Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015102
CDS Infomation

pacid=37454204 polypeptide=PGSC0003DMP400010456 locus=PGSC0003DMG400005904 ID=PGSC0003DMT400015102.v4.03 annot-version=v4.03
Sequence

ATGAGTATCAAGAACTTCAAGATGGCAAAAGAGGCACAAAAACTTAGTATCGATATCCCA
CTACCCCCAACTAAGATGGGGATAGTGAAACAAGGCATAGTGTCTATTCTTGGAACAGAC
ACTGAAAAAGGAAACAAAGGTGTAGCTGCTTCAATTAGGAGAACCCTTTCAGCTGATATG
TCATCAAAGAAATGGCTATCAGAAAATGGTTTCTCTCCTATGAAGAAAATTGCTTCCTCA
AAAGAACTTGATGTTCTTGGACAAGATGAGATTTGGAGATCAATTCAAAATGGTGGTAAC
AAAACATCAAATGATGTTTGGAGTTCAATTTTAACTCAAAAGAAAGAAGAGTCATCTACA
CTTCCACCTCCTTATATTCATCCTCTTTTGAAAAAATCAACTAGCTCTTTAACTGAAAAA
AGTCTTGAAATTTGTACTGAAAGTCTTGGATCAGAAACTGGTTCTGAAATTATTAGCCTT
GATGATCATCTCCAAAAACAAGAAGAAGAAGAAGAATTGTCCCCTCAAACATTTGAGGAA
TTTCCTGTTGTTAAGTTTAACCATAACAAAAAAACATCATCTCCTCCTCTTCCAAAATCA
TTCCCTCCAACTATTTCTTCCATGGCTGCAGAGGACAAGCCCTCTGTTCATATGCAATCT
CACAGGCAGAATGGTAGATTGATTCTTGAAGCTGTCTCTGTTCCTCCTCAGAATCATTTC
CGCGCTGAACGCGTTGATGGTCGCCTTCTTCTCACCTTAATCATCACCACTTCATCAGAA
ATTGAAGCAGAGGATCAACAAGTGTTTGACGAAATTCAAGAAGTCGAACACAATGAAACT
AATGATGATGATGAGGAAAAAGGAAATGATACAAAAGGGATGCAAATTGTGCTTGAGCAA
AAATCAAGATTGTCAAATGGGAGAATGAATGTGAACACATCAACATTGATGATGAAACAA
CTCATGGGTAATAAATGGCCTAACAAGATGAACAACTCAATTAAATTGATTGAACATGAA
GATGAAATAACCCCAATTATCCCACAAATCCCTCCTCATCTAATCACACCTGAAGCATCT
CCATTCAATGCCTATAACTATTTCTGGAAGAAAAATCCCAATCCCAATCCCAGTGTGACA
ACCATTGTCAACAGTACTACTCCCATTGCCAAAAGTACAACAAAGATAGCAGAGCAGCAA
GATTTGGTGTTAATGAGAGGAAACAAAGGGAACATCAATTATTTGGTGCCTATGTTGAAA
GGATGCAAAGAGAAGAGGAAGTCTCTACTCATTTGGGAGCCATATTGCATTGCAACATCC
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400010456
PEP Infomation

pacid=37454204 transcript=PGSC0003DMT400015102 locus=PGSC0003DMG400005904 ID=PGSC0003DMT400015102.v4.03 annot-version=v4.03
Sequence

MSIKNFKMAKEAQKLSIDIPLPPTKMGIVKQGIVSILGTDTEKGNKGVAASIRRTLSADM
SSKKWLSENGFSPMKKIASSKELDVLGQDEIWRSIQNGGNKTSNDVWSSILTQKKEESST
LPPPYIHPLLKKSTSSLTEKSLEICTESLGSETGSEIISLDDHLQKQEEEEELSPQTFEE
FPVVKFNHNKKTSSPPLPKSFPPTISSMAAEDKPSVHMQSHRQNGRLILEAVSVPPQNHF
RAERVDGRLLLTLIITTSSEIEAEDQQVFDEIQEVEHNETNDDDEEKGNDTKGMQIVLEQ
KSRLSNGRMNVNTSTLMMKQLMGNKWPNKMNNSIKLIEHEDEITPIIPQIPPHLITPEAS
PFNAYNYFWKKNPNPNPSVTTIVNSTTPIAKSTTKIAEQQDLVLMRGNKGNINYLVPMLK
GCKEKRKSLLIWEPYCIATS*

Transcript Sequence

Transcript ID

PGSC0003DMT400015102
Transcript Infomation

pacid=37454204 locus=PGSC0003DMG400005904 ID=PGSC0003DMT400015102.v4.03 annot-version=v4.03
Sequence

ATGAGTATCAAGAACTTCAAGATGGCAAAAGAGGCACAAAAACTTAGTATCGATATCCCA
CTACCCCCAACTAAGATGGGGATAGTGAAACAAGGCATAGTGTCTATTCTTGGAACAGAC
ACTGAAAAAGGAAACAAAGGTGTAGCTGCTTCAATTAGGAGAACCCTTTCAGCTGATATG
TCATCAAAGAAATGGCTATCAGAAAATGGTTTCTCTCCTATGAAGAAAATTGCTTCCTCA
AAAGAACTTGATGTTCTTGGACAAGATGAGATTTGGAGATCAATTCAAAATGGTGGTAAC
AAAACATCAAATGATGTTTGGAGTTCAATTTTAACTCAAAAGAAAGAAGAGTCATCTACA
CTTCCACCTCCTTATATTCATCCTCTTTTGAAAAAATCAACTAGCTCTTTAACTGAAAAA
AGTCTTGAAATTTGTACTGAAAGTCTTGGATCAGAAACTGGTTCTGAAATTATTAGCCTT
GATGATCATCTCCAAAAACAAGAAGAAGAAGAAGAATTGTCCCCTCAAACATTTGAGGAA
TTTCCTGTTGTTAAGTTTAACCATAACAAAAAAACATCATCTCCTCCTCTTCCAAAATCA
TTCCCTCCAACTATTTCTTCCATGGCTGCAGAGGACAAGCCCTCTGTTCATATGCAATCT
CACAGGCAGAATGGTAGATTGATTCTTGAAGCTGTCTCTGTTCCTCCTCAGAATCATTTC
CGCGCTGAACGCGTTGATGGTCGCCTTCTTCTCACCTTAATCATCACCACTTCATCAGAA
ATTGAAGCAGAGGATCAACAAGTGTTTGACGAAATTCAAGAAGTCGAACACAATGAAACT
AATGATGATGATGAGGAAAAAGGAAATGATACAAAAGGGATGCAAATTGTGCTTGAGCAA
AAATCAAGATTGTCAAATGGGAGAATGAATGTGAACACATCAACATTGATGATGAAACAA
CTCATGGGTAATAAATGGCCTAACAAGATGAACAACTCAATTAAATTGATTGAACATGAA
GATGAAATAACCCCAATTATCCCACAAATCCCTCCTCATCTAATCACACCTGAAGCATCT
CCATTCAATGCCTATAACTATTTCTGGAAGAAAAATCCCAATCCCAATCCCAGTGTGACA
ACCATTGTCAACAGTACTACTCCCATTGCCAAAAGTACAACAAAGATAGCAGAGCAGCAA
GATTTGGTGTTAATGAGAGGAAACAAAGGGAACATCAATTATTTGGTGCCTATGTTGAAA
GGATGCAAAGAGAAGAGGAAGTCTCTACTCATTTGGGAGCCATATTGCATTGCAACATCC
TAA