATGTCAAC
TGGTACCTCGATAAAGCTGCGGATGAATTCATGGATTTTCTTCTGCACGTACACATGCAT
TTAGGAGCGGATTCATGGACTACAGATCAAAAGTATACTTTTCCTGAACAGATCAACCGT
TTGAGAATTTTGTTCAAAGAGTTACCATTGATTAACGACATTCAGGATGAGATGAGGATC
CATTTCTTCAAGCGACTAGTGACGCTGGTCATTCATGCTGGACTTACTGTCTACTCGCAG
GGTAATTGGGACCAAAAATTGCTTCTTCTCGATGGCATTATTCAGTCAGTCAAAACAGAG
ATTTGCCACAAGATCCGAGAGTGGGTAACATCTCATTTGCCTAAGAATGATAAATTGGGT
TTTTCCAATTGCCTTCTTATTAGCTTGAAAGAGTTCCTGTCTGGTCATTCTGCTTCACTT
GCTTCTGTGAAGGATCAAATCGAGGTAGTCCATGAGGAGCTTAACTTTTTCGAGCCTTTC
ATCATGCGTGTAGCAGAACAAGGCAATAATAAGCATCACGAACTCCAAAATCTTGTTGGA
AGAGTCATTGATAAGGCTTATGAGGTCGAGTACATACTTGATTCTTTTGCAATTAGTGAT
GTACCTATTACTTTTCTTAGGACGTGGCTCTTGGAAATCATAAGGGAGATTGAGCTCATT
AAGACTGAGTTGACCAAACCCAAGGGAAAAACTATGACAAGTGCCTCCCAAGCTACCGAC
GGAGAACTGGTTGGTTTTACAGATGTCTGTAAAACTATAAGAGATCAACTAGTTGGAGGA
TCACGAGAACTGGATGTTGTTTCCATTGTGGGTATGGCTGGATCAGGCAAAACAACCCTT
GCTCGAAGTTTCATCAATGATGGCATAATTGGTACTCATTTTGATATCTGTGCAGAGTGT
CGTTTTTCACAAGAATACACGCGTGAAGACTTGCTGTTTTCCATTTTGAGTTCTGCTAAT
TCTGGTCTCACTGATATTAGTAAAAGAAGTGCTGATATATTAGCTGATAGACTAAGAAAA
ACTCTATTGCCAAAGAGGTACCTCTTAATCATTGACGATGTGTGGGCAGTACAAGCATGG
GACGATTTGAGATTATGCTTTCCTGAGGCCAAAAAAGGTAGCAGAATAATTCTGACGACC
AGACTTGAAGAAGTTGCTACGTATGCTAAATGTGTCACTGAACCCATACACTTGCGTAGT
ATGAAAGATTCAGAGAGTTGGTTGTTATTACAAAAAAAGGTATTTGGGGAAGAAATGTGC
CCCGAAGATCTAAAAGAAGTTGGGCAAAACATTGCATTCAAGTGTAATGGGCTGCCACTT
TCCATTGTTTTAGTGGCTGGTCTTCTCACAAAGATTGACAAGACAGAAAGATGCTGGACG
CGGATGGAATTAAGTTTTGGGGAAAGAGTGCAGGATGGCGCAAAGGATTTAGTAAAATTA
AGTTATGAAGATTTACCTAACAAACTGAAATCATGCTTTTTATATTTCAGTGCATTTCTA
GAGGACAGGGAAATTTCAGTGTCAAAATTAACAAGCTTATGGATTGCTGAGGCATTCTTA
AAAAACAATGAGGACAAGTGTTTGGAGGATACGGCAGAAGATTACTTGAAGGATCTTATC
GGAAGAAACCTCATTATGATAACTAAGAGGAACTCAACCGGGAAGATCAAAGCATGTCGT
GTGCATGATCTAATGCTCGATTTCTGCAAGGAGAAAGCTAAGGAAGATAATTTCCTTTTG
TGGCTGAAAAGGGATCGTCATTCCAATCCTCCGCGTTTTTATTCTAAAAGGCCTATGCAC
CGCCGTTTATCCTTTTGTTCTAATCGGGATGATCTTTCTGAGTGGAAGCCATCAAGCTCA
CATGCTCGTTCTATCTTATTCAGGGAGCTTAGTGATAGTGCATGTTCATCAATGGGACAT
GCCTCTTTCATCTTTGGCAACTTCAAATATCTCAGGGTGTTAGACTTAGAGGTGGTTGTT
GTAGATTCTTTTCCCACTGAACTTAATCAGCTAAGGTACCTTGCTGTTCAAACTACTAAG
AATTCTATTCCATCATCTATAGAAAATCTTTGGAATCTTCAAACGTTCATAGTCAAAAGA
AATGGAGGACAAGTATGGTTGCCAGATACTTTTTGGAAGCTGAGTAAGTTGAGATATGTT
AGCATTTGTGATGGCGCTTTGTTTGCTTCGCGTGATGCACCAGAATCCTGTGATGGAAAG
TCCTTAAAGCTGGACAATTTGAAAACGTTTTCTTCAATATATATCTCCAGGATGAACAAT
ATGGAAAGGATGGTAAGAAGAACACCCAATCTTCGGAAGTTAAGATGCGTATTTGCTGAT
TTAGGGCGTTGGGGAAAGAATGAAAATCGGTTTCCTGTATTAGACTCATTATCTCAACTT
GAAACGCTAAAAGTAGTCTTCGTTGGTATCTCGGAGGTAGGTCCTTCAAGATTAAACTTT
CCAGAGAATCTCAAGAAACTGACATTATGCAAATTTCCTTTGCCACCTGAGGAAATTGCA
ACTATTGCCAAACTTGTCAACCTTGAGGTACTTAAACTGCGACAAGTTGCCTTTGAAATG
GGTGAATGGGAAGTGAGAGATCAGGAGTTTTCTCAGCTCAAACTCTTGGAACTAGAAAAT
CTCCAACTCTCAAAATGGGAAGTGTCTGAGGAAGCCTTCGATCGCCTTGAGAAATTGGTT
TTGCGTGGATGTTTACATCTCGAAGCCATCCCTGATAGTTTTCAGGAACTAAGTTGTTTG
CGATACATTGAGGTAAAATCATGCAGTGAAGATGTTGCCGACTCAGCTAGGATTATCAAA
GAAACAAGAGAGGGTTATGGCCACAAATGTGACGTTAAAATCTTTTCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400010600
PEP Infomation

