Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015285
CDS Infomation

pacid=37475984 polypeptide=PGSC0003DMP400010585 locus=PGSC0003DMG400005962 ID=PGSC0003DMT400015285.v4.03 annot-version=v4.03
Sequence

ATGTCCTGTTCAATTTTTTTGCTCTTTTTGGCTCTATTTGTGTCAATTTTGGAACAATCG
GTTTCGGTTTCGAACGGATCGCAGCGGGAAATTCTTCGGGCGATTAGTGGTCAAGATGGT
GAAAAGCCTGACTTTGCTGTTGAATTGAACGCCACCAACTTTGATTCAGTACTCAAAGAG
ACTCCTGCCCCTTATGCTATTGTTGAATTTTTTGCACACTGGTGCCCTGCTTGCAGAAAT
TATAAGCCACAATATGAGAAGGTTGCAAGACTCTTCAATGGAGCAAATGCCAGTCATCCA
GGGATCATATTAATGACGAGGGTAGACTGTGCATTAACGATAAATTCTAATCTTTGTGAT
AAGTTCTCTGTGAAGTATTACCCAATGCTTCTCTGGGGCCCTCCTAAGAAGTTTGTTGGT
TGGGATCCAAAACAAGAAAATAGTGAAATACTCACCATTGAAAGAGGACGCACAGCTGAT
ATCCTTCTAGGTTGGATCAACAAACAACTGGGAAGCTCATATGGCTTCGATGATGAGAAG
TATGAGAATGAGCATCTTCAGAGGAACTTTTCGGATCCTGGCCAGATTGCCAAAGCTATA
TATGACGTTGAGGAGGCAACGTCTACTGCCTTTGGCATCATTCTAGACCAAAGAATGATT
AAATCAAAGACTCGGGCTTCACTTATAAAATTCCTTCAACTTTTGGTGGCTCATCATCCT
TCTAAGAGGTGCCGGAAGGGAAGTGCGGATATACTAGTTGACTTTGATAATCTGTGTCCT
TCAGAGATATTGCTAGCGAAGAATGAAGCTGACAGCTGCAGCAAAAAGGGTACACTGGGA
AATTACCAAATTTGTGGGGAAGAGGTTCCTCGTGGATATTGGATGTATTGTCGTGGCAGC
AAGAATGATACCAGAGGTTTCAGTTGCGGTTTGTGGGTGTTGTTACACTCACTCTCCGTC
AGAGTTGAGGATGGAGAAAGTGACTTGGCATTCAGAACTACCTGTGATTTTATATACAAC
TTTTTCGTCTGTGAGGAATGTAGGCAACACTTTCATGGCATGTGTTCAAGTGTATCTAGT
CCTTTCAAGAAAGCGCGTGATTTTTCCCTCTGGTTGTGGAGTGCTCACAACCAAGTTAAT
GAGCGACTAATGAAAGATGAAGAATCACCAGGAACAGGTGATCCTGAATTTCCCAAAGTT
ACTTGGCCTCCAAAGCAACTTTGTCCGTCATGTTATCTCAACCCACGCAAAACGAGCGAT
GAAAATAGTAAGATTGATTGGAACGAGAATGAGGTCTTTAAGTTTCTGGTTAGTTACTAC
GGGAAAGAGCTAGTGAATCTCTACAAGGACAAAGAGCTGCAAGCAGGTGGTGGGACTGAA
AAAACAGTTAATGAGGAGCTGGTAGCTTCAACAAATGCAGTTGTGGTTCCACTGGGAGCT
GCATTGGCAATTGCAGTTGCAAGCTGTGCATTTGGAGCGTTGGCTTGCTTTTGGCGTTCT
CAGCAAAAGAATCGGAAGTATAAACATCTACACTCTTTGAAGAATATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400010585
PEP Infomation

pacid=37475984 transcript=PGSC0003DMT400015285 locus=PGSC0003DMG400005962 ID=PGSC0003DMT400015285.v4.03 annot-version=v4.03
Sequence

