Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015248
CDS Infomation

pacid=37450308 polypeptide=PGSC0003DMP400010559 locus=PGSC0003DMG402005949 ID=PGSC0003DMT400015248.v4.03 annot-version=v4.03
Sequence

ATGTCTCCAGCATCTAGGTCCAAGTCAAAGGACAAAAAGGGTGGCAAGGAACCACCCAAA
GCTGCTTCAAAGCCTTCAAGTGTAAATGCAGGTGCTACTACTCCGACTAGTGGATACAAT
CCTCTTTTAGGAACATTCCATACAATTGAGACAGCTCCTGTGACTTCAAATGCTGCTCTT
CATGTGAACGGTCGTTTCAGAAATATTGACGAGACAGATGACCATAGTGGGCACTCACTT
GGACCTAGCAGCGAGTATGATTCTGTTTCCAATAATGGTAGCTGGTCTGGTGAGTCAGAG
GACCATAAAGAGAAAATGTCTAATCCCCCTCCCCGGGCAGAGACAGTAGTACCTGGCTCT
GATAACGACAAAAGGGAAAAAATCCGTCAGAAAAATGAGAAGAAGCATCAACGTCAAAAG
GAGAGACGAGCTCAAGAATTGCATGAAAAGTGCAGTGGTTATCTGATGTCAAGAAAGCTG
GAAGCACTTGCCCAGCAGCTTGTGGCTATGGGATTCTCTTCAGAACGAGCTACAATGGCT
CTTATCTTAAATGAAGGCAGAGTAGAAGAATCAGTCTCATGGTTATTTGAAGGTGGTGAA
GAAGCAGATAAACTTAAGGAGCATAATCTTGATGGTGGGGGTAATTTGAAAATTGACATT
TCAGAAGAGCTTGCTCGCATTACAGACATGGAAAATAAGCACAAGTGTTCCAAGCAGGAA
GTTGAAAGAGCCTTAGTTGCCTGCGAGGGTGATCTTGAGAAGGCTGAAGAGACTTTGAGG
TCACAAAAACAGGAAGCACATTCTGCGCCATCTAAGCCTGAAGAAAGTGGTGATCCTCCT
ACCTTGGGCATTGGCAAGCTTCCAAATACCACCACCCAGAACTTACTAAGAGCACCTGTA
AAACCTTCACCCAACATGATATTGCCTAAAAGGGATGATAGAGACTTCAATTATACTAAA
GTTGCAGCCACATCAGGATCTTCTGCAGAGAATGGAAGCAAAAGTATACAATCACTTAAA
AGGGTTCAGCCAAAATTGGAGTGGGCCAAGCCACCACAAATGGCAGTGCCTGCTGACAAA
AGGTGGCTAAATGCAGGATCAAATCCTTCTGTTTCCTATTCTTTGGCATCTCCTTTGCAG
GCATCAACCCAATCATCCAAGACGGAAGCTCGTTACATTGCTGTAGGAAATGAATTGAAG
AATCTACAGCTAGGAACTGTGAGAGAACCAGTTATAGTTATGCAACGATCCAATCAATCA
TTTAATCCTAAGCAGACTCCCACCTCAACTTTAAGCTCTTCTCCGCCAGGAAGTACAGCA
GGATGGGTTCCTTACACTGTTGAGACAGTGAAACCCAATGGACCGATGCCACATATTCCT
GGCACAAGAAGCCTGAGCCCAAATGGTGTCAGCACAAACCAGTTGTACAGCCAACTTCAG
TATCAACAACACCAGCAGCCACAACAATTTGTTTCTAGCAACGGCCCACTTGAATCGCCA
GGAACAAGCCGGGGTAATAATTTGTGGAGTAGAACAGGTGCTTTGCAGACACAAACCCTT
TCTGCAGCTTCCTCACTTGGACTCTTCTCTGGGTTTGGCACCAATGGTCTGTCTGGGTCA
TCGTCTCCGGTTGATTGGAACAGTGGTGGCGGCTCAATGGAACAGCTAGATTACACTAAC
ATAGACTGGAGTTTAGATCGTGGGTCTTCATCTTCAAGAGCAGGTGGCATGTGGCCAGGA
ATGAACCCTTTGATGCAAAACAATGCACGTACATATGATTCATTTACCCCTGGACTCGGT
GTTACATCTGCCATGAGACCTGCTCTGTCGAATGGTGGTGGTGTCTCGATACCTGGGCTT
CAGGAACGAGCTGCAACAGCAGAAACATCTACTGGTGGTTCTCGGGAGTGGACTTCTCCC
TTTGAAGAGAAAGATCTTTTTAGCTTACCAAGACAGTTCGTTTCTTCTCCCTCCCTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400010559
PEP Infomation

pacid=37450308 transcript=PGSC0003DMT400015248 locus=PGSC0003DMG402005949 ID=PGSC0003DMT400015248.v4.03 annot-version=v4.03
Sequence

