Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015076
CDS Infomation

pacid=37449723 polypeptide=PGSC0003DMP400010436 locus=PGSC0003DMG400005891 ID=PGSC0003DMT400015076.v4.03 annot-version=v4.03
Sequence

ATGAGTTCATCAAGGTCAACTTCTCTGCATAATGATAAGCATATGCAAACAGAGGGCTCT
GATGACTTGTCGGTTTCGGCAAGAAAACTGGCTTCTACTCTATGGGAAACTAAACTGAAG
GATTTGGAGGAAATGGGTTGGAAAGAAAGAGTTTCCAAATTGGGTTCAGCAGCTCTGCAA
TTTCATGACCCTGTTTCTGAGAGAACGGAGCGATCCAAAGTGCGTAGTCGTCATAGAAGA
AGAAAATCTACCAAGGCTGATCTCTCTAACCAAAATGGTTGCTCAATAGAGCTTGATAGG
ACACAAAATCATGGACAGACTCTAAGCAGACATCATTTGAAGGATGTGTGTCATGGTCTT
ACCACATGTAAAGAGCTGCTGAAAGTTCTGAGTCATGTCTGGAATCTTAAAGATCAGAAA
TCTACATGTTCATCCCTTTTTGCAGCTATAAATACAGAGCTTGACTGGTTGTGTGACGAG
GTGTCTAAATTGATACGCGAACACAGACATAACCACAGTGAAGTTGATGTCCTCTTGAAG
AAGTTTGAAGAAGAAAAGATGGCCTGGAAGGTAAAAGAGCAAGACAAGATTCATACTGCT
ATTACATCTGTAGCCAGGGAGTTCAAGATAGAGAAGAAATTGAGGAAGCAAACTGAGAGA
TTAAATAAGAAGCTTGGTAGAGAACTGGCGGATACAAAGGCATTGCTTTCAAAGGCAGTC
AAAGAACTTGAAGGCGAGAAAAGGGACAGAGATATATTGGAGCAAGTGTGTGATGAATTA
GCCAGAGGTCTCGGAGAAGATAGAGCAGAGATGGAAGAATTGAAGAGACAATCTGCTAAA
ATCCGGGAAGAGGTGGAAATGGAACAGAAAATACTTCAACTAGCTGATGTCATGCGGGAG
GAAAGAGTTCAAATGAAGCTATCAGAAGCCAAATATCAATTTGAGGAGAAAAATACAGTT
GTGGACAAGTTAAGGAATGAACTTGAAGCATATTTGAGATCCAAAAAGGGCCAAGAACAA
GGCTGTGATTCGCTGAATTATGAAACAATCAATGAGCTTGAGAGACATTTGAGAGAAACG
CTTCCAAGCACACACCATTACCGAGATAAAGAGAAGGCAGATGTAGAAATACTCGATAAA
GAAGAGGATGGAGACGAAGGTGATTCAACTGATAGTGATCTTCATTCAATTGAACTAAAC
ATGGGTGATAACAGCAAGAGCCATCAATGGTGCACTGCTCTACAGAATGATCCGAATAGA
TTGTTGATTTCTGATCAAAATAAAGGGAGGAGGTCCATCTCAGAGAAATTCCCAGTGCAA
AGCACTTCCTTAGAAAGGGAAACTTCAGATGGCATTGAGTGGGAGTTCTGCGTGGGAGAG
AAAGAAAACGTGAACACTATAGATGGAGGAATTTCAAACTTTCTTAACAACGGAGGAACA
CCAGAATTCTCTTCTCAAGCTTGGAAAAAGGATCATGCAGATGAGACGGAGAGATATAAG
ATGATCAAGAATCTTTGTGACCGTATCATTTCTGCTTCAAGAATTACAGCCTCTCAAGGC
TTTTCTGGTCCAACCAAGAACTGCAGCCAACAGAAATTTTCTGCCAATGATCCTAACAAA
GTGATGGTGAGGGCTTTGCCATCTTGCAGGGAGAAACTTGAAGGAATACCAGAGATTATT
GCACTGTCTTGCAGGGAGCTACTCGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400010436
PEP Infomation

pacid=37449723 transcript=PGSC0003DMT400015076 locus=PGSC0003DMG400005891 ID=PGSC0003DMT400015076.v4.03 annot-version=v4.03
Sequence

