Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015245
CDS Infomation

pacid=37450183 polypeptide=PGSC0003DMP400010556 locus=PGSC0003DMG400005948 ID=PGSC0003DMT400015245.v4.03 annot-version=v4.03
Sequence

ATGGCTAACAGAGACGCAGTTCCAAAAATTTTACCCAAAGTAGTAGGAGGGGGAGAGGTT
AAGAAGAAGAATGGCCTAGCAGATGGAAGAACTAGGCGTGCTTTGGGAGATATTGGAAAC
CTTGTCACTGGTCCTGCAATTGGAGCAAAGCCTCAAACTAAGGTTTCTCGACCCATCACT
AGGAGGTCTGCTGCACAGTTGATAGTTAAGGGACAAGAACCACTGCAGAAGAACAAGACG
AAGCCTCTTGTAACTAAAGGAGTTGCAGCAAGAAAAGTTGGTGTTCCAGCAAAACCAGAA
GCTAATAAAAAGGATTCTGTCAAAGCGAAAGCTGGAACAATTAGTGTTATATGCCCTGAT
GAGGATGTGAAAACCATTGAAAAGATCACCTTGAAAGAAAGAAAAGTAAGGAAGAGTGGA
AAGACTCTAACTTCTATCCTAACTGCGCGAAGCAAGGCTGCTTGTGGACTCTCCAACAAA
CCAAGAACACAGATTGTTGATATTGATGCTGCTGATGTTGATAATCACTTGGCTGGTGTT
GAATATGTTGAGGATATTTACAAATTCTATAAGCTCACAGAGGACGAAAATCGACCATGT
GATTACATGGATTCACAGCCAGAGATCAATGACAGGGTGAGAGCAATTCTTGTGGACTGG
CTGATAGAAGCACACAAAAGGTTTGAGCTGAGGCCTGAAAGCCTGTATCTCACAGTCAAC
ATAATGGACCGTTTCCTGTCAGAAGAGACTGTTCCTAGAAGGGAACTTCAGTTACTATGC
ATCAGCTCAATGCTTATTGCCTGCAAATATGAAGAGATTTGGGCTCCAGAGGTTAATGAC
TTCCTAACAATAACAGACAATGCTTATGTCAGGGATCAGATACTTCTGATGGAGAAAGTA
ATTTTGGGAAAGCTGGAGTGGTATTTAACTGTCCCAACGCCATACGTCTTTCTGGTTCGT
TACATTAAAGCTGCAGTTCCATCTGATCAGGAGATGGAGAACATGACATTTTTCTTGGCT
GAGCTCGGGCTGATGAACTACACTACCGTGATATCCTACTGTCCATCAAAGTTTGCTGCT
TCTGCTGTTTATGCTGCTCGTAGTACTCTCAACAAGAGCCCTCGATGGACTGACACTCTG
AAGCACCACACTGGCTACTCAGAAGACCAGCTGAGGGAATGTGCAAAACAATTAGTTAGC
TTCCACTCTGGTGCTGCTGAAAACAAGCTGAAGGCAGTTTTTAGGAAGTTTTCTAGTCCA
GATAGAGGTGCTGTTGCCCTCTTGCCCCCTGCAAGAGATGTTCATATAGGAAGTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400010556
PEP Infomation

pacid=37450183 transcript=PGSC0003DMT400015245 locus=PGSC0003DMG400005948 ID=PGSC0003DMT400015245.v4.03 annot-version=v4.03
Sequence

MANRDAVPKILPKVVGGGEVKKKNGLADGRTRRALGDIGNLVTGPAIGAKPQTKVSRPIT
RRSAAQLIVKGQEPLQKNKTKPLVTKGVAARKVGVPAKPEANKKDSVKAKAGTISVICPD
EDVKTIEKITLKERKVRKSGKTLTSILTARSKAACGLSNKPRTQIVDIDAADVDNHLAGV
EYVEDIYKFYKLTEDENRPCDYMDSQPEINDRVRAILVDWLIEAHKRFELRPESLYLTVN
IMDRFLSEETVPRRELQLLCISSMLIACKYEEIWAPEVNDFLTITDNAYVRDQILLMEKV
ILGKLEWYLTVPTPYVFLVRYIKAAVPSDQEMENMTFFLAELGLMNYTTVISYCPSKFAA
SAVYAARSTLNKSPRWTDTLKHHTGYSEDQLRECAKQLVSFHSGAAENKLKAVFRKFSSP
DRGAVALLPPARDVHIGSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400015245
Transcript Infomation

pacid=37450183 locus=PGSC0003DMG400005948 ID=PGSC0003DMT400015245.v4.03 annot-version=v4.03
Sequence

ATGGCTAACAGAGACGCAGTTCCAAAAATTTTACCCAAAGTAGTAGGAGGGGGAGAGGTT
AAGAAGAAGAATGGCCTAGCAGATGGAAGAACTAGGCGTGCTTTGGGAGATATTGGAAAC
CTTGTCACTGGTCCTGCAATTGGAGCAAAGCCTCAAACTAAGGTTTCTCGACCCATCACT
AGGAGGTCTGCTGCACAGTTGATAGTTAAGGGACAAGAACCACTGCAGAAGAACAAGACG
AAGCCTCTTGTAACTAAAGGAGTTGCAGCAAGAAAAGTTGGTGTTCCAGCAAAACCAGAA
GCTAATAAAAAGGATTCTGTCAAAGCGAAAGCTGGAACAATTAGTGTTATATGCCCTGAT
GAGGATGTGAAAACCATTGAAAAGATCACCTTGAAAGAAAGAAAAGTAAGGAAGAGTGGA
AAGACTCTAACTTCTATCCTAACTGCGCGAAGCAAGGCTGCTTGTGGACTCTCCAACAAA
CCAAGAACACAGATTGTTGATATTGATGCTGCTGATGTTGATAATCACTTGGCTGGTGTT
GAATATGTTGAGGATATTTACAAATTCTATAAGCTCACAGAGGACGAAAATCGACCATGT
GATTACATGGATTCACAGCCAGAGATCAATGACAGGGTGAGAGCAATTCTTGTGGACTGG
CTGATAGAAGCACACAAAAGGTTTGAGCTGAGGCCTGAAAGCCTGTATCTCACAGTCAAC
ATAATGGACCGTTTCCTGTCAGAAGAGACTGTTCCTAGAAGGGAACTTCAGTTACTATGC
ATCAGCTCAATGCTTATTGCCTGCAAATATGAAGAGATTTGGGCTCCAGAGGTTAATGAC
TTCCTAACAATAACAGACAATGCTTATGTCAGGGATCAGATACTTCTGATGGAGAAAGTA
ATTTTGGGAAAGCTGGAGTGGTATTTAACTGTCCCAACGCCATACGTCTTTCTGGTTCGT
TACATTAAAGCTGCAGTTCCATCTGATCAGGAGATGGAGAACATGACATTTTTCTTGGCT
GAGCTCGGGCTGATGAACTACACTACCGTGATATCCTACTGTCCATCAAAGTTTGCTGCT
TCTGCTGTTTATGCTGCTCGTAGTACTCTCAACAAGAGCCCTCGATGGACTGACACTCTG
AAGCACCACACTGGCTACTCAGAAGACCAGCTGAGGGAATGTGCAAAACAATTAGTTAGC
TTCCACTCTGGTGCTGCTGAAAACAAGCTGAAGGCAGTTTTTAGGAAGTTTTCTAGTCCA
GATAGAGGTGCTGTTGCCCTCTTGCCCCCTGCAAGAGATGTTCATATAGGAAGTTCTTGA