Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015083
CDS Infomation

pacid=37453272 polypeptide=PGSC0003DMP400010440 locus=PGSC0003DMG400005894 ID=PGSC0003DMT400015083.v4.03 annot-version=v4.03
Sequence

ATGGGGTACTTGTTGAAAGAGGTATTGAAAACTCTTTGTGGAGTAAACCAGTGGTCTTAT
GCTGTTTTCTGGAAGATAGGTTGCCAAAACACCAAGATTTTAATTTGGGAAGAATCTTAT
TATGAAACTTCAACATTGTCTAATATTCATGGAACTTCTGGAGTTGAGAATCCAGAACTA
GCTTTCCAAGATTGGAGTACTGGTTGGGTTTCTGGTGGAGTTCAAAATTCTCAGCTTCAG
AATCAAGCGGGGGAGAACTTGCATTTGCTTGTAAACAAAATGATGATGGACAATCAGTTC
AATCTAGTAGGAGAAGGACTAATTGGCCGGGCTGCAGTTACTGGGAACCATCAGTGGATT
CTTTCGGAGGGTTTAAGTAGAAATGCTCATCCACCAGAGGTTTTGAAAGAACTTTGCCAA
CAATTTTCAGCTGGCATACAGACAATTTCAGTTATTCCTGTTCTTCCTCATGGCGTTGTT
CAATTTGGTTCATACTTGCACATAATGGAGAATATGGGATTTGTGGAGGATGTGAAAACA
CTAATAAGTCAACTAGGATGTGTCCCTGGTGTTTTATTAACTGATGAGAATGCAACAAAA
GAACCTGCACTAGAAACTTCCAGACCAGTTTACCTTGGGAGTTCAGTCTCAACGGAATAT
TGTGGGAGAGCCAAAGTAATGAACTCTGCTTCAATAATCGACAAGGGTAACTCAATTCAG
ACTGAGGGTTTCGTTGGTCAAACTTCTTTTTCTTTGGTTGATGCAACGTTTCAAGACTCC
AATGTCACTCAAAGTTTTGCTGACTGCCATGATAACCACTTCCACAAGAAAATTTCGCCA
CAAGTGAAACCATGCATGTATATGAACAGTCAGCTGACAAATAATGTCATCAAAACTGAG
GTAATTCCTCCAAACACCGACATATGGAAGAAGCAACAGGCTTCACAATACATTCCAAAG
CCACCGTTCTGTCAGGAATCTTCTGTTGGCTCATTAACTCTAGATAGTGACAGCATAATG
TTAACTGAACAACAGATCTCTGGTGAAAATAGTCTTGCAAAAAGCAATTTAACTCTACCA
AATGTCTTAGGATCATCTCATGGAAGATCCCATCATGGAGTGATTTACAAGTCAATTCCA
CATCCCAATTTTTTCGCCGATGCCAGCAGACCACCACAGAAAATCATCTCTTGCACAGAG
CATATTGGAGATGGGCTTCAAATCGGTTCGTCTGAATTGATGGCATCTTCTAAATATGAT
GTGAACCATGTGATCAATAATCATTCTTTGGATGGACAAGGTGCACAATATTTGTTGGAT
GGGAGCAAGAGAATGGTAGAAAATGATTTGTTTCAAGCACTTGGCGCTATATTAACACAG
AATGAGAATCCAAGTTCAAGTGAGTGCATTCAGGATTTTTATAGTGAAAAAATTGAACAC
GGAGCGCGGAATCCGTTATTTGACAGCGCATATGGAGATGTGCATGTCCAATGTCAGTCT
GGGGATGACTTGTTTGATGTTTTGGGTGCTGATTTTAAGAAAAGTCTTCTAAATGGCAGC
TGGAACAATGAGCAGTGCAATGAACCAAACTCAAACACAAAGGATTGGATTAAAAATAGC
TCGACTTCTACAATAAGTCGGGATGGTTCTTCTACCATCAACCAGGGAAACTCAGATAGT
TGTATGTTCTCCATGACTGGCTTTGACCGTATTTTAGATACTATGGTATCAAATCGTTCT
GCTAAGCAGAGCCTGGATGACAATGTTTCTAGCCGTACGACTATAACAAATTTGAGTAGC
TCTTCTGCCCCTAATGCTTCATGCTCCTATGATCAAGTTGGGGTCTCCAGTCAAATTCAG
GGAGAGCAATTTGTGTCTCCCAAGACACTTCCAAAATCAGGAGCAATGAGTTCTTCTTCA
TACAGATCTGAATGCTCCAAAGAAGACACAGGAATGTATTCTCAAAGTAGTTCAATTTAT
GGATCAACGATCAGTTCATGGGTGGAAAGTGGTTATGACACAAAGCCATCAAGCAGTGTT
TCAACAGGCTATTCTAAAAAGCCAGATGAAATGAGCAAAACAAGTCGCAAAAGGCTTAAA
CCAGGAGAGAATCCTAGGCCAAGGCCAAAAGATCGGCAAATGATCCAAGATCGTGTGAAG
GAACTTCGAGAAATTGTGCCTAATGGGGCAAAGTGTAGCATTGATGCACTGTTCGAACGC
ACGATCAAACACATGCTTTTCTTGCAAAGTGTCACAAAACATGCAGACAAACTAAAACAA
ACTGGAGAGTCAAAGATCATCAGTAAGGAAGGAGGATTGCTTTTAAAGGATAATCTTGAA
GGTGGAGCAACATGGGCATATGAAGTAGGCTCACAGTCTATGGTCTGCCCTATTATAGTT
GAGGATCTAAATCAACCGCGTCAAATGCTTGTGGAGATGCTTTGCGAGGAACGGGGCTTA
TTTTTGGAAATAGCTGACATTATAAGAGGATTGGGCTTGACTATCCTGAAGGGGGTGATG
GAAACAAGGAACGACAAAATATGGGCACAATTTGCTGTAGAGGCAAACAGAGATGTCACA
AGGATGGAGATATTCATCTCACTCGTTCGCCTCTTGGAGCAAACAGCAAAAGGTGGAACA
GAACCTGTCAATGCTGCTGATAACAACACAGCAATGGTGCATTCATTCCACCAAGCAGCG
ACATTACCTGCAACTGGTAGATCATGTAGTTTGCTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400010440
PEP Infomation

