Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015262
CDS Infomation

pacid=37471935 polypeptide=PGSC0003DMP400010569 locus=PGSC0003DMG402005954 ID=PGSC0003DMT400015262.v4.03 annot-version=v4.03
Sequence

ATGAATCCATCAACACATCAAAATGGTGGCCAAAACCCTAATGTGCTGCAGCAGCAGAAG
GAGAAGATGAAGCAGAAGAAGGAGCAGATGTCAATGAAGAAGTTGAGAGAAGCAGTCTTC
AATTTGGCCAACAGTGAACCAAATGTGCGATTATCAGAGAAGCAAAAAGTAGCTCTTCAA
CAACGCATTTCACAATTCTTCTCTCGTCTTACTACTCCTGATCATCCTCCGTATGCTTGG
ATGATTGAAAAGGCCTTGCAAGAATTGAAGGAAAAAGGGGGTTCCAGTGAAGACTCAATA
TCTGAGTTTATTATGAAAGAACATGCCAGTTTGCCATATGCTCATATGACTATGCTGAAA
CATCATCTACAGAAAATGACTGAAAAGGGAGAAATCCGTATGATTGGAGGACGGTTTTTG
CTTCCTGGTGATTGCGAAAGCGTGGTTCCAAAGAAAAAAAGAAAGAGGAAGAAAAAGGGG
AAGTCGGTTATTAAAAAAAAGCAGTCGGGGCAGAAGGAAAAGGAGGAAAAGCATGATGAT
GTGGAAGTTGTTGGAGAACAGAAGGATTTGGATGAACAACAAAATGATGTCACTGTTGAT
GAAAATCGTGGGCAAGAAAATCAAATACATGAAGAATATTTGGAGTCGAATGAGCATCGT
AATGCACCGAGCACAGATAAAGAAGATGGGCAATTAAGTGACCAGAAAAATTCTGTAACT
GGAAATAAAGTTGTTTGTGGAAGAGTTCTAAGGAGTACAATACATAAGCAGAAAGGGAAA
GAACAACTTGATTTTACTGGAGGATCACTGCAATCCTCCATTGCTGCTGAGAGTGCTATA
GGTTGTAATTCGGAGTTGCAGCTATCGCAGCTTAGTCTCAGCACAGTTGAGGAAACAGCT
GATATTAGTAACTTATATCCACAAGAAATTCTGGAAAATGAACAACCTGGTGATGACCTG
CCTCTACTTTTAAGTCCTGAAGTACCTCCAGGTTTTGAGCTTGTGGTGGTGGAGGATGCC
ACAGAAAATAAAGCACATACCTCTTCGTCAGTAGGTTTGGATTTACCAAAAGAAGACCAT
GTTATGCCTCAGAGTTCTGACAAACCTAGTGAAGAGGAGGCTGTTGTTGAGGATCTGTTG
AAGACTAAGAAGCAGAAAAAGAAGCACCATGGCTGGCAGCAAACAAATAGGCCAATGACC
AGGGCGCTAGCGAAAGGAACAGTAACTTTAAATGAACAGCCTAGGTCAGGTAGAAACAGA
AAACAATTACAGTTAGCTATGGAGAGCTCATCAGATCGTGCACAAAGACAACTGAAGCGC
TGGAGCAAAAGCCCGGTTGAACCTAAATCAGTAATTACCTCTAAACTGAAACAATTGGCA
TTGTGTGACTCAGCGGATCAACAGTTAGTACTTATGGAAGAGCCTTTAAGCTTCTCTAAA
CCATTATGTATCTCAGCGGATCAACATGTAGTACAGATGGAAGAGCCATTGGCATTGGCA
ATAAGTGAGGAGGCATTGATTTTGACTGATCCTCAACAAGAGGTGCAATTGAAGCAGCCA
AAAGTTAAGCGTCGTGGGAGGTCTCTCAAGGGCAAGGAGGATGTGGCTGATCCAGATACT
ACACTTTTGAAGGATGTAGGATCATCCAAGAAGCTAACAAAGAAACAAACTCATCGAGGT
GTAGGAATGCACAGTAAAGTGAGCATTGCAGTTCCTTCATTCTCTCTTATGACGACAAAA
GGTCTATACTTAAGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400010569
PEP Infomation

pacid=37471935 transcript=PGSC0003DMT400015262 locus=PGSC0003DMG402005954 ID=PGSC0003DMT400015262.v4.03 annot-version=v4.03
Sequence

