Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015188
CDS Infomation

pacid=37453142 polypeptide=PGSC0003DMP400010520 locus=PGSC0003DMG402005932 ID=PGSC0003DMT400015188.v4.03 annot-version=v4.03
Sequence

ATGCAGCCTAATCAACAGCAGCCTTCGAAGCGTCAGCTCCCATTTACGTCGAGTAAACCG
CCGTTAGGTGATTACCATCGGTTATCTACTGACCCACTTCAGCCTTCTTCTCAAGAGCCT
GAAGGGATCGTTGTAAAGTCTACTCCACTGAAACGAAAGAGTGGAACAACAAATTACGAA
CAGGGAGTTGGTGCACAGGTGGCAGGTTCTGGAAGTTTCAATGGGAGTAGTCCAATGCAG
ACACCAATTTCAGGGAAAGATGGAAACTCACAGAAAGCACCTAGGACATCAAAGGCCAGA
TCTGCTGCTCAAGCAACCTCAAGTTTAGGATCCCCTTCAGGCAATAATGTTACTCCAGTT
GGTCCTTGCCGCTATGACAACTCCTTAGGTCTCTTAACAAAGAAGTTCATTAACCTGCTC
AAACATGCAAAAGATGGCATCCTAGATTTGAACAAGGCTGCTGATACATTAGAGGTGCAG
AAAAGGCGTATATATGACATTACAAATGTCCTGGAAGGCATTGGTCTGATAGAAAAGAAA
CTCAAAAACATGATCCAATGGAAGGGGTTAGATGTCTTAAGACCGGGGGAAGTTGATGAG
AGTGTTACAAGTTTACAGGCAGGAGTAGAAAATTTGACGATAGAGGAAAGTAGATTAGAT
GAACAGATAAGAAAAATGGAAGAAAGATTGAGGGACCTGAGTGGAGATGAAAATAATAAA
AGATGGCTTTTTGTAACTGAAGATGATATAAAGAGCTTACCTTGTCTTCAGAATGACACA
CTGATAGCTATTAAAGCTCCACATGGCACCAGTTTAGAAGTCCCAGATCCTGATGAGGCT
GTTGATTATCCACAAAGGAGATATAGAATAGTGTTTCGCAGCACCATGGGGCCAATTGAT
GTTTACCTTGTCAGTAAATTCGAGGAAAAGTTCGAAGAGATAAATACTGTTGAGGAACCA
TCAACCATGCCTCCAACATCAGGTTTCATTGAGAATGAAACTGTAACATTGCCTGTTGAT
GATGGTGGAGGAGTTGGTGTTGGGATGGAGGAACAAGAAAATCAAAGAGAGTGTCCAGAT
GCTGGCACTTCCCAGGACTTTGTAAGTGGAATTGTGAAGATTGTTCCAGATGTTGATAAT
GAAGCAGATTACTGGCTGTTGTCAGATGCCGATGTTAGTATCACTGACATGTGGACAGAG
TCTGCTCTTGACTGGAACGCGTTTGATTCAATTAATGAGGATTATTCAATTGCGGATGTT
AGTACTCCACGTGCCCAAACTCCCCCATCTAGTACCACTGAAGTACCTTCTGCGAATACT
ACTGGAAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400010520
PEP Infomation

pacid=37453142 transcript=PGSC0003DMT400015188 locus=PGSC0003DMG402005932 ID=PGSC0003DMT400015188.v4.03 annot-version=v4.03
Sequence

MQPNQQQPSKRQLPFTSSKPPLGDYHRLSTDPLQPSSQEPEGIVVKSTPLKRKSGTTNYE
QGVGAQVAGSGSFNGSSPMQTPISGKDGNSQKAPRTSKARSAAQATSSLGSPSGNNVTPV
GPCRYDNSLGLLTKKFINLLKHAKDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKK
LKNMIQWKGLDVLRPGEVDESVTSLQAGVENLTIEESRLDEQIRKMEERLRDLSGDENNK
RWLFVTEDDIKSLPCLQNDTLIAIKAPHGTSLEVPDPDEAVDYPQRRYRIVFRSTMGPID
VYLVSKFEEKFEEINTVEEPSTMPPTSGFIENETVTLPVDDGGGVGVGMEEQENQRECPD
AGTSQDFVSGIVKIVPDVDNEADYWLLSDADVSITDMWTESALDWNAFDSINEDYSIADV
STPRAQTPPSSTTEVPSANTTGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400015188
Transcript Infomation

pacid=37453142 locus=PGSC0003DMG402005932 ID=PGSC0003DMT400015188.v4.03 annot-version=v4.03
Sequence

ATGCAGCCTAATCAACAGCAGCCTTCGAAGCGTCAGCTCCCATTTACGTCGAGTAAACCG
CCGTTAGGTGATTACCATCGGTTATCTACTGACCCACTTCAGCCTTCTTCTCAAGAGCCT
GAAGGGATCGTTGTAAAGTCTACTCCACTGAAACGAAAGAGTGGAACAACAAATTACGAA
CAGGGAGTTGGTGCACAGGTGGCAGGTTCTGGAAGTTTCAATGGGAGTAGTCCAATGCAG
ACACCAATTTCAGGGAAAGATGGAAACTCACAGAAAGCACCTAGGACATCAAAGGCCAGA
TCTGCTGCTCAAGCAACCTCAAGTTTAGGATCCCCTTCAGGCAATAATGTTACTCCAGTT
GGTCCTTGCCGCTATGACAACTCCTTAGGTCTCTTAACAAAGAAGTTCATTAACCTGCTC
AAACATGCAAAAGATGGCATCCTAGATTTGAACAAGGCTGCTGATACATTAGAGGTGCAG
AAAAGGCGTATATATGACATTACAAATGTCCTGGAAGGCATTGGTCTGATAGAAAAGAAA
CTCAAAAACATGATCCAATGGAAGGGGTTAGATGTCTTAAGACCGGGGGAAGTTGATGAG
AGTGTTACAAGTTTACAGGCAGGAGTAGAAAATTTGACGATAGAGGAAAGTAGATTAGAT
GAACAGATAAGAAAAATGGAAGAAAGATTGAGGGACCTGAGTGGAGATGAAAATAATAAA
AGATGGCTTTTTGTAACTGAAGATGATATAAAGAGCTTACCTTGTCTTCAGAATGACACA
CTGATAGCTATTAAAGCTCCACATGGCACCAGTTTAGAAGTCCCAGATCCTGATGAGGCT
GTTGATTATCCACAAAGGAGATATAGAATAGTGTTTCGCAGCACCATGGGGCCAATTGAT
GTTTACCTTGTCAGTAAATTCGAGGAAAAGTTCGAAGAGATAAATACTGTTGAGGAACCA
TCAACCATGCCTCCAACATCAGGTTTCATTGAGAATGAAACTGTAACATTGCCTGTTGAT
GATGGTGGAGGAGTTGGTGTTGGGATGGAGGAACAAGAAAATCAAAGAGAGTGTCCAGAT
GCTGGCACTTCCCAGGACTTTGTAAGTGGAATTGTGAAGATTGTTCCAGATGTTGATAAT
GAAGCAGATTACTGGCTGTTGTCAGATGCCGATGTTAGTATCACTGACATGTGGACAGAG
TCTGCTCTTGACTGGAACGCGTTTGATTCAATTAATGAGGATTATTCAATTGCGGATGTT
AGTACTCCACGTGCCCAAACTCCCCCATCTAGTACCACTGAAGTACCTTCTGCGAATACT
ACTGGAAGCTGA