Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015085
CDS Infomation

pacid=37454431 polypeptide=PGSC0003DMP400010442 locus=PGSC0003DMG400005895 ID=PGSC0003DMT400015085.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCAGCATCACAGTCTCTACCATCAGACAACCTTATTCATGTATTCTGGGAC
GAGGGTATGCTGAAACATGACACAGGAAGAGGTGTTTTCGACACAGGAATTGACCCTGGT
TTCCTTGATGTTTTAGAAAAACACCCAGAAAATTCAGACAGGGTAAAAAACATGTTGTCC
ATTCTCAAAAGGGGTCCTATTTCACCTTTCATTTCTTGGCACCATGGCCGCCCTGCTCAC
ATCTCTGAATTGTCATCTTTCCACACCCAAGAATATGTAAATGAACTAATTGAAGCTGAT
AGAAATGGCGGAAAAGAATTATGTGGAGGGACATTCTTAAATCCTGGGTCATGGGACGCT
GCACTTCTTGCTGCTGGTAGTACATTATCAGCTATGAAGCATATAATTGATGGACATGGG
AAAATCACATATGCATTGGTCAGGCCACCTGGTCATCATGCGCAACCTACTCAAGCTGAT
GGGTATTGCTTCCTTAACAATGCGGGTCTAGCTGTACAACTGGCTTTAGATGGTGGCTGT
AGGAAGGTTGTTGTCCTTGACATTGATGTTCATTACGGGAATGGAACAGCAGAAGGATTT
TATCATTCTGACAAGGTTCTTACTATCTCCCTTCATATGAATCATGGTTCTTGGGGCCCC
TCTCATCCACAGGGTGGAACTGTAGAGGAGCTTGGTGAAGGTGAAGGTTTTGGGTATAAC
CTGAATATACCGTTGCCAAATGGAACTGGGGACAAAGGGTATGGTTATGCCATGCAGCAT
TTAGTTGTTCCTGCTATCGAGAAATTTGAGCCTGATATGATGGTTTTGGTTGTTGGGCAG
GACTCAAGTGCTTTTGATCCAAATGGAAGACAATGCTTGACAATGGAAGGTTACAGAGAG
ATTGGGCGGACAATTCGTGGCATGGCAAACAAGTATAGCAATGGACGGCTCTTGATAGTC
CAAGAAGGTGGATACCATGTTACATATTCAGCCTATTGTCTGCACGCGACTCTTGAAGGT
GTGCTCAATGTTTCAGACCCTCTATTATCTGATCCTATTGCTTATTATCCTGAAGATCAA
TCATTTCCAACCAAGGTAATCGAAGCTATCAAAGACCATTTCTTAAAGATGATTAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400010442
PEP Infomation

pacid=37454431 transcript=PGSC0003DMT400015085 locus=PGSC0003DMG400005895 ID=PGSC0003DMT400015085.v4.03 annot-version=v4.03
Sequence

MASSASQSLPSDNLIHVFWDEGMLKHDTGRGVFDTGIDPGFLDVLEKHPENSDRVKNMLS
ILKRGPISPFISWHHGRPAHISELSSFHTQEYVNELIEADRNGGKELCGGTFLNPGSWDA
ALLAAGSTLSAMKHIIDGHGKITYALVRPPGHHAQPTQADGYCFLNNAGLAVQLALDGGC
RKVVVLDIDVHYGNGTAEGFYHSDKVLTISLHMNHGSWGPSHPQGGTVEELGEGEGFGYN
LNIPLPNGTGDKGYGYAMQHLVVPAIEKFEPDMMVLVVGQDSSAFDPNGRQCLTMEGYRE
IGRTIRGMANKYSNGRLLIVQEGGYHVTYSAYCLHATLEGVLNVSDPLLSDPIAYYPEDQ
SFPTKVIEAIKDHFLKMIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400015085
Transcript Infomation

pacid=37454431 locus=PGSC0003DMG400005895 ID=PGSC0003DMT400015085.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCAGCATCACAGTCTCTACCATCAGACAACCTTATTCATGTATTCTGGGAC
GAGGGTATGCTGAAACATGACACAGGAAGAGGTGTTTTCGACACAGGAATTGACCCTGGT
TTCCTTGATGTTTTAGAAAAACACCCAGAAAATTCAGACAGGGTAAAAAACATGTTGTCC
ATTCTCAAAAGGGGTCCTATTTCACCTTTCATTTCTTGGCACCATGGCCGCCCTGCTCAC
ATCTCTGAATTGTCATCTTTCCACACCCAAGAATATGTAAATGAACTAATTGAAGCTGAT
AGAAATGGCGGAAAAGAATTATGTGGAGGGACATTCTTAAATCCTGGGTCATGGGACGCT
GCACTTCTTGCTGCTGGTAGTACATTATCAGCTATGAAGCATATAATTGATGGACATGGG
AAAATCACATATGCATTGGTCAGGCCACCTGGTCATCATGCGCAACCTACTCAAGCTGAT
GGGTATTGCTTCCTTAACAATGCGGGTCTAGCTGTACAACTGGCTTTAGATGGTGGCTGT
AGGAAGGTTGTTGTCCTTGACATTGATGTTCATTACGGGAATGGAACAGCAGAAGGATTT
TATCATTCTGACAAGGTTCTTACTATCTCCCTTCATATGAATCATGGTTCTTGGGGCCCC
TCTCATCCACAGGGTGGAACTGTAGAGGAGCTTGGTGAAGGTGAAGGTTTTGGGTATAAC
CTGAATATACCGTTGCCAAATGGAACTGGGGACAAAGGGTATGGTTATGCCATGCAGCAT
TTAGTTGTTCCTGCTATCGAGAAATTTGAGCCTGATATGATGGTTTTGGTTGTTGGGCAG
GACTCAAGTGCTTTTGATCCAAATGGAAGACAATGCTTGACAATGGAAGGTTACAGAGAG
ATTGGGCGGACAATTCGTGGCATGGCAAACAAGTATAGCAATGGACGGCTCTTGATAGTC
CAAGAAGGTGGATACCATGTTACATATTCAGCCTATTGTCTGCACGCGACTCTTGAAGGT
GTGCTCAATGTTTCAGACCCTCTATTATCTGATCCTATTGCTTATTATCCTGAAGATCAA
TCATTTCCAACCAAGGTAATCGAAGCTATCAAAGACCATTTCTTAAAGATGATTAGTTGA