Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015183
CDS Infomation

pacid=37452558 polypeptide=PGSC0003DMP400010515 locus=PGSC0003DMG400005930 ID=PGSC0003DMT400015183.v4.03 annot-version=v4.03
Sequence

ATGTACTATCAAGGAACCTCGGATAATAATATACAAGCTGATCATCAACAACATCATAAT
CATGGGAATAGTAGTAATAATAATAATATTCAGACGCTTTATTTGATGAACCCTAACAAT
TATATGCAAGGCTACACTACTTCTGACACACAGCAGCAGCAGCAGTTACTTTTCCTGAAT
TCTTCACCAGCAGGAAGCAACGCGCTTTGCCATGCGAATATACAACACGCGCCGCTGCAA
CAGCAGCACTTTGTCGGTGTGCCTCTTCCGGCAGTAAGTTTGCACGATCAGATCAATCAT
CATGGACTTTTACAGCGTATGTGGAACAACCAAGATCAATCTCAGCAGGTGATAGTACCA
TCGTCGACGGGGGTTTCTGCCACGTCATGTGGCGGGATCACCACGGACTTGGCGTCTCAA
TTGGCGTTTCAGAGGCCGATTCCGACACCACAACACCGACAGCAGCAGCAACAACAGCAA
GGCGGTCTATCTCTAAGCCTTTCTCCTCAGCAACAACAGCAAATTAGTTTCAATAACAAT
ATTTCATCCTCATCACCAAGGACAAATAATGTTACTATTAGAGGAACATTAGATGGAAGT
TCTAGCAACATGGTTTTAGGCTCTAAGTATCTGAAAGCTGCACAAGAGCTTCTTGATGAA
GTTGTTAATATTGTTGGAAAAAGCATCAAAGGAGATGATCAAAAGAAGGATAATTCAATG
CCTTTGGCTAGTGATGTCAACACTAATAGTTCTGGTGGTGGTGGTGGTGGTGAAAGTAGC
AGCAGGCAGAAAAATGAAGTTGCTATTGAGCTTACAACTGCTCAAAGACAAGAACTTCAA
ATGAAAAAAGCCAAGCTTCTTGCCATGCTTGAAGAGGTGGAGCAAAGGTACAGACAGTAC
CATCACCAAATGCAAATAATTGTATCATCATTTGAGCAAGTAGCAGGAATTGGTTCAGCC
AAATCATACACTCAATTAGCTTTGCATGCAATTTCGAAGCAATTCAGATGCCTAAAGGAT
GCAATTGCTGAGCAAGTAAAGGCGACGAGCAAGAGTTTAGGTGAAGAGGAAGGCTTAGTA
GGGAAAATCGAAGGCTCAAGACTCAAATTTGTGGACCATCATCTAAGGCAACAACGCGCG
CTGCAACAGCTAGGAATGATGCAACCAAATGCTTGGAGACCCCAAAGAGGTTTACCTGAA
AGAGCTGTCTCTGTCCTTCGTGCTTGGCTTTTCGAGCATTTTCTTCATCCTTACCCAAAG
GATTCAGACAAAATCATGCTTGCTAAGCAAACGGGGCTAACAAGGAGCCAGGTCTCTAAC
TGGTTCATAAATGCTCGAGTTCGATTATGGAAGCCAATGGTAGAAGAAATGTACTTGGAA
GAAGTGAAGAATCAAGAACAAAACAGTACTAATACTTCAGGAGATAACAAAAACAAAGAG
GCTCCAAATGAAGAGAAACATCCAATTATTACTAGCAGCTTATTACAAGATGGTATTACT
ACTACTCAAGCAGAAATTTCTACCTCAACTATTTCAACTTCCCCTACTGCAGGTGCTTCA
CTTCATCATGCTCACAATTTCTCCTTCCTTGGTTCATTCAACATGGATAATACTACTACT
ACTACTGTTGATCATATTGAAAACAACGCGAAAAAGCAAAGAAATGACATGCACAAGTTT
TCTCCAAGTAGTATTCTTTCATCTGTTGACATGGAAGCCAAAGCTAGAGAATCATCAAAT
AAAGGGTTTACTAATCCTTTAATGGCAGCATACGCGATGGGAGATTTTGGAAGGTTTGAT
CCTCATGATCAACAAATCACCGCGAATTTTCATGGAAATAATGGTGTCTCTCTTACTTTA
GGACTTCCTCCTTCTGAAAACCTAGCCATGCCAGTGAGCCAACAAAATTACCTTTCTAAT
GACTTGGGAAGTAGGCCTGAAATGGGGAGTCATTACAATAGAATGGGATATGAAAACATT
GATTTTCAGAGTGGGAATAAGCGATTTCCGACTCAACTATTACCAGATTTTGTTACAGGT
AATCTAGGAACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400010515
PEP Infomation

pacid=37452558 transcript=PGSC0003DMT400015183 locus=PGSC0003DMG400005930 ID=PGSC0003DMT400015183.v4.03 annot-version=v4.03
Sequence

