Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015182
CDS Infomation

pacid=37453783 polypeptide=PGSC0003DMP400010514 locus=PGSC0003DMG400005929 ID=PGSC0003DMT400015182.v4.03 annot-version=v4.03
Sequence

ATGGATAGCGATACAAACTGGTCGGAGAAGGTCGAGGATCTCGTCGATGCCGGAGAAATC
AATGAAGCCATTTCTTTGTTAGAAGAATTAGTCGCAAAGCTAGAATTTGAGTCCCAAAAC
TCATCAAATTCCCAGCTTCGTCTATCTACTGCTCTACTGGAATTATCGAAGCTCTACTCC
ACTCAAGGCTTATCTTTGCGAGCTGACCAGACGCGCTCTAAGGCATTTCTCATTAAACAG
CAGCAAGAAAATAGGAATGTAAATGCTACTAAGGAGTCAACTGGTGATGGCATTTCAGGT
AGTCGGGTTTCACAAAGTGATAACAAGGATCACGCGAGCTTGCAAATTTATACCTCACAG
AATGATGAAGATGATGATTGGGAAGCTATTGCTGATCGTGCTCCAGATGAATTACTTTCC
CCACAACACTTGCCAGAAGTGTCTAAAATTTCTTTGCAAGATTCGAAAGTTCAAGCCCCC
AAGCGACGTGGAAGGGGTACATTCTCCTATCAGAAGCAGAGTCTCTACAGCGATCAGCAG
TCTGATGAGCCTGCCGTTGATGACATTGAAGATGAAACTGTTTCCGGTACTCCAGAAGGG
AGCTCAGATACAAAAAATTTGAACTATGGAACGCGCCACGTCTTGGTTCTGGCTGATTTC
CCGCCGAGCACTAAAACAAATGACCTAGAGAAACTGTTGGAGAAATTTAAAGACGATGTA
GCAATTCGCTGGGTCAATGATACAGTTGCACTTGCAGTGTTCAGAACACCAGCCCTTGCA
TTAGAGGCCAGCAACTCGATACATTGTCCATTTACAGTGAGGGTATTGTGTGAGGAGAAT
GAACTTTTGAGCTCAATTCCACCAAGAGATCTGGAGCCTCCTCGTAGAAGACCTCAGACA
TCAGCTAGAACCGCCCAGAGGCTGATTGCTCAAAGTATGGGTATAAAGTTGCCTTGTACG
GACTTTGGGTCCAGAGAATATAGGAGACAGGAGGAAGCCAGGAAGAACCGGATAGTTTCA
AGACAAAACTTGAAGAATGATGCTTGGGGTGATGATGACAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400010514
PEP Infomation

pacid=37453783 transcript=PGSC0003DMT400015182 locus=PGSC0003DMG400005929 ID=PGSC0003DMT400015182.v4.03 annot-version=v4.03
Sequence

MDSDTNWSEKVEDLVDAGEINEAISLLEELVAKLEFESQNSSNSQLRLSTALLELSKLYS
TQGLSLRADQTRSKAFLIKQQQENRNVNATKESTGDGISGSRVSQSDNKDHASLQIYTSQ
NDEDDDWEAIADRAPDELLSPQHLPEVSKISLQDSKVQAPKRRGRGTFSYQKQSLYSDQQ
SDEPAVDDIEDETVSGTPEGSSDTKNLNYGTRHVLVLADFPPSTKTNDLEKLLEKFKDDV
AIRWVNDTVALAVFRTPALALEASNSIHCPFTVRVLCEENELLSSIPPRDLEPPRRRPQT
SARTAQRLIAQSMGIKLPCTDFGSREYRRQEEARKNRIVSRQNLKNDAWGDDDN*

Transcript Sequence

Transcript ID

PGSC0003DMT400015182
Transcript Infomation

pacid=37453783 locus=PGSC0003DMG400005929 ID=PGSC0003DMT400015182.v4.03 annot-version=v4.03
Sequence

ATGGATAGCGATACAAACTGGTCGGAGAAGGTCGAGGATCTCGTCGATGCCGGAGAAATC
AATGAAGCCATTTCTTTGTTAGAAGAATTAGTCGCAAAGCTAGAATTTGAGTCCCAAAAC
TCATCAAATTCCCAGCTTCGTCTATCTACTGCTCTACTGGAATTATCGAAGCTCTACTCC
ACTCAAGGCTTATCTTTGCGAGCTGACCAGACGCGCTCTAAGGCATTTCTCATTAAACAG
CAGCAAGAAAATAGGAATGTAAATGCTACTAAGGAGTCAACTGGTGATGGCATTTCAGGT
AGTCGGGTTTCACAAAGTGATAACAAGGATCACGCGAGCTTGCAAATTTATACCTCACAG
AATGATGAAGATGATGATTGGGAAGCTATTGCTGATCGTGCTCCAGATGAATTACTTTCC
CCACAACACTTGCCAGAAGTGTCTAAAATTTCTTTGCAAGATTCGAAAGTTCAAGCCCCC
AAGCGACGTGGAAGGGGTACATTCTCCTATCAGAAGCAGAGTCTCTACAGCGATCAGCAG
TCTGATGAGCCTGCCGTTGATGACATTGAAGATGAAACTGTTTCCGGTACTCCAGAAGGG
AGCTCAGATACAAAAAATTTGAACTATGGAACGCGCCACGTCTTGGTTCTGGCTGATTTC
CCGCCGAGCACTAAAACAAATGACCTAGAGAAACTGTTGGAGAAATTTAAAGACGATGTA
GCAATTCGCTGGGTCAATGATACAGTTGCACTTGCAGTGTTCAGAACACCAGCCCTTGCA
TTAGAGGCCAGCAACTCGATACATTGTCCATTTACAGTGAGGGTATTGTGTGAGGAGAAT
GAACTTTTGAGCTCAATTCCACCAAGAGATCTGGAGCCTCCTCGTAGAAGACCTCAGACA
TCAGCTAGAACCGCCCAGAGGCTGATTGCTCAAAGTATGGGTATAAAGTTGCCTTGTACG
GACTTTGGGTCCAGAGAATATAGGAGACAGGAGGAAGCCAGGAAGAACCGGATAGTTTCA
AGACAAAACTTGAAGAATGATGCTTGGGGTGATGATGACAACTAA