Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015066
CDS Infomation

pacid=37452834 polypeptide=PGSC0003DMP400010427 locus=PGSC0003DMG400005886 ID=PGSC0003DMT400015066.v4.03 annot-version=v4.03
Sequence

ATGGAAACTCTTCTCAAGCCTTTTCCATCTCTTTTACTTTCCTCTCCTACATCCCACAGG
TCTATTTTCCAACAAAATCCCCCTTTTCTAAATCCCACCACCAAAAAAAAATCAAGAAAA
TGCCATCTTAGAAACAAAAGTAGTAAACTTTTTTGTAGCTTTCTTGATTTAGCACCCACA
TCAAAGCCAGAGTCTTTTGATGTTAACATCTCATTGGTTGATCCTAATTCAGGTCGGGCT
CAATTCGACGTGATCATCATCGGAGCTGGCCCTGCTGGTCTCAGGCTAGCTGAACAAGTT
TCTAAATATGGTATTAAGGTATGTTGTGTTGACCCTTCACCACTTTCCATGTGGCCAAAT
AATTATGGTGTTTGGGTTGATGAGTTTGAGAATTTAGGATTGGAAGATTGTTTAGATCAT
AAATGGCCTATGACTTGTGTGCATATAAATGATCATAAAACTAAGTATTTGGGAAGACCA
TATGGTAGAGTAAGTAGAAAGAAGCTGAAGTTGAGATTGTTGAATAGTTGTGTTGAAAAC
AGAGTGAAGTTTTATAAAGCTAAGGTTTGGAAAGTGGAACATGAAGAATTTGAGTCTTCA
ATTGTTTGTGATGATGGTAAGAAGATAAGAGGTAGTTTGGTTGTTGATGCAAGTGGTTTT
GCTAGTGATTTTATAGAGTATGACAAGCCAAGAAATCATGGTTATCAAATTGCTCATGGG
GTTTTAGTAGAAGTTGATAATCATCCATTTGATTTGGATAAAATGGTGCTTATGGATTGG
AGGGATTCTCATTTAGGTAATGAGCCATATTTAAGGGTGAATAATGCTAAAGAACCAACA
TTCTTGTATGCAATGCCATTTGATAGAAATTTGGTTTTCTTGGAGGAGACTTCTTTGGTG
AGTCGTCCTGTGTTATCGTATATGGAAGTAAAAAGAAGGATGGTAGCAAGATTAAGGCAT
TTGGGGATCAAAGTGAGAAGTGTTATTGAGGAAGAGAAATGTGTGATCCCTATGGGAGGA
CCACTTCCGCGGATTCCTCAAAATGTTATGGCTATTGGTGGGAATTCGGGGATAGTTCAT
CCATCGACAGGGTACATGGTAGCTAGGAGCATGGCTTTGGCACCAGTACTGGCTGAAGCC
ATCGTCGAGGGGCTTGGCTCAACAAGAATGATAAGAGGGTCTCAACTTTACCATAGAGTT
TGGAATGGTTTGTGGCCTTTGGATAGAAGATGTGTTAGAGAATGTTATTCATTTGGGATG
GAGACATTGTTGAAGCTTGATTTGAAAGGGACTAGGAGATTGTTTGATGCTTTCTTTGAT
CTTGATTCTAAATACTGGCAAGGGTTCCTTTCTTCAAGATTGTCTGTCAAAGAACTTGCT
ATACTCAGCTTGTGTCTTTTTGGACATGGCTCAAATTTGACTAGGTTCGATATTGTTACA
AAATGTCCTGTTCCTTTGGTTAGACTGATTGGCAATCTAGCTATAGAGAGCATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400010427
PEP Infomation

pacid=37452834 transcript=PGSC0003DMT400015066 locus=PGSC0003DMG400005886 ID=PGSC0003DMT400015066.v4.03 annot-version=v4.03
Sequence