pacid=37453272 transcript=PGSC0003DMT400015083 locus=PGSC0003DMG400005894 ID=PGSC0003DMT400015083.v4.03 annot-version=v4.03
Sequence

MGYLLKEVLKTLCGVNQWSYAVFWKIGCQNTKILIWEESYYETSTLSNIHGTSGVENPEL
AFQDWSTGWVSGGVQNSQLQNQAGENLHLLVNKMMMDNQFNLVGEGLIGRAAVTGNHQWI
LSEGLSRNAHPPEVLKELCQQFSAGIQTISVIPVLPHGVVQFGSYLHIMENMGFVEDVKT
LISQLGCVPGVLLTDENATKEPALETSRPVYLGSSVSTEYCGRAKVMNSASIIDKGNSIQ
TEGFVGQTSFSLVDATFQDSNVTQSFADCHDNHFHKKISPQVKPCMYMNSQLTNNVIKTE
VIPPNTDIWKKQQASQYIPKPPFCQESSVGSLTLDSDSIMLTEQQISGENSLAKSNLTLP
NVLGSSHGRSHHGVIYKSIPHPNFFADASRPPQKIISCTEHIGDGLQIGSSELMASSKYD
VNHVINNHSLDGQGAQYLLDGSKRMVENDLFQALGAILTQNENPSSSECIQDFYSEKIEH
GARNPLFDSAYGDVHVQCQSGDDLFDVLGADFKKSLLNGSWNNEQCNEPNSNTKDWIKNS
STSTISRDGSSTINQGNSDSCMFSMTGFDRILDTMVSNRSAKQSLDDNVSSRTTITNLSS
SSAPNASCSYDQVGVSSQIQGEQFVSPKTLPKSGAMSSSSYRSECSKEDTGMYSQSSSIY
GSTISSWVESGYDTKPSSSVSTGYSKKPDEMSKTSRKRLKPGENPRPRPKDRQMIQDRVK
ELREIVPNGAKCSIDALFERTIKHMLFLQSVTKHADKLKQTGESKIISKEGGLLLKDNLE
GGATWAYEVGSQSMVCPIIVEDLNQPRQMLVEMLCEERGLFLEIADIIRGLGLTILKGVM
ETRNDKIWAQFAVEANRDVTRMEIFISLVRLLEQTAKGGTEPVNAADNNTAMVHSFHQAA
TLPATGRSCSLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400015083
Transcript Infomation

pacid=37453272 locus=PGSC0003DMG400005894 ID=PGSC0003DMT400015083.v4.03 annot-version=v4.03
Sequence

