Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400015042
CDS Infomation

pacid=37468925 polypeptide=PGSC0003DMP400010406 locus=PGSC0003DMG400005871 ID=PGSC0003DMT400015042.v4.03 annot-version=v4.03
Sequence

ATGGAAAATGGTATTGGTTTTTGGGCATCTCCAAGGTGTTCATATATAGATGACAATGTT
ATGGAGATTATGAATCTTGATACATATTCTGGGATAGAGCAAATTTTTGCTTCTTATCCA
ACATTTTCGCCTATTAATCCAATGTCCATCGATTATGCACCATTTGAAGAACAGAATACT
GAAACTTTTCCATGTGAAGGGGAAAATTTGATGTTTCAGCAGAATGATGACCAGTTTTGT
TTCGTAGACTCTAGTGAAGAGGCTGATTTGGTTGATGAAATGGGGAAGAATTCGAGCAAA
CAGAATTATGTTACTGATCTTGTTGAGAAATGTGTAATTCCAAAATCACCTTGTCAATCA
CTTGCTGAGAGAATGCTCAAGGCATTAGAATTGTTTAAAAAATCATCTGGTGAGGGAATC
TTGGCTCAGGTTTGGGTTCCGATGAAGAGTGGTGATCAGTACATTTTAAGCACATATGAA
CAGCCATTTCTACTTGATCAGGTGTTAACTGGATATCGAGAGGTGTCGAGGAAATTCACT
TTTGATTTGGAAATGAAACCAGGATCATGTCCAGGTCTTCCTGGTAGAGTTTTTACTTCA
AGAATACCGGAGTGGACATCAAATGTTATGTACTACAAGGAGGCTGAGTATTTACGCGTA
CAATATGCAGTTGACCATGAAGTCCGTGGATCAATTGCTTTACCGATTCTAGAGGATGAT
GGACATGATACACTGTGTTGTGCAGTATTAGAATTAGTCACTGTGAAGGAGAAACCAAAT
TTTGATTTGGAAACAAGTCATGTTTGCCAGGCTCTGCAGGCAGTAAACTTAAGGAGCACA
ACACCTCCTCAATTTTCTTCCCAGAGTCTCTCCAAGAATCAAAGAGCTGCTTTAGCTGAG
GTAAAAGATGTTCTGCGAGCAGTTTGCCATGCTCATAGACTGCCTCTTGCTTTGACATGG
ATTCCCCGTAGTTGTAGAGGAGGTGGTGGTGAAATAAGAGCGCATGCTAGAGAAAGCATT
ACAAGCTTAGATGAAAAAAGTGTATTATGTGTTGAGAATACAGCTTGTTATGTGAGTGAC
AAGGAGATGCAAGGATTTCTTCATGCATGTATGGGACATGATCTCGAAGAAGGACAAGGT
ATTGTTGGGAAATCCCTCCAATCAAACCACCCCTTCTTCTACCCTGATGTGAAAGAGTAC
CATATAAATGAGTATCCACTTGTTCATCATGCACGGAAGTTTGGTCTAAATGCTGCAGTG
GCTATCAGATTACGTAGTGTACTCACCGGTGATGATGATTATGTATTAGAGTTCTTTCTT
CCTGTCGATATGGAGGGAAGCACCGAACAACAGCTTCTCTTAAATAACCTCTCACGCACC
ATGCAGAGAATTTGCAGAAGTCTGAGAACACTATCAGATGCAGAATTAGTTGGAGAAGGG
GGTGAGAAGTGTGGGTTACAGAGTGAATCTGTTCTGAATTTACCACCAATTGACTTGTCA
AGGAAGAGTTCTGGGCAATCATTATTAGACAGCACTTTAGATTTGAGTAAAGCTCCTATA
GATGTATGTGATCCAGAGAGAGCTGGAATAGAAGCTAATATTTCTCACAAACAGGTTTAT
CGCTCAACTTGTCTTCCTTCTGTTGTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400010406
PEP Infomation

pacid=37468925 transcript=PGSC0003DMT400015042 locus=PGSC0003DMG400005871 ID=PGSC0003DMT400015042.v4.03 annot-version=v4.03
Sequence