pacid=37476071 transcript=PGSC0003DMT400015308 locus=PGSC0003DMG400005970 ID=PGSC0003DMT400015308.v4.03 annot-version=v4.03
Sequence

MSDEEDPYPDPDPDPVSILQRISEYHLTDDKKKEIKLIKTELWFLGRFLLLRHCEWSRSL
QMRIRSLLVFAEDLYRSNFDADPSYVLGSIEHCKFFIPKNYLDSEESLLPVTTPLNHIDM
LEYIDNVVQNFKDLLIVRLVKLPDVHSQVESFVKELRALKKFIFFLGKICISTIQINCWQ
TFWLHFRFVTTRAAIFLYLPCYDRFSHMMENTLMCSQIVPGDELLKYVLKLSSFNSTHVN
WYLDKAADEFMDFLLHVHMHLGADSWTTDQKYTFPEQINRLRILFKELPLINDIQDEMRI
HFFKRLVTLVIHAGLTVYSQGNWDQKLLLLDGIIQSVKTEICHKIREWVTSHLPKNDKLG
FSNCLLISLKEFLSGHSASLASVKDQIEVVHEELNFFEPFIMRVAEQGNNKHHELQNLVG
RVIDKAYEVEYILDSFAISDVPITFLRTWLLEIIREIELIKTELTKPKGKTMTSASQATD
GELVGFTDVCKTIRDQLVGGSRELDVVSIVGMAGSGKTTLARSFINDGIIGTHFDICAEC
RFSQEYTREDLLFSILSSANSGLTDISKRSADILADRLRKTLLPKRYLLIIDDVWAVQAW
DDLRLCFPEAKKGSRIILTTRLEEVATYAKCVTEPIHLRSMKDSESWLLLQKKVFGEEMC
PEDLKEVGQNIAFKCNGLPLSIVLVAGLLTKIDKTERCWTRMELSFGERVQDGAKDLVKL
SYEDLPNKLKSCFLYFSAFLEDREISVSKLTSLWIAEAFLKNNEDKCLEDTAEDYLKDLI
GRNLIMITKRNSTGKIKACRVHDLMLDFCKEKAKEDNFLLWLKRDRHSNPPRFYSKRPMH
RRLSFCSNRDDLSEWKPSSSHARSILFRELSDSACSSMGHASFIFGNFKYLRVLDLEVVV
VDSFPTELNQLRYLAVQTTKNSIPSSIENLWNLQTFIVKRNGGQVWLPDTFWKLSKLRYV
SICDGALFASRDAPESCDGKSLKLDNLKTFSSIYISRMNNMERMVRRTPNLRKLRCVFAD
LGRWGKNENRFPVLDSLSQLETLKVVFVGISEVGPSRLNFPENLKKLTLCKFPLPPEEIA
TIAKLVNLEVLKLRQVAFEMGEWEVRDQEFSQLKLLELENLQLSKWEVSEEAFDRLEKLV
LRGCLHLEAIPDSFQELSCLRYIEVKSCSEDVADSARIIKETREGYGHKCDVKIFS*