MYYQGTSDNNIQADHQQHHNHGNSSNNNNIQTLYLMNPNNYMQGYTTSDTQQQQQLLFLN
SSPAGSNALCHANIQHAPLQQQHFVGVPLPAVSLHDQINHHGLLQRMWNNQDQSQQVIVP
SSTGVSATSCGGITTDLASQLAFQRPIPTPQHRQQQQQQQGGLSLSLSPQQQQQISFNNN
ISSSSPRTNNVTIRGTLDGSSSNMVLGSKYLKAAQELLDEVVNIVGKSIKGDDQKKDNSM
PLASDVNTNSSGGGGGGESSSRQKNEVAIELTTAQRQELQMKKAKLLAMLEEVEQRYRQY
HHQMQIIVSSFEQVAGIGSAKSYTQLALHAISKQFRCLKDAIAEQVKATSKSLGEEEGLV
GKIEGSRLKFVDHHLRQQRALQQLGMMQPNAWRPQRGLPERAVSVLRAWLFEHFLHPYPK
DSDKIMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEVKNQEQNSTNTSGDNKNKE
APNEEKHPIITSSLLQDGITTTQAEISTSTISTSPTAGASLHHAHNFSFLGSFNMDNTTT
TTVDHIENNAKKQRNDMHKFSPSSILSSVDMEAKARESSNKGFTNPLMAAYAMGDFGRFD
PHDQQITANFHGNNGVSLTLGLPPSENLAMPVSQQNYLSNDLGSRPEMGSHYNRMGYENI
DFQSGNKRFPTQLLPDFVTGNLGT*

Transcript Sequence

Transcript ID

PGSC0003DMT400015183
Transcript Infomation

pacid=37452558 locus=PGSC0003DMG400005930 ID=PGSC0003DMT400015183.v4.03 annot-version=v4.03
Sequence

ATGTACTATCAAGGAACCTCGGATAATAATATACAAGCTGATCATCAACAACATCATAAT
CATGGGAATAGTAGTAATAATAATAATATTCAGACGCTTTATTTGATGAACCCTAACAAT
TATATGCAAGGCTACACTACTTCTGACACACAGCAGCAGCAGCAGTTACTTTTCCTGAAT
TCTTCACCAGCAGGAAGCAACGCGCTTTGCCATGCGAATATACAACACGCGCCGCTGCAA
CAGCAGCACTTTGTCGGTGTGCCTCTTCCGGCAGTAAGTTTGCACGATCAGATCAATCAT
CATGGACTTTTACAGCGTATGTGGAACAACCAAGATCAATCTCAGCAGGTGATAGTACCA
TCGTCGACGGGGGTTTCTGCCACGTCATGTGGCGGGATCACCACGGACTTGGCGTCTCAA
TTGGCGTTTCAGAGGCCGATTCCGACACCACAACACCGACAGCAGCAGCAACAACAGCAA
GGCGGTCTATCTCTAAGCCTTTCTCCTCAGCAACAACAGCAAATTAGTTTCAATAACAAT
ATTTCATCCTCATCACCAAGGACAAATAATGTTACTATTAGAGGAACATTAGATGGAAGT
TCTAGCAACATGGTTTTAGGCTCTAAGTATCTGAAAGCTGCACAAGAGCTTCTTGATGAA
GTTGTTAATATTGTTGGAAAAAGCATCAAAGGAGATGATCAAAAGAAGGATAATTCAATG
CCTTTGGCTAGTGATGTCAACACTAATAGTTCTGGTGGTGGTGGTGGTGGTGAAAGTAGC
AGCAGGCAGAAAAATGAAGTTGCTATTGAGCTTACAACTGCTCAAAGACAAGAACTTCAA
ATGAAAAAAGCCAAGCTTCTTGCCATGCTTGAAGAGGTGGAGCAAAGGTACAGACAGTAC
CATCACCAAATGCAAATAATTGTATCATCATTTGAGCAAGTAGCAGGAATTGGTTCAGCC
AAATCATACACTCAATTAGCTTTGCATGCAATTTCGAAGCAATTCAGATGCCTAAAGGAT
GCAATTGCTGAGCAAGTAAAGGCGACGAGCAAGAGTTTAGGTGAAGAGGAAGGCTTAGTA
GGGAAAATCGAAGGCTCAAGACTCAAATTTGTGGACCATCATCTAAGGCAACAACGCGCG
CTGCAACAGCTAGGAATGATGCAACCAAATGCTTGGAGACCCCAAAGAGGTTTACCTGAA
AGAGCTGTCTCTGTCCTTCGTGCTTGGCTTTTCGAGCATTTTCTTCATCCTTACCCAAAG
GATTCAGACAAAATCATGCTTGCTAAGCAAACGGGGCTAACAAGGAGCCAGGTCTCTAAC
TGGTTCATAAATGCTCGAGTTCGATTATGGAAGCCAATGGTAGAAGAAATGTACTTGGAA
GAAGTGAAGAATCAAGAACAAAACAGTACTAATACTTCAGGAGATAACAAAAACAAAGAG
GCTCCAAATGAAGAGAAACATCCAATTATTACTAGCAGCTTATTACAAGATGGTATTACT
ACTACTCAAGCAGAAATTTCTACCTCAACTATTTCAACTTCCCCTACTGCAGGTGCTTCA
CTTCATCATGCTCACAATTTCTCCTTCCTTGGTTCATTCAACATGGATAATACTACTACT
ACTACTGTTGATCATATTGAAAACAACGCGAAAAAGCAAAGAAATGACATGCACAAGTTT
TCTCCAAGTAGTATTCTTTCATCTGTTGACATGGAAGCCAAAGCTAGAGAATCATCAAAT
AAAGGGTTTACTAATCCTTTAATGGCAGCATACGCGATGGGAGATTTTGGAAGGTTTGAT
CCTCATGATCAACAAATCACCGCGAATTTTCATGGAAATAATGGTGTCTCTCTTACTTTA
GGACTTCCTCCTTCTGAAAACCTAGCCATGCCAGTGAGCCAACAAAATTACCTTTCTAAT
GACTTGGGAAGTAGGCCTGAAATGGGGAGTCATTACAATAGAATGGGATATGAAAACATT
GATTTTCAGAGTGGGAATAAGCGATTTCCGACTCAACTATTACCAGATTTTGTTACAGGT
AATCTAGGAACATGA