Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015241
CDS Infomation

pacid=37453609 polypeptide=PGSC0003DMP400010552 locus=PGSC0003DMG400005947 ID=PGSC0003DMT400015241.v4.03 annot-version=v4.03
Sequence

ATGGCAATAGCTGCACCAGAACAGCTTAATCTTACGGAAGTTCCAACTTGGGGGTCTAGG
ACCGTTGATTGTTTCGAGAAATTGGAGCAGATTGGTGAAGGCACTTATGGTCAAGTGTAC
ATGGCAAAAGAAATTAGAACGGGGGAAATTGTTGCTTTGAAAAAGATACGCATGGACAAT
GAAAGAGAAGGGTTTCCAATAACTGCTATACGTGAGATTAAAATCTTAAAGAAGCTGCAC
CATGAAAATGTCATTGACCTGAAAGAGATTGTAACATCTCCAGGTCGTGATAAGGATGAC
CAAGGGAGGCCAGATGGTAACAAGTATAAAGGTGGAATCTACATGGTCTTTGAGTACATG
GACCATGATTTGACTGGGCTTGCTGATCGTCCTGGAATGAGATTTTCAGTTCCGCAGATT
AAGTGTTACATGAGGCAGCTTTTGACGGGACTGCACTATTGTCATGTAAATCAAGTACTT
CATCGTGATATTAAAGGTTCCAATCTTCTGATTGACAACAAAGGCAATCTGAAGCTTGCT
GATTTTGGGCTTGCTCGATCCTTCTCAAATGATCACAATGCAAATCTTACAAATCGTGTG
ATTACTTTATGGTACAGACCACCTGAGCTGCTTCTTGGGACCACAAAGTATGGTCCAGCC
GTTGATATGTGGTCAGTTGGTTGCATCTTTGCTGAGCTGCTTCATGGAAAACCAATTTTT
CCAGGGAAGGATGAGCCAGAGCAGCTGAACAAGATTTTTGAGTTGTGTGGCTCTCCTGAC
GAGGTTAATTGGCCTGGAGTTTCCAAGATTCCATGGTATAACAATTTCAAACCATCAAGA
CCATTGAAAAGACGTCTAAAGGAGGTTTTCAGACACTTTGACCGACATGCCTTGGAGTTG
CTTGACAAGATGCTGACCCTTGACCCATCTCAGAGAATATCAGCCAAGGATGCACTTGAT
GCCGAGTATTTCTGGACTGATCCATTACCCTGCGATCCAAAGAGTTTACCAACCTATGAA
GCTTCACATGAGTTCCAGACAAAGAAAAAACGACAGCAGCAGAGGCAGCATGAGGAAGCA
GCTAAACGTCAGAAACTGCATCACCAGCAGCAGCATGGTCGGCTTCCACCTGTTCAGCAG
TCAGGGCAAGGACATACTCAAATAAGACCAGGGCCAAATCCCCCAATGCATGCATCCCAT
CCTCAGGTTGCTGGCGGACCTAGCCACCACTATGCAAAGCCACATGGACCTCCAGCAGGA
CCGGGCAGATATCCAGCTGGTGGAAATCCTTCTGGAGGATACGGTCACCCTACTCGTGGC
CAAGGTGGAGCTTATGGCAGTGGTCGATACCCACCTCAAGGAAGGGGTACCCAATACAGT
TCAGGAGGAATGCCAGGAAGCAGTGGTCCCCGGGGAGTTGGAGGCCCAAATTATCCCCAC
GGTGCCCCATATGGGTCTTCTGGCACTGGACGTGGCTCAAATGTGAATCGCAATCAACAA
CAATACAACTGGCAGCAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400010552
PEP Infomation

pacid=37453609 transcript=PGSC0003DMT400015241 locus=PGSC0003DMG400005947 ID=PGSC0003DMT400015241.v4.03 annot-version=v4.03
Sequence