Transcript Sequence

Transcript ID

PGSC0003DMT400015308
Transcript Infomation

pacid=37476071 locus=PGSC0003DMG400005970 ID=PGSC0003DMT400015308.v4.03 annot-version=v4.03
Sequence

ATGTCGGATGAAGAGGATCCTTACCCTGATCCTGATCCTGATCCGGTAAGCATTCTGCAA
AGGATAAGTGAGTATCACTTGACGGATGACAAAAAGAAGGAAATCAAGTTGATTAAGACA
GAGCTATGGTTTCTGGGTAGATTTCTCCTCTTGAGGCATTGTGAGTGGAGTAGATCCCTT
CAAATGCGGATTAGAAGTCTCCTGGTATTTGCAGAAGATCTGTATCGCTCTAACTTTGAT
GCTGATCCCTCTTACGTGCTAGGATCGATAGAGCATTGCAAATTCTTTATCCCAAAAAAT
TATTTGGATTCAGAAGAAAGTCTACTTCCTGTTACTACGCCTCTGAACCACATAGATATG
CTGGAATACATAGACAATGTTGTACAGAATTTTAAGGACCTGCTGATTGTTCGCCTTGTC
AAGCTGCCTGATGTACATTCTCAAGTGGAATCGTTCGTAAAGGAGTTGAGAGCACTGAAG
AAGTTTATCTTCTTTCTGGGAAAAATATGCATTTCAACAATACAAATTAACTGCTGGCAA
ACTTTCTGGCTTCATTTTAGATTTGTGACTACCCGTGCAGCAATTTTCTTATACTTGCCT
TGTTACGACAGATTTTCTCATATGATGGAGAATACCTTGATGTGTAGCCAGATTGTCCCC
GGTGACGAGCTCCTGAAATATGTTTTAAAGTTATCATCATTCAACAGCACTCATGTCAAC
TGGTACCTCGATAAAGCTGCGGATGAATTCATGGATTTTCTTCTGCACGTACACATGCAT
TTAGGAGCGGATTCATGGACTACAGATCAAAAGTATACTTTTCCTGAACAGATCAACCGT
TTGAGAATTTTGTTCAAAGAGTTACCATTGATTAACGACATTCAGGATGAGATGAGGATC
CATTTCTTCAAGCGACTAGTGACGCTGGTCATTCATGCTGGACTTACTGTCTACTCGCAG
GGTAATTGGGACCAAAAATTGCTTCTTCTCGATGGCATTATTCAGTCAGTCAAAACAGAG
ATTTGCCACAAGATCCGAGAGTGGGTAACATCTCATTTGCCTAAGAATGATAAATTGGGT
TTTTCCAATTGCCTTCTTATTAGCTTGAAAGAGTTCCTGTCTGGTCATTCTGCTTCACTT
GCTTCTGTGAAGGATCAAATCGAGGTAGTCCATGAGGAGCTTAACTTTTTCGAGCCTTTC
ATCATGCGTGTAGCAGAACAAGGCAATAATAAGCATCACGAACTCCAAAATCTTGTTGGA
AGAGTCATTGATAAGGCTTATGAGGTCGAGTACATACTTGATTCTTTTGCAATTAGTGAT
GTACCTATTACTTTTCTTAGGACGTGGCTCTTGGAAATCATAAGGGAGATTGAGCTCATT
AAGACTGAGTTGACCAAACCCAAGGGAAAAACTATGACAAGTGCCTCCCAAGCTACCGAC
GGAGAACTGGTTGGTTTTACAGATGTCTGTAAAACTATAAGAGATCAACTAGTTGGAGGA
TCACGAGAACTGGATGTTGTTTCCATTGTGGGTATGGCTGGATCAGGCAAAACAACCCTT
GCTCGAAGTTTCATCAATGATGGCATAATTGGTACTCATTTTGATATCTGTGCAGAGTGT
CGTTTTTCACAAGAATACACGCGTGAAGACTTGCTGTTTTCCATTTTGAGTTCTGCTAAT