MENGIGFWASPRCSYIDDNVMEIMNLDTYSGIEQIFASYPTFSPINPMSIDYAPFEEQNT
ETFPCEGENLMFQQNDDQFCFVDSSEEADLVDEMGKNSSKQNYVTDLVEKCVIPKSPCQS
LAERMLKALELFKKSSGEGILAQVWVPMKSGDQYILSTYEQPFLLDQVLTGYREVSRKFT
FDLEMKPGSCPGLPGRVFTSRIPEWTSNVMYYKEAEYLRVQYAVDHEVRGSIALPILEDD
GHDTLCCAVLELVTVKEKPNFDLETSHVCQALQAVNLRSTTPPQFSSQSLSKNQRAALAE
VKDVLRAVCHAHRLPLALTWIPRSCRGGGGEIRAHARESITSLDEKSVLCVENTACYVSD
KEMQGFLHACMGHDLEEGQGIVGKSLQSNHPFFYPDVKEYHINEYPLVHHARKFGLNAAV
AIRLRSVLTGDDDYVLEFFLPVDMEGSTEQQLLLNNLSRTMQRICRSLRTLSDAELVGEG
GEKCGLQSESVLNLPPIDLSRKSSGQSLLDSTLDLSKAPIDVCDPERAGIEANISHKQVY
RSTCLPSVV*

Transcript Sequence

Transcript ID

PGSC0003DMT400015042
Transcript Infomation

pacid=37468925 locus=PGSC0003DMG400005871 ID=PGSC0003DMT400015042.v4.03 annot-version=v4.03
Sequence

ATGGAAAATGGTATTGGTTTTTGGGCATCTCCAAGGTGTTCATATATAGATGACAATGTT
ATGGAGATTATGAATCTTGATACATATTCTGGGATAGAGCAAATTTTTGCTTCTTATCCA
ACATTTTCGCCTATTAATCCAATGTCCATCGATTATGCACCATTTGAAGAACAGAATACT
GAAACTTTTCCATGTGAAGGGGAAAATTTGATGTTTCAGCAGAATGATGACCAGTTTTGT
TTCGTAGACTCTAGTGAAGAGGCTGATTTGGTTGATGAAATGGGGAAGAATTCGAGCAAA
CAGAATTATGTTACTGATCTTGTTGAGAAATGTGTAATTCCAAAATCACCTTGTCAATCA
CTTGCTGAGAGAATGCTCAAGGCATTAGAATTGTTTAAAAAATCATCTGGTGAGGGAATC
TTGGCTCAGGTTTGGGTTCCGATGAAGAGTGGTGATCAGTACATTTTAAGCACATATGAA
CAGCCATTTCTACTTGATCAGGTGTTAACTGGATATCGAGAGGTGTCGAGGAAATTCACT
TTTGATTTGGAAATGAAACCAGGATCATGTCCAGGTCTTCCTGGTAGAGTTTTTACTTCA
AGAATACCGGAGTGGACATCAAATGTTATGTACTACAAGGAGGCTGAGTATTTACGCGTA
CAATATGCAGTTGACCATGAAGTCCGTGGATCAATTGCTTTACCGATTCTAGAGGATGAT
GGACATGATACACTGTGTTGTGCAGTATTAGAATTAGTCACTGTGAAGGAGAAACCAAAT
TTTGATTTGGAAACAAGTCATGTTTGCCAGGCTCTGCAGGCAGTAAACTTAAGGAGCACA
ACACCTCCTCAATTTTCTTCCCAGAGTCTCTCCAAGAATCAAAGAGCTGCTTTAGCTGAG
GTAAAAGATGTTCTGCGAGCAGTTTGCCATGCTCATAGACTGCCTCTTGCTTTGACATGG
ATTCCCCGTAGTTGTAGAGGAGGTGGTGGTGAAATAAGAGCGCATGCTAGAGAAAGCATT
ACAAGCTTAGATGAAAAAAGTGTATTATGTGTTGAGAATACAGCTTGTTATGTGAGTGAC
AAGGAGATGCAAGGATTTCTTCATGCATGTATGGGACATGATCTCGAAGAAGGACAAGGT
ATTGTTGGGAAATCCCTCCAATCAAACCACCCCTTCTTCTACCCTGATGTGAAAGAGTAC
CATATAAATGAGTATCCACTTGTTCATCATGCACGGAAGTTTGGTCTAAATGCTGCAGTG
GCTATCAGATTACGTAGTGTACTCACCGGTGATGATGATTATGTATTAGAGTTCTTTCTT
CCTGTCGATATGGAGGGAAGCACCGAACAACAGCTTCTCTTAAATAACCTCTCACGCACC
ATGCAGAGAATTTGCAGAAGTCTGAGAACACTATCAGATGCAGAATTAGTTGGAGAAGGG
GGTGAGAAGTGTGGGTTACAGAGTGAATCTGTTCTGAATTTACCACCAATTGACTTGTCA
AGGAAGAGTTCTGGGCAATCATTATTAGACAGCACTTTAGATTTGAGTAAAGCTCCTATA
GATGTATGTGATCCAGAGAGAGCTGGAATAGAAGCTAATATTTCTCACAAACAGGTTTAT
CGCTCAACTTGTCTTCCTTCTGTTGTCTAG