MSCSIFLLFLALFVSILEQSVSVSNGSQREILRAISGQDGEKPDFAVELNATNFDSVLKE
TPAPYAIVEFFAHWCPACRNYKPQYEKVARLFNGANASHPGIILMTRVDCALTINSNLCD
KFSVKYYPMLLWGPPKKFVGWDPKQENSEILTIERGRTADILLGWINKQLGSSYGFDDEK
YENEHLQRNFSDPGQIAKAIYDVEEATSTAFGIILDQRMIKSKTRASLIKFLQLLVAHHP
SKRCRKGSADILVDFDNLCPSEILLAKNEADSCSKKGTLGNYQICGEEVPRGYWMYCRGS
KNDTRGFSCGLWVLLHSLSVRVEDGESDLAFRTTCDFIYNFFVCEECRQHFHGMCSSVSS
PFKKARDFSLWLWSAHNQVNERLMKDEESPGTGDPEFPKVTWPPKQLCPSCYLNPRKTSD
ENSKIDWNENEVFKFLVSYYGKELVNLYKDKELQAGGGTEKTVNEELVASTNAVVVPLGA
ALAIAVASCAFGALACFWRSQQKNRKYKHLHSLKNI*

Transcript Sequence

Transcript ID

PGSC0003DMT400015285
Transcript Infomation

pacid=37475984 locus=PGSC0003DMG400005962 ID=PGSC0003DMT400015285.v4.03 annot-version=v4.03
Sequence

ATGTCCTGTTCAATTTTTTTGCTCTTTTTGGCTCTATTTGTGTCAATTTTGGAACAATCG
GTTTCGGTTTCGAACGGATCGCAGCGGGAAATTCTTCGGGCGATTAGTGGTCAAGATGGT
GAAAAGCCTGACTTTGCTGTTGAATTGAACGCCACCAACTTTGATTCAGTACTCAAAGAG
ACTCCTGCCCCTTATGCTATTGTTGAATTTTTTGCACACTGGTGCCCTGCTTGCAGAAAT
TATAAGCCACAATATGAGAAGGTTGCAAGACTCTTCAATGGAGCAAATGCCAGTCATCCA
GGGATCATATTAATGACGAGGGTAGACTGTGCATTAACGATAAATTCTAATCTTTGTGAT
AAGTTCTCTGTGAAGTATTACCCAATGCTTCTCTGGGGCCCTCCTAAGAAGTTTGTTGGT
TGGGATCCAAAACAAGAAAATAGTGAAATACTCACCATTGAAAGAGGACGCACAGCTGAT
ATCCTTCTAGGTTGGATCAACAAACAACTGGGAAGCTCATATGGCTTCGATGATGAGAAG
TATGAGAATGAGCATCTTCAGAGGAACTTTTCGGATCCTGGCCAGATTGCCAAAGCTATA
TATGACGTTGAGGAGGCAACGTCTACTGCCTTTGGCATCATTCTAGACCAAAGAATGATT
AAATCAAAGACTCGGGCTTCACTTATAAAATTCCTTCAACTTTTGGTGGCTCATCATCCT
TCTAAGAGGTGCCGGAAGGGAAGTGCGGATATACTAGTTGACTTTGATAATCTGTGTCCT
TCAGAGATATTGCTAGCGAAGAATGAAGCTGACAGCTGCAGCAAAAAGGGTACACTGGGA
AATTACCAAATTTGTGGGGAAGAGGTTCCTCGTGGATATTGGATGTATTGTCGTGGCAGC
AAGAATGATACCAGAGGTTTCAGTTGCGGTTTGTGGGTGTTGTTACACTCACTCTCCGTC
AGAGTTGAGGATGGAGAAAGTGACTTGGCATTCAGAACTACCTGTGATTTTATATACAAC
TTTTTCGTCTGTGAGGAATGTAGGCAACACTTTCATGGCATGTGTTCAAGTGTATCTAGT
CCTTTCAAGAAAGCGCGTGATTTTTCCCTCTGGTTGTGGAGTGCTCACAACCAAGTTAAT
GAGCGACTAATGAAAGATGAAGAATCACCAGGAACAGGTGATCCTGAATTTCCCAAAGTT
ACTTGGCCTCCAAAGCAACTTTGTCCGTCATGTTATCTCAACCCACGCAAAACGAGCGAT
GAAAATAGTAAGATTGATTGGAACGAGAATGAGGTCTTTAAGTTTCTGGTTAGTTACTAC
GGGAAAGAGCTAGTGAATCTCTACAAGGACAAAGAGCTGCAAGCAGGTGGTGGGACTGAA
AAAACAGTTAATGAGGAGCTGGTAGCTTCAACAAATGCAGTTGTGGTTCCACTGGGAGCT
GCATTGGCAATTGCAGTTGCAAGCTGTGCATTTGGAGCGTTGGCTTGCTTTTGGCGTTCT
CAGCAAAAGAATCGGAAGTATAAACATCTACACTCTTTGAAGAATATATGA