METLLKPFPSLLLSSPTSHRSIFQQNPPFLNPTTKKKSRKCHLRNKSSKLFCSFLDLAPT
SKPESFDVNISLVDPNSGRAQFDVIIIGAGPAGLRLAEQVSKYGIKVCCVDPSPLSMWPN
NYGVWVDEFENLGLEDCLDHKWPMTCVHINDHKTKYLGRPYGRVSRKKLKLRLLNSCVEN
RVKFYKAKVWKVEHEEFESSIVCDDGKKIRGSLVVDASGFASDFIEYDKPRNHGYQIAHG
VLVEVDNHPFDLDKMVLMDWRDSHLGNEPYLRVNNAKEPTFLYAMPFDRNLVFLEETSLV
SRPVLSYMEVKRRMVARLRHLGIKVRSVIEEEKCVIPMGGPLPRIPQNVMAIGGNSGIVH
PSTGYMVARSMALAPVLAEAIVEGLGSTRMIRGSQLYHRVWNGLWPLDRRCVRECYSFGM
ETLLKLDLKGTRRLFDAFFDLDSKYWQGFLSSRLSVKELAILSLCLFGHGSNLTRFDIVT
KCPVPLVRLIGNLAIESI*

Transcript Sequence

Transcript ID

PGSC0003DMT400015066
Transcript Infomation

pacid=37452834 locus=PGSC0003DMG400005886 ID=PGSC0003DMT400015066.v4.03 annot-version=v4.03
Sequence

ATGGAAACTCTTCTCAAGCCTTTTCCATCTCTTTTACTTTCCTCTCCTACATCCCACAGG
TCTATTTTCCAACAAAATCCCCCTTTTCTAAATCCCACCACCAAAAAAAAATCAAGAAAA
TGCCATCTTAGAAACAAAAGTAGTAAACTTTTTTGTAGCTTTCTTGATTTAGCACCCACA
TCAAAGCCAGAGTCTTTTGATGTTAACATCTCATTGGTTGATCCTAATTCAGGTCGGGCT
CAATTCGACGTGATCATCATCGGAGCTGGCCCTGCTGGTCTCAGGCTAGCTGAACAAGTT
TCTAAATATGGTATTAAGGTATGTTGTGTTGACCCTTCACCACTTTCCATGTGGCCAAAT
AATTATGGTGTTTGGGTTGATGAGTTTGAGAATTTAGGATTGGAAGATTGTTTAGATCAT
AAATGGCCTATGACTTGTGTGCATATAAATGATCATAAAACTAAGTATTTGGGAAGACCA
TATGGTAGAGTAAGTAGAAAGAAGCTGAAGTTGAGATTGTTGAATAGTTGTGTTGAAAAC
AGAGTGAAGTTTTATAAAGCTAAGGTTTGGAAAGTGGAACATGAAGAATTTGAGTCTTCA
ATTGTTTGTGATGATGGTAAGAAGATAAGAGGTAGTTTGGTTGTTGATGCAAGTGGTTTT
GCTAGTGATTTTATAGAGTATGACAAGCCAAGAAATCATGGTTATCAAATTGCTCATGGG
GTTTTAGTAGAAGTTGATAATCATCCATTTGATTTGGATAAAATGGTGCTTATGGATTGG
AGGGATTCTCATTTAGGTAATGAGCCATATTTAAGGGTGAATAATGCTAAAGAACCAACA
TTCTTGTATGCAATGCCATTTGATAGAAATTTGGTTTTCTTGGAGGAGACTTCTTTGGTG
AGTCGTCCTGTGTTATCGTATATGGAAGTAAAAAGAAGGATGGTAGCAAGATTAAGGCAT
TTGGGGATCAAAGTGAGAAGTGTTATTGAGGAAGAGAAATGTGTGATCCCTATGGGAGGA
CCACTTCCGCGGATTCCTCAAAATGTTATGGCTATTGGTGGGAATTCGGGGATAGTTCAT
CCATCGACAGGGTACATGGTAGCTAGGAGCATGGCTTTGGCACCAGTACTGGCTGAAGCC
ATCGTCGAGGGGCTTGGCTCAACAAGAATGATAAGAGGGTCTCAACTTTACCATAGAGTT
TGGAATGGTTTGTGGCCTTTGGATAGAAGATGTGTTAGAGAATGTTATTCATTTGGGATG
GAGACATTGTTGAAGCTTGATTTGAAAGGGACTAGGAGATTGTTTGATGCTTTCTTTGAT
CTTGATTCTAAATACTGGCAAGGGTTCCTTTCTTCAAGATTGTCTGTCAAAGAACTTGCT
ATACTCAGCTTGTGTCTTTTTGGACATGGCTCAAATTTGACTAGGTTCGATATTGTTACA
AAATGTCCTGTTCCTTTGGTTAGACTGATTGGCAATCTAGCTATAGAGAGCATTTGA