MNPSTHQNGGQNPNVLQQQKEKMKQKKEQMSMKKLREAVFNLANSEPNVRLSEKQKVALQ
QRISQFFSRLTTPDHPPYAWMIEKALQELKEKGGSSEDSISEFIMKEHASLPYAHMTMLK
HHLQKMTEKGEIRMIGGRFLLPGDCESVVPKKKRKRKKKGKSVIKKKQSGQKEKEEKHDD
VEVVGEQKDLDEQQNDVTVDENRGQENQIHEEYLESNEHRNAPSTDKEDGQLSDQKNSVT
GNKVVCGRVLRSTIHKQKGKEQLDFTGGSLQSSIAAESAIGCNSELQLSQLSLSTVEETA
DISNLYPQEILENEQPGDDLPLLLSPEVPPGFELVVVEDATENKAHTSSSVGLDLPKEDH
VMPQSSDKPSEEEAVVEDLLKTKKQKKKHHGWQQTNRPMTRALAKGTVTLNEQPRSGRNR
KQLQLAMESSSDRAQRQLKRWSKSPVEPKSVITSKLKQLALCDSADQQLVLMEEPLSFSK
PLCISADQHVVQMEEPLALAISEEALILTDPQQEVQLKQPKVKRRGRSLKGKEDVADPDT
TLLKDVGSSKKLTKKQTHRGVGMHSKVSIAVPSFSLMTTKGLYLS*

Transcript Sequence

Transcript ID

PGSC0003DMT400015262
Transcript Infomation

pacid=37471935 locus=PGSC0003DMG402005954 ID=PGSC0003DMT400015262.v4.03 annot-version=v4.03
Sequence

ATGAATCCATCAACACATCAAAATGGTGGCCAAAACCCTAATGTGCTGCAGCAGCAGAAG
GAGAAGATGAAGCAGAAGAAGGAGCAGATGTCAATGAAGAAGTTGAGAGAAGCAGTCTTC
AATTTGGCCAACAGTGAACCAAATGTGCGATTATCAGAGAAGCAAAAAGTAGCTCTTCAA
CAACGCATTTCACAATTCTTCTCTCGTCTTACTACTCCTGATCATCCTCCGTATGCTTGG
ATGATTGAAAAGGCCTTGCAAGAATTGAAGGAAAAAGGGGGTTCCAGTGAAGACTCAATA
TCTGAGTTTATTATGAAAGAACATGCCAGTTTGCCATATGCTCATATGACTATGCTGAAA
CATCATCTACAGAAAATGACTGAAAAGGGAGAAATCCGTATGATTGGAGGACGGTTTTTG
CTTCCTGGTGATTGCGAAAGCGTGGTTCCAAAGAAAAAAAGAAAGAGGAAGAAAAAGGGG
AAGTCGGTTATTAAAAAAAAGCAGTCGGGGCAGAAGGAAAAGGAGGAAAAGCATGATGAT
GTGGAAGTTGTTGGAGAACAGAAGGATTTGGATGAACAACAAAATGATGTCACTGTTGAT
GAAAATCGTGGGCAAGAAAATCAAATACATGAAGAATATTTGGAGTCGAATGAGCATCGT
AATGCACCGAGCACAGATAAAGAAGATGGGCAATTAAGTGACCAGAAAAATTCTGTAACT
GGAAATAAAGTTGTTTGTGGAAGAGTTCTAAGGAGTACAATACATAAGCAGAAAGGGAAA
GAACAACTTGATTTTACTGGAGGATCACTGCAATCCTCCATTGCTGCTGAGAGTGCTATA
GGTTGTAATTCGGAGTTGCAGCTATCGCAGCTTAGTCTCAGCACAGTTGAGGAAACAGCT
GATATTAGTAACTTATATCCACAAGAAATTCTGGAAAATGAACAACCTGGTGATGACCTG
CCTCTACTTTTAAGTCCTGAAGTACCTCCAGGTTTTGAGCTTGTGGTGGTGGAGGATGCC
ACAGAAAATAAAGCACATACCTCTTCGTCAGTAGGTTTGGATTTACCAAAAGAAGACCAT
GTTATGCCTCAGAGTTCTGACAAACCTAGTGAAGAGGAGGCTGTTGTTGAGGATCTGTTG
AAGACTAAGAAGCAGAAAAAGAAGCACCATGGCTGGCAGCAAACAAATAGGCCAATGACC
AGGGCGCTAGCGAAAGGAACAGTAACTTTAAATGAACAGCCTAGGTCAGGTAGAAACAGA
AAACAATTACAGTTAGCTATGGAGAGCTCATCAGATCGTGCACAAAGACAACTGAAGCGC
TGGAGCAAAAGCCCGGTTGAACCTAAATCAGTAATTACCTCTAAACTGAAACAATTGGCA
TTGTGTGACTCAGCGGATCAACAGTTAGTACTTATGGAAGAGCCTTTAAGCTTCTCTAAA
CCATTATGTATCTCAGCGGATCAACATGTAGTACAGATGGAAGAGCCATTGGCATTGGCA
ATAAGTGAGGAGGCATTGATTTTGACTGATCCTCAACAAGAGGTGCAATTGAAGCAGCCA
AAAGTTAAGCGTCGTGGGAGGTCTCTCAAGGGCAAGGAGGATGTGGCTGATCCAGATACT
ACACTTTTGAAGGATGTAGGATCATCCAAGAAGCTAACAAAGAAACAAACTCATCGAGGT
GTAGGAATGCACAGTAAAGTGAGCATTGCAGTTCCTTCATTCTCTCTTATGACGACAAAA
GGTCTATACTTAAGTTAG