MAIAAPEQLNLTEVPTWGSRTVDCFEKLEQIGEGTYGQVYMAKEIRTGEIVALKKIRMDN
EREGFPITAIREIKILKKLHHENVIDLKEIVTSPGRDKDDQGRPDGNKYKGGIYMVFEYM
DHDLTGLADRPGMRFSVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNKGNLKLA
DFGLARSFSNDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIF
PGKDEPEQLNKIFELCGSPDEVNWPGVSKIPWYNNFKPSRPLKRRLKEVFRHFDRHALEL
LDKMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPTYEASHEFQTKKKRQQQRQHEEA
AKRQKLHHQQQHGRLPPVQQSGQGHTQIRPGPNPPMHASHPQVAGGPSHHYAKPHGPPAG
PGRYPAGGNPSGGYGHPTRGQGGAYGSGRYPPQGRGTQYSSGGMPGSSGPRGVGGPNYPH
GAPYGSSGTGRGSNVNRNQQQYNWQQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400015241
Transcript Infomation

pacid=37453609 locus=PGSC0003DMG400005947 ID=PGSC0003DMT400015241.v4.03 annot-version=v4.03
Sequence

ATGGCAATAGCTGCACCAGAACAGCTTAATCTTACGGAAGTTCCAACTTGGGGGTCTAGG
ACCGTTGATTGTTTCGAGAAATTGGAGCAGATTGGTGAAGGCACTTATGGTCAAGTGTAC
ATGGCAAAAGAAATTAGAACGGGGGAAATTGTTGCTTTGAAAAAGATACGCATGGACAAT
GAAAGAGAAGGGTTTCCAATAACTGCTATACGTGAGATTAAAATCTTAAAGAAGCTGCAC
CATGAAAATGTCATTGACCTGAAAGAGATTGTAACATCTCCAGGTCGTGATAAGGATGAC
CAAGGGAGGCCAGATGGTAACAAGTATAAAGGTGGAATCTACATGGTCTTTGAGTACATG
GACCATGATTTGACTGGGCTTGCTGATCGTCCTGGAATGAGATTTTCAGTTCCGCAGATT
AAGTGTTACATGAGGCAGCTTTTGACGGGACTGCACTATTGTCATGTAAATCAAGTACTT
CATCGTGATATTAAAGGTTCCAATCTTCTGATTGACAACAAAGGCAATCTGAAGCTTGCT
GATTTTGGGCTTGCTCGATCCTTCTCAAATGATCACAATGCAAATCTTACAAATCGTGTG
ATTACTTTATGGTACAGACCACCTGAGCTGCTTCTTGGGACCACAAAGTATGGTCCAGCC
GTTGATATGTGGTCAGTTGGTTGCATCTTTGCTGAGCTGCTTCATGGAAAACCAATTTTT
CCAGGGAAGGATGAGCCAGAGCAGCTGAACAAGATTTTTGAGTTGTGTGGCTCTCCTGAC
GAGGTTAATTGGCCTGGAGTTTCCAAGATTCCATGGTATAACAATTTCAAACCATCAAGA
CCATTGAAAAGACGTCTAAAGGAGGTTTTCAGACACTTTGACCGACATGCCTTGGAGTTG
CTTGACAAGATGCTGACCCTTGACCCATCTCAGAGAATATCAGCCAAGGATGCACTTGAT
GCCGAGTATTTCTGGACTGATCCATTACCCTGCGATCCAAAGAGTTTACCAACCTATGAA
GCTTCACATGAGTTCCAGACAAAGAAAAAACGACAGCAGCAGAGGCAGCATGAGGAAGCA
GCTAAACGTCAGAAACTGCATCACCAGCAGCAGCATGGTCGGCTTCCACCTGTTCAGCAG
TCAGGGCAAGGACATACTCAAATAAGACCAGGGCCAAATCCCCCAATGCATGCATCCCAT
CCTCAGGTTGCTGGCGGACCTAGCCACCACTATGCAAAGCCACATGGACCTCCAGCAGGA
CCGGGCAGATATCCAGCTGGTGGAAATCCTTCTGGAGGATACGGTCACCCTACTCGTGGC
CAAGGTGGAGCTTATGGCAGTGGTCGATACCCACCTCAAGGAAGGGGTACCCAATACAGT
TCAGGAGGAATGCCAGGAAGCAGTGGTCCCCGGGGAGTTGGAGGCCCAAATTATCCCCAC
GGTGCCCCATATGGGTCTTCTGGCACTGGACGTGGCTCAAATGTGAATCGCAATCAACAA
CAATACAACTGGCAGCAGTAA