MSSSRSTSLHNDKHMQTEGSDDLSVSARKLASTLWETKLKDLEEMGWKERVSKLGSAALQ
FHDPVSERTERSKVRSRHRRRKSTKADLSNQNGCSIELDRTQNHGQTLSRHHLKDVCHGL
TTCKELLKVLSHVWNLKDQKSTCSSLFAAINTELDWLCDEVSKLIREHRHNHSEVDVLLK
KFEEEKMAWKVKEQDKIHTAITSVAREFKIEKKLRKQTERLNKKLGRELADTKALLSKAV
KELEGEKRDRDILEQVCDELARGLGEDRAEMEELKRQSAKIREEVEMEQKILQLADVMRE
ERVQMKLSEAKYQFEEKNTVVDKLRNELEAYLRSKKGQEQGCDSLNYETINELERHLRET
LPSTHHYRDKEKADVEILDKEEDGDEGDSTDSDLHSIELNMGDNSKSHQWCTALQNDPNR
LLISDQNKGRRSISEKFPVQSTSLERETSDGIEWEFCVGEKENVNTIDGGISNFLNNGGT
PEFSSQAWKKDHADETERYKMIKNLCDRIISASRITASQGFSGPTKNCSQQKFSANDPNK
VMVRALPSCREKLEGIPEIIALSCRELLE*

Transcript Sequence

Transcript ID

PGSC0003DMT400015076
Transcript Infomation

pacid=37449723 locus=PGSC0003DMG400005891 ID=PGSC0003DMT400015076.v4.03 annot-version=v4.03
Sequence

ATGAGTTCATCAAGGTCAACTTCTCTGCATAATGATAAGCATATGCAAACAGAGGGCTCT
GATGACTTGTCGGTTTCGGCAAGAAAACTGGCTTCTACTCTATGGGAAACTAAACTGAAG
GATTTGGAGGAAATGGGTTGGAAAGAAAGAGTTTCCAAATTGGGTTCAGCAGCTCTGCAA
TTTCATGACCCTGTTTCTGAGAGAACGGAGCGATCCAAAGTGCGTAGTCGTCATAGAAGA
AGAAAATCTACCAAGGCTGATCTCTCTAACCAAAATGGTTGCTCAATAGAGCTTGATAGG
ACACAAAATCATGGACAGACTCTAAGCAGACATCATTTGAAGGATGTGTGTCATGGTCTT
ACCACATGTAAAGAGCTGCTGAAAGTTCTGAGTCATGTCTGGAATCTTAAAGATCAGAAA
TCTACATGTTCATCCCTTTTTGCAGCTATAAATACAGAGCTTGACTGGTTGTGTGACGAG
GTGTCTAAATTGATACGCGAACACAGACATAACCACAGTGAAGTTGATGTCCTCTTGAAG
AAGTTTGAAGAAGAAAAGATGGCCTGGAAGGTAAAAGAGCAAGACAAGATTCATACTGCT
ATTACATCTGTAGCCAGGGAGTTCAAGATAGAGAAGAAATTGAGGAAGCAAACTGAGAGA
TTAAATAAGAAGCTTGGTAGAGAACTGGCGGATACAAAGGCATTGCTTTCAAAGGCAGTC
AAAGAACTTGAAGGCGAGAAAAGGGACAGAGATATATTGGAGCAAGTGTGTGATGAATTA
GCCAGAGGTCTCGGAGAAGATAGAGCAGAGATGGAAGAATTGAAGAGACAATCTGCTAAA
ATCCGGGAAGAGGTGGAAATGGAACAGAAAATACTTCAACTAGCTGATGTCATGCGGGAG
GAAAGAGTTCAAATGAAGCTATCAGAAGCCAAATATCAATTTGAGGAGAAAAATACAGTT
GTGGACAAGTTAAGGAATGAACTTGAAGCATATTTGAGATCCAAAAAGGGCCAAGAACAA
GGCTGTGATTCGCTGAATTATGAAACAATCAATGAGCTTGAGAGACATTTGAGAGAAACG
CTTCCAAGCACACACCATTACCGAGATAAAGAGAAGGCAGATGTAGAAATACTCGATAAA
GAAGAGGATGGAGACGAAGGTGATTCAACTGATAGTGATCTTCATTCAATTGAACTAAAC
ATGGGTGATAACAGCAAGAGCCATCAATGGTGCACTGCTCTACAGAATGATCCGAATAGA
TTGTTGATTTCTGATCAAAATAAAGGGAGGAGGTCCATCTCAGAGAAATTCCCAGTGCAA
AGCACTTCCTTAGAAAGGGAAACTTCAGATGGCATTGAGTGGGAGTTCTGCGTGGGAGAG
AAAGAAAACGTGAACACTATAGATGGAGGAATTTCAAACTTTCTTAACAACGGAGGAACA
CCAGAATTCTCTTCTCAAGCTTGGAAAAAGGATCATGCAGATGAGACGGAGAGATATAAG
ATGATCAAGAATCTTTGTGACCGTATCATTTCTGCTTCAAGAATTACAGCCTCTCAAGGC
TTTTCTGGTCCAACCAAGAACTGCAGCCAACAGAAATTTTCTGCCAATGATCCTAACAAA
GTGATGGTGAGGGCTTTGCCATCTTGCAGGGAGAAACTTGAAGGAATACCAGAGATTATT
GCACTGTCTTGCAGGGAGCTACTCGAATGA