Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015089
CDS Infomation

pacid=37454518 polypeptide=PGSC0003DMP400010446 locus=PGSC0003DMG400005897 ID=PGSC0003DMT400015089.v4.03 annot-version=v4.03
Sequence

ATGGCTGACCCGAATCGACCCGTTACCGGTTACCCCGCCGCCGCCGCTCCTCCTCCAAAT
CACAATGGCTACCCCTCTGCTCAACCTCCACCTCCGGCCACCGCCTACCCTTACGCTGCA
CCACCGTATTACAACAACTACCCCTACCCAGACCCTTACGCGGCCCAGCGTAATACCTTT
CTCCGACGAGTGATAGCTATACTTGTTGCTTCTACGATCATCACCGGAACAATTCTCTTT
GTCATCTGGATTGTCATTCTTCCACGCATCCCTGAGTTTCAAGTCGACTCGCTCTCTGTT
TCTAATCTCAATCTGTCGAATTCCCTCATAACTGCTAACTGGGATCTCCGATTTACTGCC
AGGAATCCAAACAAGAAGCTTACTCTGTACTACGACGAAATTGCTGCTGCGATTTTCTAT
GATTCACTCTCAATTGCTGATACTACGGTTCCACCTTTCTTTATGGATAGGGTAAACGAG
ACTTCCCAGGAGGTTAGATTTGTTGCGTCTGGGGCGTATGTGGAGAAATGGGCATTTGAG
GGTATGGGAAAAGAGAGGGCTGAAAAGGCAAGTGTTAGATTCAATGTGAGGATGGTAGCT
AGGGTTAGTTTTAAAGCAGGAGCTTGGAGAGCAAGGAGGAGGTATTTGAGAGTTTACTGT
GGGGATTTGTCAGTTGGAGTTGCGTTAAACAAGTCTTCTGGGAACTTGCTTGGAGGACAA
AGGCAGTGTGGGGTTGGGCTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400010446
PEP Infomation

pacid=37454518 transcript=PGSC0003DMT400015089 locus=PGSC0003DMG400005897 ID=PGSC0003DMT400015089.v4.03 annot-version=v4.03
Sequence

MADPNRPVTGYPAAAAPPPNHNGYPSAQPPPPATAYPYAAPPYYNNYPYPDPYAAQRNTF
LRRVIAILVASTIITGTILFVIWIVILPRIPEFQVDSLSVSNLNLSNSLITANWDLRFTA
RNPNKKLTLYYDEIAAAIFYDSLSIADTTVPPFFMDRVNETSQEVRFVASGAYVEKWAFE
GMGKERAEKASVRFNVRMVARVSFKAGAWRARRRYLRVYCGDLSVGVALNKSSGNLLGGQ
RQCGVGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400015089
Transcript Infomation

pacid=37454518 locus=PGSC0003DMG400005897 ID=PGSC0003DMT400015089.v4.03 annot-version=v4.03
Sequence

ATGGCTGACCCGAATCGACCCGTTACCGGTTACCCCGCCGCCGCCGCTCCTCCTCCAAAT
CACAATGGCTACCCCTCTGCTCAACCTCCACCTCCGGCCACCGCCTACCCTTACGCTGCA
CCACCGTATTACAACAACTACCCCTACCCAGACCCTTACGCGGCCCAGCGTAATACCTTT
CTCCGACGAGTGATAGCTATACTTGTTGCTTCTACGATCATCACCGGAACAATTCTCTTT
GTCATCTGGATTGTCATTCTTCCACGCATCCCTGAGTTTCAAGTCGACTCGCTCTCTGTT
TCTAATCTCAATCTGTCGAATTCCCTCATAACTGCTAACTGGGATCTCCGATTTACTGCC
AGGAATCCAAACAAGAAGCTTACTCTGTACTACGACGAAATTGCTGCTGCGATTTTCTAT
GATTCACTCTCAATTGCTGATACTACGGTTCCACCTTTCTTTATGGATAGGGTAAACGAG
ACTTCCCAGGAGGTTAGATTTGTTGCGTCTGGGGCGTATGTGGAGAAATGGGCATTTGAG
GGTATGGGAAAAGAGAGGGCTGAAAAGGCAAGTGTTAGATTCAATGTGAGGATGGTAGCT
AGGGTTAGTTTTAAAGCAGGAGCTTGGAGAGCAAGGAGGAGGTATTTGAGAGTTTACTGT
GGGGATTTGTCAGTTGGAGTTGCGTTAAACAAGTCTTCTGGGAACTTGCTTGGAGGACAA
AGGCAGTGTGGGGTTGGGCTGTGA