MSPASRSKSKDKKGGKEPPKAASKPSSVNAGATTPTSGYNPLLGTFHTIETAPVTSNAAL
HVNGRFRNIDETDDHSGHSLGPSSEYDSVSNNGSWSGESEDHKEKMSNPPPRAETVVPGS
DNDKREKIRQKNEKKHQRQKERRAQELHEKCSGYLMSRKLEALAQQLVAMGFSSERATMA
LILNEGRVEESVSWLFEGGEEADKLKEHNLDGGGNLKIDISEELARITDMENKHKCSKQE
VERALVACEGDLEKAEETLRSQKQEAHSAPSKPEESGDPPTLGIGKLPNTTTQNLLRAPV
KPSPNMILPKRDDRDFNYTKVAATSGSSAENGSKSIQSLKRVQPKLEWAKPPQMAVPADK
RWLNAGSNPSVSYSLASPLQASTQSSKTEARYIAVGNELKNLQLGTVREPVIVMQRSNQS
FNPKQTPTSTLSSSPPGSTAGWVPYTVETVKPNGPMPHIPGTRSLSPNGVSTNQLYSQLQ
YQQHQQPQQFVSSNGPLESPGTSRGNNLWSRTGALQTQTLSAASSLGLFSGFGTNGLSGS
SSPVDWNSGGGSMEQLDYTNIDWSLDRGSSSSRAGGMWPGMNPLMQNNARTYDSFTPGLG
VTSAMRPALSNGGGVSIPGLQERAATAETSTGGSREWTSPFEEKDLFSLPRQFVSSPSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400015248
Transcript Infomation

pacid=37450308 locus=PGSC0003DMG402005949 ID=PGSC0003DMT400015248.v4.03 annot-version=v4.03
Sequence

ATGTCTCCAGCATCTAGGTCCAAGTCAAAGGACAAAAAGGGTGGCAAGGAACCACCCAAA
GCTGCTTCAAAGCCTTCAAGTGTAAATGCAGGTGCTACTACTCCGACTAGTGGATACAAT
CCTCTTTTAGGAACATTCCATACAATTGAGACAGCTCCTGTGACTTCAAATGCTGCTCTT
CATGTGAACGGTCGTTTCAGAAATATTGACGAGACAGATGACCATAGTGGGCACTCACTT
GGACCTAGCAGCGAGTATGATTCTGTTTCCAATAATGGTAGCTGGTCTGGTGAGTCAGAG
GACCATAAAGAGAAAATGTCTAATCCCCCTCCCCGGGCAGAGACAGTAGTACCTGGCTCT
GATAACGACAAAAGGGAAAAAATCCGTCAGAAAAATGAGAAGAAGCATCAACGTCAAAAG
GAGAGACGAGCTCAAGAATTGCATGAAAAGTGCAGTGGTTATCTGATGTCAAGAAAGCTG
GAAGCACTTGCCCAGCAGCTTGTGGCTATGGGATTCTCTTCAGAACGAGCTACAATGGCT
CTTATCTTAAATGAAGGCAGAGTAGAAGAATCAGTCTCATGGTTATTTGAAGGTGGTGAA
GAAGCAGATAAACTTAAGGAGCATAATCTTGATGGTGGGGGTAATTTGAAAATTGACATT
TCAGAAGAGCTTGCTCGCATTACAGACATGGAAAATAAGCACAAGTGTTCCAAGCAGGAA
GTTGAAAGAGCCTTAGTTGCCTGCGAGGGTGATCTTGAGAAGGCTGAAGAGACTTTGAGG
TCACAAAAACAGGAAGCACATTCTGCGCCATCTAAGCCTGAAGAAAGTGGTGATCCTCCT
ACCTTGGGCATTGGCAAGCTTCCAAATACCACCACCCAGAACTTACTAAGAGCACCTGTA
AAACCTTCACCCAACATGATATTGCCTAAAAGGGATGATAGAGACTTCAATTATACTAAA
GTTGCAGCCACATCAGGATCTTCTGCAGAGAATGGAAGCAAAAGTATACAATCACTTAAA
AGGGTTCAGCCAAAATTGGAGTGGGCCAAGCCACCACAAATGGCAGTGCCTGCTGACAAA
AGGTGGCTAAATGCAGGATCAAATCCTTCTGTTTCCTATTCTTTGGCATCTCCTTTGCAG
GCATCAACCCAATCATCCAAGACGGAAGCTCGTTACATTGCTGTAGGAAATGAATTGAAG
AATCTACAGCTAGGAACTGTGAGAGAACCAGTTATAGTTATGCAACGATCCAATCAATCA
TTTAATCCTAAGCAGACTCCCACCTCAACTTTAAGCTCTTCTCCGCCAGGAAGTACAGCA
GGATGGGTTCCTTACACTGTTGAGACAGTGAAACCCAATGGACCGATGCCACATATTCCT
GGCACAAGAAGCCTGAGCCCAAATGGTGTCAGCACAAACCAGTTGTACAGCCAACTTCAG
TATCAACAACACCAGCAGCCACAACAATTTGTTTCTAGCAACGGCCCACTTGAATCGCCA
GGAACAAGCCGGGGTAATAATTTGTGGAGTAGAACAGGTGCTTTGCAGACACAAACCCTT
TCTGCAGCTTCCTCACTTGGACTCTTCTCTGGGTTTGGCACCAATGGTCTGTCTGGGTCA
TCGTCTCCGGTTGATTGGAACAGTGGTGGCGGCTCAATGGAACAGCTAGATTACACTAAC
ATAGACTGGAGTTTAGATCGTGGGTCTTCATCTTCAAGAGCAGGTGGCATGTGGCCAGGA
ATGAACCCTTTGATGCAAAACAATGCACGTACATATGATTCATTTACCCCTGGACTCGGT
GTTACATCTGCCATGAGACCTGCTCTGTCGAATGGTGGTGGTGTCTCGATACCTGGGCTT
CAGGAACGAGCTGCAACAGCAGAAACATCTACTGGTGGTTCTCGGGAGTGGACTTCTCCC
TTTGAAGAGAAAGATCTTTTTAGCTTACCAAGACAGTTCGTTTCTTCTCCCTCCCTGTAG