TCTGGTCTCACTGATATTAGTAAAAGAAGTGCTGATATATTAGCTGATAGACTAAGAAAA
ACTCTATTGCCAAAGAGGTACCTCTTAATCATTGACGATGTGTGGGCAGTACAAGCATGG
GACGATTTGAGATTATGCTTTCCTGAGGCCAAAAAAGGTAGCAGAATAATTCTGACGACC
AGACTTGAAGAAGTTGCTACGTATGCTAAATGTGTCACTGAACCCATACACTTGCGTAGT
ATGAAAGATTCAGAGAGTTGGTTGTTATTACAAAAAAAGGTATTTGGGGAAGAAATGTGC
CCCGAAGATCTAAAAGAAGTTGGGCAAAACATTGCATTCAAGTGTAATGGGCTGCCACTT
TCCATTGTTTTAGTGGCTGGTCTTCTCACAAAGATTGACAAGACAGAAAGATGCTGGACG
CGGATGGAATTAAGTTTTGGGGAAAGAGTGCAGGATGGCGCAAAGGATTTAGTAAAATTA
AGTTATGAAGATTTACCTAACAAACTGAAATCATGCTTTTTATATTTCAGTGCATTTCTA
GAGGACAGGGAAATTTCAGTGTCAAAATTAACAAGCTTATGGATTGCTGAGGCATTCTTA
AAAAACAATGAGGACAAGTGTTTGGAGGATACGGCAGAAGATTACTTGAAGGATCTTATC
GGAAGAAACCTCATTATGATAACTAAGAGGAACTCAACCGGGAAGATCAAAGCATGTCGT
GTGCATGATCTAATGCTCGATTTCTGCAAGGAGAAAGCTAAGGAAGATAATTTCCTTTTG
TGGCTGAAAAGGGATCGTCATTCCAATCCTCCGCGTTTTTATTCTAAAAGGCCTATGCAC
CGCCGTTTATCCTTTTGTTCTAATCGGGATGATCTTTCTGAGTGGAAGCCATCAAGCTCA
CATGCTCGTTCTATCTTATTCAGGGAGCTTAGTGATAGTGCATGTTCATCAATGGGACAT
GCCTCTTTCATCTTTGGCAACTTCAAATATCTCAGGGTGTTAGACTTAGAGGTGGTTGTT
GTAGATTCTTTTCCCACTGAACTTAATCAGCTAAGGTACCTTGCTGTTCAAACTACTAAG
AATTCTATTCCATCATCTATAGAAAATCTTTGGAATCTTCAAACGTTCATAGTCAAAAGA
AATGGAGGACAAGTATGGTTGCCAGATACTTTTTGGAAGCTGAGTAAGTTGAGATATGTT
AGCATTTGTGATGGCGCTTTGTTTGCTTCGCGTGATGCACCAGAATCCTGTGATGGAAAG
TCCTTAAAGCTGGACAATTTGAAAACGTTTTCTTCAATATATATCTCCAGGATGAACAAT
ATGGAAAGGATGGTAAGAAGAACACCCAATCTTCGGAAGTTAAGATGCGTATTTGCTGAT
TTAGGGCGTTGGGGAAAGAATGAAAATCGGTTTCCTGTATTAGACTCATTATCTCAACTT
GAAACGCTAAAAGTAGTCTTCGTTGGTATCTCGGAGGTAGGTCCTTCAAGATTAAACTTT
CCAGAGAATCTCAAGAAACTGACATTATGCAAATTTCCTTTGCCACCTGAGGAAATTGCA
ACTATTGCCAAACTTGTCAACCTTGAGGTACTTAAACTGCGACAAGTTGCCTTTGAAATG
GGTGAATGGGAAGTGAGAGATCAGGAGTTTTCTCAGCTCAAACTCTTGGAACTAGAAAAT
CTCCAACTCTCAAAATGGGAAGTGTCTGAGGAAGCCTTCGATCGCCTTGAGAAATTGGTT
TTGCGTGGATGTTTACATCTCGAAGCCATCCCTGATAGTTTTCAGGAACTAAGTTGTTTG
CGATACATTGAGGTAAAATCATGCAGTGAAGATGTTGCCGACTCAGCTAGGATTATCAAA
GAAACAAGAGAGGGTTATGGCCACAAATGTGACGTTAAAATCTTTTCTTAG