ATGGGGTACTTGTTGAAAGAGGTATTGAAAACTCTTTGTGGAGTAAACCAGTGGTCTTAT
GCTGTTTTCTGGAAGATAGGTTGCCAAAACACCAAGATTTTAATTTGGGAAGAATCTTAT
TATGAAACTTCAACATTGTCTAATATTCATGGAACTTCTGGAGTTGAGAATCCAGAACTA
GCTTTCCAAGATTGGAGTACTGGTTGGGTTTCTGGTGGAGTTCAAAATTCTCAGCTTCAG
AATCAAGCGGGGGAGAACTTGCATTTGCTTGTAAACAAAATGATGATGGACAATCAGTTC
AATCTAGTAGGAGAAGGACTAATTGGCCGGGCTGCAGTTACTGGGAACCATCAGTGGATT
CTTTCGGAGGGTTTAAGTAGAAATGCTCATCCACCAGAGGTTTTGAAAGAACTTTGCCAA
CAATTTTCAGCTGGCATACAGACAATTTCAGTTATTCCTGTTCTTCCTCATGGCGTTGTT
CAATTTGGTTCATACTTGCACATAATGGAGAATATGGGATTTGTGGAGGATGTGAAAACA
CTAATAAGTCAACTAGGATGTGTCCCTGGTGTTTTATTAACTGATGAGAATGCAACAAAA
GAACCTGCACTAGAAACTTCCAGACCAGTTTACCTTGGGAGTTCAGTCTCAACGGAATAT
TGTGGGAGAGCCAAAGTAATGAACTCTGCTTCAATAATCGACAAGGGTAACTCAATTCAG
ACTGAGGGTTTCGTTGGTCAAACTTCTTTTTCTTTGGTTGATGCAACGTTTCAAGACTCC
AATGTCACTCAAAGTTTTGCTGACTGCCATGATAACCACTTCCACAAGAAAATTTCGCCA
CAAGTGAAACCATGCATGTATATGAACAGTCAGCTGACAAATAATGTCATCAAAACTGAG
GTAATTCCTCCAAACACCGACATATGGAAGAAGCAACAGGCTTCACAATACATTCCAAAG
CCACCGTTCTGTCAGGAATCTTCTGTTGGCTCATTAACTCTAGATAGTGACAGCATAATG
TTAACTGAACAACAGATCTCTGGTGAAAATAGTCTTGCAAAAAGCAATTTAACTCTACCA
AATGTCTTAGGATCATCTCATGGAAGATCCCATCATGGAGTGATTTACAAGTCAATTCCA
CATCCCAATTTTTTCGCCGATGCCAGCAGACCACCACAGAAAATCATCTCTTGCACAGAG
CATATTGGAGATGGGCTTCAAATCGGTTCGTCTGAATTGATGGCATCTTCTAAATATGAT
GTGAACCATGTGATCAATAATCATTCTTTGGATGGACAAGGTGCACAATATTTGTTGGAT
GGGAGCAAGAGAATGGTAGAAAATGATTTGTTTCAAGCACTTGGCGCTATATTAACACAG
AATGAGAATCCAAGTTCAAGTGAGTGCATTCAGGATTTTTATAGTGAAAAAATTGAACAC
GGAGCGCGGAATCCGTTATTTGACAGCGCATATGGAGATGTGCATGTCCAATGTCAGTCT
GGGGATGACTTGTTTGATGTTTTGGGTGCTGATTTTAAGAAAAGTCTTCTAAATGGCAGC
TGGAACAATGAGCAGTGCAATGAACCAAACTCAAACACAAAGGATTGGATTAAAAATAGC
TCGACTTCTACAATAAGTCGGGATGGTTCTTCTACCATCAACCAGGGAAACTCAGATAGT
TGTATGTTCTCCATGACTGGCTTTGACCGTATTTTAGATACTATGGTATCAAATCGTTCT
GCTAAGCAGAGCCTGGATGACAATGTTTCTAGCCGTACGACTATAACAAATTTGAGTAGC
TCTTCTGCCCCTAATGCTTCATGCTCCTATGATCAAGTTGGGGTCTCCAGTCAAATTCAG
GGAGAGCAATTTGTGTCTCCCAAGACACTTCCAAAATCAGGAGCAATGAGTTCTTCTTCA
TACAGATCTGAATGCTCCAAAGAAGACACAGGAATGTATTCTCAAAGTAGTTCAATTTAT
GGATCAACGATCAGTTCATGGGTGGAAAGTGGTTATGACACAAAGCCATCAAGCAGTGTT
TCAACAGGCTATTCTAAAAAGCCAGATGAAATGAGCAAAACAAGTCGCAAAAGGCTTAAA
CCAGGAGAGAATCCTAGGCCAAGGCCAAAAGATCGGCAAATGATCCAAGATCGTGTGAAG
GAACTTCGAGAAATTGTGCCTAATGGGGCAAAGTGTAGCATTGATGCACTGTTCGAACGC
ACGATCAAACACATGCTTTTCTTGCAAAGTGTCACAAAACATGCAGACAAACTAAAACAA
ACTGGAGAGTCAAAGATCATCAGTAAGGAAGGAGGATTGCTTTTAAAGGATAATCTTGAA
GGTGGAGCAACATGGGCATATGAAGTAGGCTCACAGTCTATGGTCTGCCCTATTATAGTT
GAGGATCTAAATCAACCGCGTCAAATGCTTGTGGAGATGCTTTGCGAGGAACGGGGCTTA
TTTTTGGAAATAGCTGACATTATAAGAGGATTGGGCTTGACTATCCTGAAGGGGGTGATG
GAAACAAGGAACGACAAAATATGGGCACAATTTGCTGTAGAGGCAAACAGAGATGTCACA
AGGATGGAGATATTCATCTCACTCGTTCGCCTCTTGGAGCAAACAGCAAAAGGTGGAACA
GAACCTGTCAATGCTGCTGATAACAACACAGCAATGGTGCATTCATTCCACCAAGCAGCG
ACATTACCTGCAACTGGTAGATCATGTAGTTTGCTGTGA